RNA–Protein interactions for RNA: ENST00000529608.1

TGFBR3-208, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 5

Gene TGFBR3, Length 785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-208ENST00000529608 PPFIA1Q13136 1202 aa9.8□□□□□ -0.84
TGFBR3-208ENST00000529608 SMAD4Q13485 552 aaKnown RBP9.8□□□□□ -0.84
TGFBR3-208ENST00000529608 GRIK4Q16099 956 aa9.8□□□□□ -0.84
TGFBR3-208ENST00000529608 SMYD5Q6GMV2 418 aa9.8□□□□□ -0.84
TGFBR3-208ENST00000529608 THSD4Q6ZMP0 1018 aa9.8□□□□□ -0.84
TGFBR3-208ENST00000529608 CMTR1Q8N1G2 835 aaKnown RBP9.8□□□□□ -0.84
TGFBR3-208ENST00000529608 SPPL3Q8TCT6 385 aa9.8□□□□□ -0.84
TGFBR3-208ENST00000529608 IGDCC4Q8TDY8 1250 aa9.8□□□□□ -0.84
TGFBR3-208ENST00000529608 TRAPPC12Q8WVT3 735 aa9.8□□□□□ -0.84
TGFBR3-208ENST00000529608 ZFRQ96KR1 1074 aaKnown RBP9.8□□□□□ -0.84
TGFBR3-208ENST00000529608 SENP7Q9BQF6 1050 aa9.8□□□□□ -0.84
TGFBR3-208ENST00000529608 PKD2L1Q9P0L9 805 aa9.8□□□□□ -0.84
TGFBR3-208ENST00000529608 HCSTQ9UBK5 93 aa9.8□□□□□ -0.84
TGFBR3-208ENST00000529608 CD207Q9UJ71 328 aa9.8□□□□□ -0.84
TGFBR3-208ENST00000529608 TUBE1Q9UJT0 475 aa9.8□□□□□ -0.84
TGFBR3-208ENST00000529608 ZNF215Q9UL58 517 aaPredicted RBP9.8□□□□□ -0.84
TGFBR3-208ENST00000529608 SMAPO00193 183 aa9.79□□□□□ -0.84
TGFBR3-208ENST00000529608 EPB41L2O43491 1005 aaKnown RBP9.79□□□□□ -0.84
TGFBR3-208ENST00000529608 PLEKHA8P1O95397 391 aa9.79□□□□□ -0.84
TGFBR3-208ENST00000529608 EYA4O95677 639 aa9.79□□□□□ -0.84
TGFBR3-208ENST00000529608 IGBP1P78318 339 aa9.79□□□□□ -0.84
TGFBR3-208ENST00000529608 WTAPQ15007 396 aa9.79□□□□□ -0.84
TGFBR3-208ENST00000529608 UBE2SQ16763 222 aa9.79□□□□□ -0.84
TGFBR3-208ENST00000529608 PAN2Q504Q3 1202 aaKnown RBP9.79□□□□□ -0.84
TGFBR3-208ENST00000529608 TSHZ1Q6ZSZ6 1077 aa9.79□□□□□ -0.84
TGFBR3-208ENST00000529608 RBM23Q86U06 439 aaKnown RBP9.79□□□□□ -0.84
TGFBR3-208ENST00000529608 KLHL23Q8NBE8 558 aa9.79□□□□□ -0.84
TGFBR3-208ENST00000529608 VN1R2Q8NFZ6 395 aa9.79□□□□□ -0.84
TGFBR3-208ENST00000529608 SMARCC2Q8TAQ2 1214 aa9.79□□□□□ -0.84
TGFBR3-208ENST00000529608 EDAQ92838 391 aa9.79□□□□□ -0.84
TGFBR3-208ENST00000529608 KCNH6Q9H252 994 aa9.79□□□□□ -0.84
TGFBR3-208ENST00000529608 TMX1Q9H3N1 280 aa9.79□□□□□ -0.84
TGFBR3-208ENST00000529608 BARX2Q9UMQ3 279 aaPredicted RBP9.79□□□□□ -0.84
TGFBR3-208ENST00000529608 FAM50BQ9Y247 325 aa9.79□□□□□ -0.84
TGFBR3-208ENST00000529608 PLXNA3P51805 1871 aa9.79□□□□□ -0.84
TGFBR3-208ENST00000529608 hCG_1642624A0A1W2PR95 340 aa9.78□□□□□ -0.84
TGFBR3-208ENST00000529608 LOC730098B7Z3J9 87 aa9.78□□□□□ -0.84
TGFBR3-208ENST00000529608 HIP1O00291 1037 aa9.78□□□□□ -0.84
TGFBR3-208ENST00000529608 PIK3CDO00329 1044 aa9.78□□□□□ -0.84
TGFBR3-208ENST00000529608 NCK2O43639 380 aa9.78□□□□□ -0.84
TGFBR3-208ENST00000529608 INSRRP14616 1297 aa9.78□□□□□ -0.84
TGFBR3-208ENST00000529608 RXRAP19793 462 aa9.78□□□□□ -0.84
TGFBR3-208ENST00000529608 NRIP1P48552 1158 aa9.78□□□□□ -0.84
TGFBR3-208ENST00000529608 NDUFV1P49821 464 aa9.78□□□□□ -0.84
TGFBR3-208ENST00000529608 MRPS6P82932 125 aaKnown RBP9.78□□□□□ -0.84
TGFBR3-208ENST00000529608 TCF15Q12870 199 aa9.78□□□□□ -0.84
TGFBR3-208ENST00000529608 RABEP1Q15276 862 aa9.78□□□□□ -0.84
TGFBR3-208ENST00000529608 NFKBIBQ15653 356 aa9.78□□□□□ -0.84
TGFBR3-208ENST00000529608 TAF2Q6P1X5 1199 aa9.78□□□□□ -0.84
TGFBR3-208ENST00000529608 TRIM67Q6ZTA4 783 aa9.78□□□□□ -0.84
TGFBR3-208ENST00000529608 MB21D2Q8IYB1 491 aaPredicted RBP9.78□□□□□ -0.84
TGFBR3-208ENST00000529608 SRBD1Q8N5C6 995 aaKnown RBP9.78□□□□□ -0.84
TGFBR3-208ENST00000529608 SMRP1Q8NCR6 262 aa9.78□□□□□ -0.84
TGFBR3-208ENST00000529608 POF1BQ8WVV4 589 aa9.78□□□□□ -0.84
TGFBR3-208ENST00000529608 SEPT1Q8WYJ6 367 aa9.78□□□□□ -0.84
TGFBR3-208ENST00000529608 TATDN2Q93075 761 aa9.78□□□□□ -0.84
TGFBR3-208ENST00000529608 P2RX5Q93086 422 aa9.78□□□□□ -0.84
TGFBR3-208ENST00000529608 GPRASP2Q96D09 838 aa9.78□□□□□ -0.84
TGFBR3-208ENST00000529608 PLVAPQ9BX97 442 aa9.78□□□□□ -0.84
TGFBR3-208ENST00000529608 UPF3BQ9BZI7 483 aaKnown RBP9.78□□□□□ -0.84
TGFBR3-208ENST00000529608 FAM49AQ9H0Q0 323 aaPredicted RBP9.78□□□□□ -0.84
TGFBR3-208ENST00000529608 LY9Q9HBG7 655 aa9.78□□□□□ -0.84
TGFBR3-208ENST00000529608 PADI3Q9ULW8 664 aa9.78□□□□□ -0.84
TGFBR3-208ENST00000529608 RWDD3Q9Y3V2 267 aa9.78□□□□□ -0.84
TGFBR3-208ENST00000529608 UBIAD1Q9Y5Z9 338 aa9.78□□□□□ -0.84
TGFBR3-208ENST00000529608 PIEZO1Q92508 2521 aa9.78□□□□□ -0.84
TGFBR3-208ENST00000529608 TMEM221A6NGB7 291 aa9.77□□□□□ -0.85
TGFBR3-208ENST00000529608 M0R296 226 aa9.77□□□□□ -0.85
TGFBR3-208ENST00000529608 PER2O15055 1255 aa9.77□□□□□ -0.85
TGFBR3-208ENST00000529608 GPR37O15354 613 aa9.77□□□□□ -0.85
TGFBR3-208ENST00000529608 MGEA5O60502 916 aa9.77□□□□□ -0.85
TGFBR3-208ENST00000529608 PPFIA3O75145 1194 aa9.77□□□□□ -0.85
TGFBR3-208ENST00000529608 VCPP55072 806 aaKnown RBP9.77□□□□□ -0.85
TGFBR3-208ENST00000529608 COASYQ13057 564 aa9.77□□□□□ -0.85
TGFBR3-208ENST00000529608 CBX2Q14781 532 aaPredicted RBP9.77□□□□□ -0.85
TGFBR3-208ENST00000529608 TMEM266Q2M3C6 531 aa9.77□□□□□ -0.85
TGFBR3-208ENST00000529608 BMP8AQ7Z5Y6 402 aa9.77□□□□□ -0.85
TGFBR3-208ENST00000529608 NLRX1Q86UT6 975 aa9.77□□□□□ -0.85
TGFBR3-208ENST00000529608 RAB11FIP4Q86YS3 637 aa9.77□□□□□ -0.85
TGFBR3-208ENST00000529608 CMTR2Q8IYT2 770 aaKnown RBP9.77□□□□□ -0.85
TGFBR3-208ENST00000529608 ZNF654Q8IZM8 581 aa9.77□□□□□ -0.85
TGFBR3-208ENST00000529608 EFHBQ8N7U6 833 aa9.77□□□□□ -0.85
TGFBR3-208ENST00000529608 CYP2W1Q8TAV3 490 aa9.77□□□□□ -0.85
TGFBR3-208ENST00000529608 MFSD14AQ96MC6 490 aa9.77□□□□□ -0.85
TGFBR3-208ENST00000529608 SPZ1Q9BXG8 430 aa9.77□□□□□ -0.85
TGFBR3-208ENST00000529608 ERAP1Q9NZ08 941 aa9.77□□□□□ -0.85
TGFBR3-208ENST00000529608 CHMP5Q9NZZ3 219 aa9.77□□□□□ -0.85
TGFBR3-208ENST00000529608 USP15Q9Y4E8 981 aaPredicted RBP9.77□□□□□ -0.85
TGFBR3-208ENST00000529608 IGSF9BQ9UPX0 1349 aa9.77□□□□□ -0.85
TGFBR3-208ENST00000529608 EVPLQ92817 2033 aa9.77□□□□□ -0.85
TGFBR3-208ENST00000529608 IBSPP21815 317 aaPredicted RBP9.76□□□□□ -0.85
TGFBR3-208ENST00000529608 CHMLP26374 656 aa9.76□□□□□ -0.85
TGFBR3-208ENST00000529608 ERVFC1P60507 584 aa9.76□□□□□ -0.85
TGFBR3-208ENST00000529608 ZXDAP98168 799 aa9.76□□□□□ -0.85
TGFBR3-208ENST00000529608 TRDNQ13061 729 aa9.76□□□□□ -0.85
TGFBR3-208ENST00000529608 TRAF1Q13077 416 aa9.76□□□□□ -0.85
TGFBR3-208ENST00000529608 PLCB4Q15147 1175 aa9.76□□□□□ -0.85
TGFBR3-208ENST00000529608 XRRA1Q6P2D8 792 aa9.76□□□□□ -0.85
TGFBR3-208ENST00000529608 NUDT18Q6ZVK8 323 aa9.76□□□□□ -0.85
TGFBR3-208ENST00000529608 NPAS4Q8IUM7 802 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms