RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 PADI6Q6TGC4 694 aa13.41□□□□□ -0.26
SCN3B-206ENST00000530277 CATSPER3Q86XQ3 398 aa13.41□□□□□ -0.26
SCN3B-206ENST00000530277 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.41□□□□□ -0.26
SCN3B-206ENST00000530277 MED15Q96RN5 788 aa13.41□□□□□ -0.26
SCN3B-206ENST00000530277 NAP1L3Q99457 506 aaPredicted RBP13.41□□□□□ -0.26
SCN3B-206ENST00000530277 DUSP9Q99956 384 aaKnown RBP13.41□□□□□ -0.26
SCN3B-206ENST00000530277 LXNQ9BS40 222 aa13.41□□□□□ -0.26
SCN3B-206ENST00000530277 PTK2Q05397 1052 aa13.41□□□□□ -0.26
SCN3B-206ENST00000530277 PSMD2Q13200 908 aa13.41□□□□□ -0.26
SCN3B-206ENST00000530277 NAALADL2Q58DX5 795 aa13.41□□□□□ -0.26
SCN3B-206ENST00000530277 PPP1R18Q6NYC8 613 aa13.41□□□□□ -0.26
SCN3B-206ENST00000530277 ANKS4BQ8N8V4 417 aa13.41□□□□□ -0.26
SCN3B-206ENST00000530277 TMEM39BQ9GZU3 492 aa13.41□□□□□ -0.26
SCN3B-206ENST00000530277 ANKZF1Q9H8Y5 726 aa13.41□□□□□ -0.26
SCN3B-206ENST00000530277 VPS37BQ9H9H4 285 aa13.41□□□□□ -0.26
SCN3B-206ENST00000530277 RCCD1A6NED2 376 aa13.4□□□□□ -0.26
SCN3B-206ENST00000530277 FERP16591 822 aa13.4□□□□□ -0.26
SCN3B-206ENST00000530277 POLGP54098 1239 aaPredicted RBP13.4□□□□□ -0.26
SCN3B-206ENST00000530277 DMP1Q13316 513 aaPredicted RBP13.4□□□□□ -0.26
SCN3B-206ENST00000530277 SMAD1Q15797 465 aaKnown RBP13.4□□□□□ -0.26
SCN3B-206ENST00000530277 CCDC63Q8NA47 563 aa13.4□□□□□ -0.26
SCN3B-206ENST00000530277 SLC30A5Q8TAD4 765 aa13.4□□□□□ -0.26
SCN3B-206ENST00000530277 CCDC77Q9BR77 488 aa13.4□□□□□ -0.26
SCN3B-206ENST00000530277 USP20Q9Y2K6 914 aa13.4□□□□□ -0.26
SCN3B-206ENST00000530277 PDS5AQ29RF7 1337 aaKnown RBP13.4□□□□□ -0.26
SCN3B-206ENST00000530277 POC1B-GALNT4F8VUJ3 575 aa13.4□□□□□ -0.26
SCN3B-206ENST00000530277 ZBTB7AO95365 584 aa13.4□□□□□ -0.26
SCN3B-206ENST00000530277 NR1D1P20393 614 aa13.4□□□□□ -0.26
SCN3B-206ENST00000530277 KCNA1Q09470 495 aa13.4□□□□□ -0.26
SCN3B-206ENST00000530277 TBX2Q13207 712 aaPredicted RBP13.4□□□□□ -0.26
SCN3B-206ENST00000530277 BEND6Q5SZJ8 279 aaPredicted RBP13.4□□□□□ -0.26
SCN3B-206ENST00000530277 PPP1R21Q6ZMI0 780 aa13.4□□□□□ -0.26
SCN3B-206ENST00000530277 TRIM51Q9BSJ1 452 aa13.4□□□□□ -0.26
SCN3B-206ENST00000530277 KMT5AQ9NQR1 393 aa13.4□□□□□ -0.26
SCN3B-206ENST00000530277 C1orf112Q9NSG2 853 aa13.4□□□□□ -0.26
SCN3B-206ENST00000530277 NXF1Q9UBU9 619 aaKnown RBP13.4□□□□□ -0.26
SCN3B-206ENST00000530277 UCHL3P15374 230 aa13.4□□□□□ -0.26
SCN3B-206ENST00000530277 PDE6CP51160 858 aa13.4□□□□□ -0.26
SCN3B-206ENST00000530277 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.4□□□□□ -0.26
SCN3B-206ENST00000530277 MKRN1Q9UHC7 482 aaKnown RBP13.4□□□□□ -0.26
SCN3B-206ENST00000530277 GGT7Q9UJ14 662 aa13.4□□□□□ -0.26
SCN3B-206ENST00000530277 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.4□□□□□ -0.26
SCN3B-206ENST00000530277 SRCAPQ6ZRS2 3230 aa13.39□□□□□ -0.27
SCN3B-206ENST00000530277 TMEM150BA6NC51 233 aa13.39□□□□□ -0.27
SCN3B-206ENST00000530277 CTNND1O60716 968 aaKnown RBP13.39□□□□□ -0.27
SCN3B-206ENST00000530277 CYP2C19P33261 490 aa13.39□□□□□ -0.27
SCN3B-206ENST00000530277 NPEPPSP55786 919 aa13.39□□□□□ -0.27
SCN3B-206ENST00000530277 PODNQ7Z5L7 613 aa13.39□□□□□ -0.27
SCN3B-206ENST00000530277 PRMT6Q96LA8 375 aaPredicted RBP13.39□□□□□ -0.27
SCN3B-206ENST00000530277 RMDN3Q96TC7 470 aa13.39□□□□□ -0.27
SCN3B-206ENST00000530277 PLCB1Q9NQ66 1216 aa13.39□□□□□ -0.27
SCN3B-206ENST00000530277 PRR12Q9ULL5 1215 aa13.39□□□□□ -0.27
SCN3B-206ENST00000530277 MKRN3Q13064 507 aaKnown RBP13.39□□□□□ -0.27
SCN3B-206ENST00000530277 PLA2G4FQ68DD2 849 aa13.39□□□□□ -0.27
SCN3B-206ENST00000530277 B4GALNT4Q76KP1 1039 aa13.39□□□□□ -0.27
SCN3B-206ENST00000530277 NCAPG2Q86XI2 1143 aa13.39□□□□□ -0.27
SCN3B-206ENST00000530277 PPP1R14CQ8TAE6 165 aa13.39□□□□□ -0.27
SCN3B-206ENST00000530277 RAB17Q9H0T7 212 aa13.39□□□□□ -0.27
SCN3B-206ENST00000530277 EHD4Q9H223 541 aa13.39□□□□□ -0.27
SCN3B-206ENST00000530277 ZNF148Q9UQR1 794 aa13.39□□□□□ -0.27
SCN3B-206ENST00000530277 GOLGA8KD6RF30 607 aa13.39□□□□□ -0.27
SCN3B-206ENST00000530277 SEC24CP53992 1094 aa13.39□□□□□ -0.27
SCN3B-206ENST00000530277 FUT2Q10981 343 aa13.39□□□□□ -0.27
SCN3B-206ENST00000530277 E2F5Q15329 346 aa13.39□□□□□ -0.27
SCN3B-206ENST00000530277 MTMR8Q96EF0 704 aa13.39□□□□□ -0.27
SCN3B-206ENST00000530277 AGBL1Q96MI9 1066 aa13.39□□□□□ -0.27
SCN3B-206ENST00000530277 NKIRAS1Q9NYS0 192 aa13.39□□□□□ -0.27
SCN3B-206ENST00000530277 EXOC7Q9UPT5 735 aa13.39□□□□□ -0.27
SCN3B-206ENST00000530277 CEP83Q9Y592 693 aa13.39□□□□□ -0.27
SCN3B-206ENST00000530277 EMSYQ7Z589 1322 aa13.39□□□□□ -0.27
SCN3B-206ENST00000530277 MYO1FO00160 1098 aa13.39□□□□□ -0.27
SCN3B-206ENST00000530277 FTLP02792 175 aaPredicted RBP13.39□□□□□ -0.27
SCN3B-206ENST00000530277 SRGAP2CP0DJJ0 459 aa13.39□□□□□ -0.27
SCN3B-206ENST00000530277 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.39□□□□□ -0.27
SCN3B-206ENST00000530277 PPM1EQ8WY54 764 aa13.39□□□□□ -0.27
SCN3B-206ENST00000530277 RUSC1Q9BVN2 902 aa13.39□□□□□ -0.27
SCN3B-206ENST00000530277 IQCGQ9H095 443 aaKnown RBP13.39□□□□□ -0.27
SCN3B-206ENST00000530277 LOC102724159A0A0B4J2E5 919 aa13.38□□□□□ -0.27
SCN3B-206ENST00000530277 TTI1O43156 1089 aa13.38□□□□□ -0.27
SCN3B-206ENST00000530277 CLTAP09496 248 aa13.38□□□□□ -0.27
SCN3B-206ENST00000530277 EN1Q05925 392 aaPredicted RBP13.38□□□□□ -0.27
SCN3B-206ENST00000530277 PWP2Q15269 919 aaKnown RBP13.38□□□□□ -0.27
SCN3B-206ENST00000530277 SCYL2Q6P3W7 929 aa13.38□□□□□ -0.27
SCN3B-206ENST00000530277 GDAP1Q8TB36 358 aa13.38□□□□□ -0.27
SCN3B-206ENST00000530277 TBC1D31Q96DN5 1066 aa13.38□□□□□ -0.27
SCN3B-206ENST00000530277 NT5C1BQ96P26 610 aa13.38□□□□□ -0.27
SCN3B-206ENST00000530277 PSMD1Q99460 953 aa13.38□□□□□ -0.27
SCN3B-206ENST00000530277 GPRC5CQ9NQ84 441 aa13.38□□□□□ -0.27
SCN3B-206ENST00000530277 TTC7AQ9ULT0 858 aaPredicted RBP13.38□□□□□ -0.27
SCN3B-206ENST00000530277 LTN1O94822 1766 aa13.38□□□□□ -0.27
SCN3B-206ENST00000530277 HIP1RO75146 1068 aa13.38□□□□□ -0.27
SCN3B-206ENST00000530277 NEBLO76041 1014 aa13.38□□□□□ -0.27
SCN3B-206ENST00000530277 CYP11B2P19099 503 aa13.38□□□□□ -0.27
SCN3B-206ENST00000530277 KCNJ1P48048 391 aa13.38□□□□□ -0.27
SCN3B-206ENST00000530277 MTMR1Q13613 665 aa13.38□□□□□ -0.27
SCN3B-206ENST00000530277 FOXR1Q6PIV2 292 aa13.38□□□□□ -0.27
SCN3B-206ENST00000530277 LDHDQ86WU2 507 aa13.38□□□□□ -0.27
SCN3B-206ENST00000530277 PNMA5Q96PV4 448 aa13.38□□□□□ -0.27
SCN3B-206ENST00000530277 FAM213AQ9BRX8 229 aa13.38□□□□□ -0.27
SCN3B-206ENST00000530277 KLHL11Q9NVR0 708 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms