RNA–Protein interactions for RNA: ENST00000530680.1

SRPRA-204, Transcript of SRP receptor subunit alpha, humanhuman

TSL 4

Gene SRPRA, Length 558 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-204ENST00000530680 C1orf53Q5VUE5 145 aa16.56■□□□□ 0.24
SRPRA-204ENST00000530680 SESTD1Q86VW0 696 aa16.56■□□□□ 0.24
SRPRA-204ENST00000530680 CATSPER3Q86XQ3 398 aa16.56■□□□□ 0.24
SRPRA-204ENST00000530680 C4orf19Q8IY42 314 aa16.56■□□□□ 0.24
SRPRA-204ENST00000530680 LEO1Q8WVC0 666 aaPredicted RBP16.56■□□□□ 0.24
SRPRA-204ENST00000530680 LMBR1Q8WVP7 490 aa16.56■□□□□ 0.24
SRPRA-204ENST00000530680 CLIC6Q96NY7 704 aa16.56■□□□□ 0.24
SRPRA-204ENST00000530680 NACC1Q96RE7 527 aa16.56■□□□□ 0.24
SRPRA-204ENST00000530680 TRMT13Q9NUP7 481 aaKnown RBP16.56■□□□□ 0.24
SRPRA-204ENST00000530680 DDX19AQ9NUU7 478 aaKnown RBP16.56■□□□□ 0.24
SRPRA-204ENST00000530680 FAM13BQ9NYF5 915 aa16.56■□□□□ 0.24
SRPRA-204ENST00000530680 KIAA1024Q9UPX6 916 aa16.56■□□□□ 0.24
SRPRA-204ENST00000530680 DNAH12Q6ZR08 3092 aa16.55■□□□□ 0.24
SRPRA-204ENST00000530680 GRIN2DO15399 1336 aa16.55■□□□□ 0.24
SRPRA-204ENST00000530680 SLC26A4O43511 780 aa16.55■□□□□ 0.24
SRPRA-204ENST00000530680 ZNF862O60290 1169 aa16.55■□□□□ 0.24
SRPRA-204ENST00000530680 B4GALT4O60513 344 aa16.55■□□□□ 0.24
SRPRA-204ENST00000530680 SLITRK3O94933 977 aa16.55■□□□□ 0.24
SRPRA-204ENST00000530680 CLTBP09497 229 aa16.55■□□□□ 0.24
SRPRA-204ENST00000530680 MUTP22033 750 aa16.55■□□□□ 0.24
SRPRA-204ENST00000530680 CDC25AP30304 524 aa16.55■□□□□ 0.24
SRPRA-204ENST00000530680 POLGP54098 1239 aaPredicted RBP16.55■□□□□ 0.24
SRPRA-204ENST00000530680 TLE2Q04725 743 aa16.55■□□□□ 0.24
SRPRA-204ENST00000530680 GRIN1Q05586 938 aa16.55■□□□□ 0.24
SRPRA-204ENST00000530680 SNX17Q15036 470 aa16.55■□□□□ 0.24
SRPRA-204ENST00000530680 SPECC1Q5M775 1068 aa16.55■□□□□ 0.24
SRPRA-204ENST00000530680 PLA2G4FQ68DD2 849 aa16.55■□□□□ 0.24
SRPRA-204ENST00000530680 GDF6Q6KF10 455 aaPredicted RBP16.55■□□□□ 0.24
SRPRA-204ENST00000530680 RETREG2Q8NC44 543 aa16.55■□□□□ 0.24
SRPRA-204ENST00000530680 SYMPKQ92797 1274 aaKnown RBP16.55■□□□□ 0.24
SRPRA-204ENST00000530680 CHAMP1Q96JM3 812 aa16.55■□□□□ 0.24
SRPRA-204ENST00000530680 CEP170P1Q96L14 293 aa16.55■□□□□ 0.24
SRPRA-204ENST00000530680 HSD17B14Q9BPX1 270 aa16.55■□□□□ 0.24
SRPRA-204ENST00000530680 GDPD2Q9HCC8 539 aa16.55■□□□□ 0.24
SRPRA-204ENST00000530680 EVPLQ92817 2033 aa16.55■□□□□ 0.24
SRPRA-204ENST00000530680 ARHGEF35A5YM69 484 aa16.54■□□□□ 0.24
SRPRA-204ENST00000530680 SSBP05455 408 aaKnown RBP eCLIP16.54■□□□□ 0.24
SRPRA-204ENST00000530680 ANKRD33Q7Z3H0 272 aa16.54■□□□□ 0.24
SRPRA-204ENST00000530680 RSPH3Q86UC2 560 aa16.54■□□□□ 0.24
SRPRA-204ENST00000530680 FAM126BQ8IXS8 530 aa16.54■□□□□ 0.24
SRPRA-204ENST00000530680 METTL13Q8N6R0 699 aa16.54■□□□□ 0.24
SRPRA-204ENST00000530680 SLC43A3Q8NBI5 491 aa16.54■□□□□ 0.24
SRPRA-204ENST00000530680 PIGOQ8TEQ8 1089 aa16.54■□□□□ 0.24
SRPRA-204ENST00000530680 TRAPPC12Q8WVT3 735 aa16.54■□□□□ 0.24
SRPRA-204ENST00000530680 SLC7A3Q8WY07 619 aa16.54■□□□□ 0.24
SRPRA-204ENST00000530680 TOX2Q96NM4 488 aa16.54■□□□□ 0.24
SRPRA-204ENST00000530680 PLIN2Q99541 437 aa16.54■□□□□ 0.24
SRPRA-204ENST00000530680 JPH2Q9BR39 696 aaPredicted RBP16.54■□□□□ 0.24
SRPRA-204ENST00000530680 TRPV6Q9H1D0 765 aa16.54■□□□□ 0.24
SRPRA-204ENST00000530680 TMEM39AQ9NV64 488 aa16.54■□□□□ 0.24
SRPRA-204ENST00000530680 RCOR1Q9UKL0 485 aa16.54■□□□□ 0.24
SRPRA-204ENST00000530680 DNM3Q9UQ16 869 aa16.54■□□□□ 0.24
SRPRA-204ENST00000530680 TMEM150BA6NC51 233 aa16.53■□□□□ 0.24
SRPRA-204ENST00000530680 M0QZ92 97 aa16.53■□□□□ 0.24
SRPRA-204ENST00000530680 LYPLA2O95372 231 aa16.53■□□□□ 0.24
SRPRA-204ENST00000530680 SPATA31C1P0DKV0 1188 aa16.53■□□□□ 0.24
SRPRA-204ENST00000530680 CYP2C9P11712 490 aa16.53■□□□□ 0.24
SRPRA-204ENST00000530680 ATP4AP20648 1035 aa16.53■□□□□ 0.24
SRPRA-204ENST00000530680 TMOD1P28289 359 aa16.53■□□□□ 0.24
SRPRA-204ENST00000530680 CDK7P50613 346 aa16.53■□□□□ 0.24
SRPRA-204ENST00000530680 EXOC8Q8IYI6 725 aa16.53■□□□□ 0.24
SRPRA-204ENST00000530680 ZNF579Q8NAF0 562 aaKnown RBP16.53■□□□□ 0.24
SRPRA-204ENST00000530680 GBP4Q96PP9 640 aa16.53■□□□□ 0.24
SRPRA-204ENST00000530680 MAP7D2Q96T17 732 aa16.53■□□□□ 0.24
SRPRA-204ENST00000530680 FAM49AQ9H0Q0 323 aaPredicted RBP16.53■□□□□ 0.24
SRPRA-204ENST00000530680 CYP26B1Q9NR63 512 aa16.53■□□□□ 0.24
SRPRA-204ENST00000530680 ANKEF1Q9NU02 776 aa16.53■□□□□ 0.24
SRPRA-204ENST00000530680 WRAP73Q9P2S5 460 aaPredicted RBP16.53■□□□□ 0.24
SRPRA-204ENST00000530680 PCDHA7Q9UN72 937 aa16.53■□□□□ 0.24
SRPRA-204ENST00000530680 PPME1Q9Y570 386 aa16.53■□□□□ 0.24
SRPRA-204ENST00000530680 TANC1Q9C0D5 1861 aa16.52■□□□□ 0.24
SRPRA-204ENST00000530680 MAGEB2O15479 319 aa16.52■□□□□ 0.24
SRPRA-204ENST00000530680 TREHO43280 583 aa16.52■□□□□ 0.24
SRPRA-204ENST00000530680 RPLP2P05387 115 aaKnown RBP16.52■□□□□ 0.24
SRPRA-204ENST00000530680 RFC5P40937 340 aa16.52■□□□□ 0.24
SRPRA-204ENST00000530680 STAT6P42226 847 aa16.52■□□□□ 0.24
SRPRA-204ENST00000530680 DNM2P50570 870 aa16.52■□□□□ 0.24
SRPRA-204ENST00000530680 BFSP2Q13515 415 aa16.52■□□□□ 0.24
SRPRA-204ENST00000530680 KARSQ15046 597 aaKnown RBP16.52■□□□□ 0.24
SRPRA-204ENST00000530680 RRAGBQ5VZM2 374 aa16.52■□□□□ 0.24
SRPRA-204ENST00000530680 TAF2Q6P1X5 1199 aa16.52■□□□□ 0.24
SRPRA-204ENST00000530680 CCDC73Q6ZRK6 1079 aa16.52■□□□□ 0.24
SRPRA-204ENST00000530680 ANO5Q75V66 913 aa16.52■□□□□ 0.24
SRPRA-204ENST00000530680 EPSTI1Q96J88 318 aa16.52■□□□□ 0.24
SRPRA-204ENST00000530680 SCLT1Q96NL6 688 aa16.52■□□□□ 0.24
SRPRA-204ENST00000530680 SH2D3AQ9BRG2 576 aa16.52■□□□□ 0.24
SRPRA-204ENST00000530680 NIFKQ9BYG3 293 aaKnown RBP16.52■□□□□ 0.24
SRPRA-204ENST00000530680 BMP2KQ9NSY1 1161 aaPredicted RBP16.52■□□□□ 0.24
SRPRA-204ENST00000530680 USO1O60763 962 aaKnown RBP16.51■□□□□ 0.23
SRPRA-204ENST00000530680 PLCG1P19174 1290 aa16.51■□□□□ 0.23
SRPRA-204ENST00000530680 KLRC1P26715 233 aa16.51■□□□□ 0.23
SRPRA-204ENST00000530680 NPEPPSP55786 919 aa16.51■□□□□ 0.23
SRPRA-204ENST00000530680 ZNF200P98182 395 aaPredicted RBP16.51■□□□□ 0.23
SRPRA-204ENST00000530680 MDM2Q00987 491 aaPredicted RBP16.51■□□□□ 0.23
SRPRA-204ENST00000530680 PTK7Q13308 1070 aa16.51■□□□□ 0.23
SRPRA-204ENST00000530680 MTHFD1LQ6UB35 978 aa16.51■□□□□ 0.23
SRPRA-204ENST00000530680 KCTD17Q8N5Z5 321 aa16.51■□□□□ 0.23
SRPRA-204ENST00000530680 PDILTQ8N807 584 aa16.51■□□□□ 0.23
SRPRA-204ENST00000530680 PYM1Q9BRP8 204 aaKnown RBP16.51■□□□□ 0.23
SRPRA-204ENST00000530680 COL25A1Q9BXS0 654 aaPredicted RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms