RNA–Protein interactions for RNA: ENST00000529355.1

CTR9-204, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-204ENST00000529355 BROXQ5VW32 411 aa6.56□□□□□ -1.36
CTR9-204ENST00000529355 MCTP2Q6DN12 878 aa6.56□□□□□ -1.36
CTR9-204ENST00000529355 UNQ6494/PRO21346Q6UXR6 183 aa6.56□□□□□ -1.36
CTR9-204ENST00000529355 EFHBQ8N7U6 833 aa6.56□□□□□ -1.36
CTR9-204ENST00000529355 ZNF496Q96IT1 587 aaPredicted RBP6.56□□□□□ -1.36
CTR9-204ENST00000529355 IFT22Q9H7X7 185 aa6.56□□□□□ -1.36
CTR9-204ENST00000529355 ACSS2Q9NR19 701 aa6.56□□□□□ -1.36
CTR9-204ENST00000529355 SH3D21A4FU49 640 aa6.55□□□□□ -1.36
CTR9-204ENST00000529355 TRIM13O60858 407 aa6.55□□□□□ -1.36
CTR9-204ENST00000529355 KNG1P01042 644 aa6.55□□□□□ -1.36
CTR9-204ENST00000529355 ADCY8P40145 1251 aa6.55□□□□□ -1.36
CTR9-204ENST00000529355 ECE1P42892 770 aa6.55□□□□□ -1.36
CTR9-204ENST00000529355 SARSP49591 514 aaKnown RBP6.55□□□□□ -1.36
CTR9-204ENST00000529355 SLURP1P55000 103 aa6.55□□□□□ -1.36
CTR9-204ENST00000529355 CD83Q01151 205 aa6.55□□□□□ -1.36
CTR9-204ENST00000529355 SLC6A3Q01959 620 aa6.55□□□□□ -1.36
CTR9-204ENST00000529355 TERF2Q15554 542 aa6.55□□□□□ -1.36
CTR9-204ENST00000529355 ATP13A4Q4VNC1 1196 aa6.55□□□□□ -1.36
CTR9-204ENST00000529355 TCERG1LQ5VWI1 586 aa6.55□□□□□ -1.36
CTR9-204ENST00000529355 TRMT10BQ6PF06 316 aaKnown RBP6.55□□□□□ -1.36
CTR9-204ENST00000529355 CARFQ8N187 725 aa6.55□□□□□ -1.36
CTR9-204ENST00000529355 LINC01356Q8N9X3 169 aa6.55□□□□□ -1.36
CTR9-204ENST00000529355 TTC1Q99614 292 aa6.55□□□□□ -1.36
CTR9-204ENST00000529355 ASB1Q9Y576 335 aa6.55□□□□□ -1.36
CTR9-204ENST00000529355 COL4A3BPQ9Y5P4 624 aa6.55□□□□□ -1.36
CTR9-204ENST00000529355 ELL2O00472 640 aaPredicted RBP6.54□□□□□ -1.36
CTR9-204ENST00000529355 CYP17A1P05093 508 aa6.54□□□□□ -1.36
CTR9-204ENST00000529355 TMPRSS15P98073 1019 aa6.54□□□□□ -1.36
CTR9-204ENST00000529355 ALDH6A1Q02252 535 aaKnown RBP6.54□□□□□ -1.36
CTR9-204ENST00000529355 MYBPC3Q14896 1274 aa6.54□□□□□ -1.36
CTR9-204ENST00000529355 CLRN3Q8NCR9 226 aa6.54□□□□□ -1.36
CTR9-204ENST00000529355 TOX2Q96NM4 488 aa6.54□□□□□ -1.36
CTR9-204ENST00000529355 TRIM8Q9BZR9 551 aa6.54□□□□□ -1.36
CTR9-204ENST00000529355 POFUT1Q9H488 388 aa6.54□□□□□ -1.36
CTR9-204ENST00000529355 PCDH12Q9NPG4 1184 aa6.54□□□□□ -1.36
CTR9-204ENST00000529355 ATP8A1Q9Y2Q0 1164 aa6.54□□□□□ -1.36
CTR9-204ENST00000529355 PTPN22Q9Y2R2 807 aa6.54□□□□□ -1.36
CTR9-204ENST00000529355 KLHL18O94889 574 aa6.53□□□□□ -1.36
CTR9-204ENST00000529355 FBXO21O94952 628 aa6.53□□□□□ -1.36
CTR9-204ENST00000529355 PRLP01236 227 aa6.53□□□□□ -1.36
CTR9-204ENST00000529355 ZSCAN22P10073 491 aaPredicted RBP6.53□□□□□ -1.36
CTR9-204ENST00000529355 FNTBP49356 437 aa6.53□□□□□ -1.36
CTR9-204ENST00000529355 NOLC1Q14978 699 aaKnown RBP eCLIP6.53□□□□□ -1.36
CTR9-204ENST00000529355 PDCD1Q15116 288 aa6.53□□□□□ -1.36
CTR9-204ENST00000529355 KANK2Q63ZY3 851 aa6.53□□□□□ -1.36
CTR9-204ENST00000529355 TTLL7Q6ZT98 887 aa6.53□□□□□ -1.36
CTR9-204ENST00000529355 HDGFL2Q7Z4V5 671 aaPredicted RBP6.53□□□□□ -1.36
CTR9-204ENST00000529355 ZNF761Q86XN6 746 aaPredicted RBP6.53□□□□□ -1.36
CTR9-204ENST00000529355 TXNDC5Q8NBS9 432 aaKnown RBP6.53□□□□□ -1.36
CTR9-204ENST00000529355 ATL2Q8NHH9 583 aa6.53□□□□□ -1.36
CTR9-204ENST00000529355 ADAMTS17Q8TE56 1095 aa6.53□□□□□ -1.36
CTR9-204ENST00000529355 SLC5A5Q92911 643 aa6.53□□□□□ -1.36
CTR9-204ENST00000529355 MYL10Q9BUA6 226 aa6.53□□□□□ -1.36
CTR9-204ENST00000529355 PRDM12Q9H4Q4 367 aa6.53□□□□□ -1.36
CTR9-204ENST00000529355 PCDH18Q9HCL0 1135 aa6.53□□□□□ -1.36
CTR9-204ENST00000529355 TOPORSQ9NS56 1045 aaPredicted RBP6.53□□□□□ -1.36
CTR9-204ENST00000529355 NTMQ9P121 344 aa6.53□□□□□ -1.36
CTR9-204ENST00000529355 CDC42EP3Q9UKI2 254 aa6.53□□□□□ -1.36
CTR9-204ENST00000529355 APOL3O95236 402 aa6.52□□□□□ -1.37
CTR9-204ENST00000529355 BMP7P18075 431 aa6.52□□□□□ -1.37
CTR9-204ENST00000529355 BUD31P41223 144 aaPredicted RBP6.52□□□□□ -1.37
CTR9-204ENST00000529355 ANTXR2P58335 489 aa6.52□□□□□ -1.37
CTR9-204ENST00000529355 FAM50AQ14320 339 aaKnown RBP6.52□□□□□ -1.37
CTR9-204ENST00000529355 EPHA7Q15375 998 aa6.52□□□□□ -1.37
CTR9-204ENST00000529355 DDB1Q16531 1140 aa6.52□□□□□ -1.37
CTR9-204ENST00000529355 PTPROQ16827 1216 aa6.52□□□□□ -1.37
CTR9-204ENST00000529355 ZBTB41Q5SVQ8 909 aa6.52□□□□□ -1.37
CTR9-204ENST00000529355 FEZF2Q8TBJ5 459 aa6.52□□□□□ -1.37
CTR9-204ENST00000529355 WDR66Q8TBY9 1149 aa6.52□□□□□ -1.37
CTR9-204ENST00000529355 MAML3Q96JK9 1138 aa6.52□□□□□ -1.37
CTR9-204ENST00000529355 YTHDC1Q96MU7 727 aaKnown RBP6.52□□□□□ -1.37
CTR9-204ENST00000529355 TUBGCP5Q96RT8 1024 aa6.52□□□□□ -1.37
CTR9-204ENST00000529355 BTBD2Q9BX70 525 aa6.52□□□□□ -1.37
CTR9-204ENST00000529355 MSRAQ9UJ68 235 aa6.52□□□□□ -1.37
CTR9-204ENST00000529355 UBA6A0AVT1 1052 aaPredicted RBP6.51□□□□□ -1.37
CTR9-204ENST00000529355 GPR39O43194 453 aa6.51□□□□□ -1.37
CTR9-204ENST00000529355 ZEB2O60315 1214 aa6.51□□□□□ -1.37
CTR9-204ENST00000529355 PRKD3O94806 890 aa6.51□□□□□ -1.37
CTR9-204ENST00000529355 PRPF6O94906 941 aaKnown RBP6.51□□□□□ -1.37
CTR9-204ENST00000529355 CLEC2LP0C7M8 214 aa6.51□□□□□ -1.37
CTR9-204ENST00000529355 CAP1Q01518 475 aa6.51□□□□□ -1.37
CTR9-204ENST00000529355 STILQ15468 1287 aa6.51□□□□□ -1.37
CTR9-204ENST00000529355 PRAMEF9Q5VWM5 478 aa6.51□□□□□ -1.37
CTR9-204ENST00000529355 ZDHHC14Q8IZN3 488 aa6.51□□□□□ -1.37
CTR9-204ENST00000529355 BCL6BQ8N143 479 aaPredicted RBP6.51□□□□□ -1.37
CTR9-204ENST00000529355 PRPF38AQ8NAV1 312 aaKnown RBP6.51□□□□□ -1.37
CTR9-204ENST00000529355 ANO3Q9BYT9 981 aa6.51□□□□□ -1.37
CTR9-204ENST00000529355 OR10A5Q9H207 317 aa6.51□□□□□ -1.37
CTR9-204ENST00000529355 L2HGDHQ9H9P8 463 aa6.51□□□□□ -1.37
CTR9-204ENST00000529355 PHLDB1Q86UU1 1377 aa6.51□□□□□ -1.37
CTR9-204ENST00000529355 CDK11BP21127 795 aaKnown RBP6.5□□□□□ -1.37
CTR9-204ENST00000529355 MOGSQ13724 837 aa6.5□□□□□ -1.37
CTR9-204ENST00000529355 LRRC32Q14392 662 aa6.5□□□□□ -1.37
CTR9-204ENST00000529355 RGL3Q3MIN7 710 aa6.5□□□□□ -1.37
CTR9-204ENST00000529355 WDR72Q3MJ13 1102 aa6.5□□□□□ -1.37
CTR9-204ENST00000529355 TTC38Q5R3I4 469 aa6.5□□□□□ -1.37
CTR9-204ENST00000529355 SLFN12LQ6IEE8 588 aa6.5□□□□□ -1.37
CTR9-204ENST00000529355 GPR155Q7Z3F1 870 aa6.5□□□□□ -1.37
CTR9-204ENST00000529355 C11orf74Q86VG3 221 aa6.5□□□□□ -1.37
CTR9-204ENST00000529355 TMEM151BQ8IW70 566 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms