RNA–Protein interactions for RNA: ENST00000528253.3

PTP4A2-210, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 5

Gene PTP4A2, Length 806 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-210ENST00000528253 PSRC1Q6PGN9 363 aaPredicted RBP8.15□□□□□ -1.1
PTP4A2-210ENST00000528253 PLA2G4DQ86XP0 818 aa8.15□□□□□ -1.1
PTP4A2-210ENST00000528253 CYP2W1Q8TAV3 490 aa8.15□□□□□ -1.1
PTP4A2-210ENST00000528253 CAGE1Q8TC20 777 aa8.15□□□□□ -1.1
PTP4A2-210ENST00000528253 TNPO1Q92973 898 aaKnown RBP8.15□□□□□ -1.1
PTP4A2-210ENST00000528253 RNPC3Q96LT9 517 aaKnown RBP8.15□□□□□ -1.1
PTP4A2-210ENST00000528253 SMARCAD1Q9H4L7 1026 aa8.15□□□□□ -1.1
PTP4A2-210ENST00000528253 AGO4Q9HCK5 861 aaKnown RBP8.15□□□□□ -1.1
PTP4A2-210ENST00000528253 JPH1Q9HDC5 661 aaPredicted RBP8.15□□□□□ -1.1
PTP4A2-210ENST00000528253 IL23AQ9NPF7 189 aa8.15□□□□□ -1.1
PTP4A2-210ENST00000528253 SLC9A2Q9UBY0 812 aa8.15□□□□□ -1.1
PTP4A2-210ENST00000528253 PCDHA4Q9UN74 947 aa8.15□□□□□ -1.1
PTP4A2-210ENST00000528253 TANC1Q9C0D5 1861 aa8.15□□□□□ -1.11
PTP4A2-210ENST00000528253 GSTTP1A0A1W2PQM5 241 aa8.14□□□□□ -1.11
PTP4A2-210ENST00000528253 C17orf102A2RUQ5 167 aa8.14□□□□□ -1.11
PTP4A2-210ENST00000528253 PARNO95453 639 aaKnown RBP8.14□□□□□ -1.11
PTP4A2-210ENST00000528253 SMIM10L2AP0DMW4 78 aa8.14□□□□□ -1.11
PTP4A2-210ENST00000528253 SMIM10L2BP0DMW5 78 aa8.14□□□□□ -1.11
PTP4A2-210ENST00000528253 ACRP10323 421 aa8.14□□□□□ -1.11
PTP4A2-210ENST00000528253 RFX1P22670 979 aa8.14□□□□□ -1.11
PTP4A2-210ENST00000528253 RFC2P35250 354 aa8.14□□□□□ -1.11
PTP4A2-210ENST00000528253 EPHB4P54760 987 aa8.14□□□□□ -1.11
PTP4A2-210ENST00000528253 SETQ01105 290 aaPredicted RBP8.14□□□□□ -1.11
PTP4A2-210ENST00000528253 PTK7Q13308 1070 aa8.14□□□□□ -1.11
PTP4A2-210ENST00000528253 TMEM240Q5SV17 173 aa8.14□□□□□ -1.11
PTP4A2-210ENST00000528253 C9orf50Q5SZB4 431 aa8.14□□□□□ -1.11
PTP4A2-210ENST00000528253 ZNF365Q70YC5 407 aa8.14□□□□□ -1.11
PTP4A2-210ENST00000528253 BLIDQ8IZY5 108 aa8.14□□□□□ -1.11
PTP4A2-210ENST00000528253 NECAB1Q8N987 351 aa8.14□□□□□ -1.11
PTP4A2-210ENST00000528253 RASGRP4Q8TDF6 673 aa8.14□□□□□ -1.11
PTP4A2-210ENST00000528253 GLG1Q92896 1179 aa8.14□□□□□ -1.11
PTP4A2-210ENST00000528253 ATP6V0A1Q93050 837 aa8.14□□□□□ -1.11
PTP4A2-210ENST00000528253 GTF3C6Q969F1 213 aa8.14□□□□□ -1.11
PTP4A2-210ENST00000528253 SCLYQ96I15 445 aa8.14□□□□□ -1.11
PTP4A2-210ENST00000528253 AIFM3Q96NN9 605 aa8.14□□□□□ -1.11
PTP4A2-210ENST00000528253 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.14□□□□□ -1.114e-7■□□□□ 9
PTP4A2-210ENST00000528253 ZNF577Q9BSK1 485 aa8.14□□□□□ -1.11
PTP4A2-210ENST00000528253 MTIF3Q9H2K0 278 aaKnown RBP8.14□□□□□ -1.11
PTP4A2-210ENST00000528253 RNPEPQ9H4A4 650 aa8.14□□□□□ -1.11
PTP4A2-210ENST00000528253 AZI2Q9H6S1 392 aa8.14□□□□□ -1.11
PTP4A2-210ENST00000528253 TBC1D22BQ9NU19 505 aa8.14□□□□□ -1.11
PTP4A2-210ENST00000528253 ERAP1Q9NZ08 941 aa8.14□□□□□ -1.11
PTP4A2-210ENST00000528253 ORC3Q9UBD5 711 aaPredicted RBP8.14□□□□□ -1.11
PTP4A2-210ENST00000528253 TCEAL9Q9UHQ7 104 aa8.14□□□□□ -1.11
PTP4A2-210ENST00000528253 LIMCH1Q9UPQ0 1083 aa8.14□□□□□ -1.11
PTP4A2-210ENST00000528253 UMODL1Q5DID0 1318 aa8.13□□□□□ -1.11
PTP4A2-210ENST00000528253 FAM86B1E9PN63 330 aa8.13□□□□□ -1.11
PTP4A2-210ENST00000528253 IPO5O00410 1097 aaKnown RBP8.13□□□□□ -1.11
PTP4A2-210ENST00000528253 SOX1O00570 391 aaPredicted RBP8.13□□□□□ -1.11
PTP4A2-210ENST00000528253 ATP9BO43861 1147 aa8.13□□□□□ -1.11
PTP4A2-210ENST00000528253 PFKMP08237 780 aa8.13□□□□□ -1.11
PTP4A2-210ENST00000528253 FAM86B2P0C5J1 330 aa8.13□□□□□ -1.11
PTP4A2-210ENST00000528253 IQCF3P0C7M6 154 aa8.13□□□□□ -1.11
PTP4A2-210ENST00000528253 ACTN1P12814 892 aa8.13□□□□□ -1.11
PTP4A2-210ENST00000528253 SELPP16109 830 aa8.13□□□□□ -1.11
PTP4A2-210ENST00000528253 CIITAP33076 1130 aa8.13□□□□□ -1.11
PTP4A2-210ENST00000528253 RBM25P49756 843 aaKnown RBP8.13□□□□□ -1.11
PTP4A2-210ENST00000528253 TRIM29Q14134 588 aa8.13□□□□□ -1.11
PTP4A2-210ENST00000528253 NONOQ15233 471 aaKnown RBP eCLIP8.13□□□□□ -1.11
PTP4A2-210ENST00000528253 PRR16Q569H4 304 aa8.13□□□□□ -1.11
PTP4A2-210ENST00000528253 C16orf59Q7L2K0 433 aa8.13□□□□□ -1.11
PTP4A2-210ENST00000528253 DEFB128Q7Z7B8 93 aa8.13□□□□□ -1.11
PTP4A2-210ENST00000528253 DAGLBQ8NCG7 672 aa8.13□□□□□ -1.11
PTP4A2-210ENST00000528253 TBCKQ8TEA7 893 aa8.13□□□□□ -1.11
PTP4A2-210ENST00000528253 AFAP1L1Q8TED9 768 aa8.13□□□□□ -1.11
PTP4A2-210ENST00000528253 CRYGNQ8WXF5 182 aa8.13□□□□□ -1.11
PTP4A2-210ENST00000528253 ZNF516Q92618 1163 aa8.13□□□□□ -1.11
PTP4A2-210ENST00000528253 ZSCAN31Q96LW9 406 aaPredicted RBP8.13□□□□□ -1.11
PTP4A2-210ENST00000528253 UCN2Q96RP3 112 aa8.13□□□□□ -1.11
PTP4A2-210ENST00000528253 ARHGAP9Q9BRR9 750 aa8.13□□□□□ -1.11
PTP4A2-210ENST00000528253 PHF20Q9BVI0 1012 aa8.13□□□□□ -1.11
PTP4A2-210ENST00000528253 FTOQ9C0B1 505 aaKnown RBP eCLIP8.13□□□□□ -1.11
PTP4A2-210ENST00000528253 WNT8AQ9H1J5 351 aa8.13□□□□□ -1.11
PTP4A2-210ENST00000528253 BRMS1Q9HCU9 246 aa8.13□□□□□ -1.11
PTP4A2-210ENST00000528253 TFIP11Q9UBB9 837 aaKnown RBP8.13□□□□□ -1.11
PTP4A2-210ENST00000528253 KCNJ14Q9UNX9 436 aa8.13□□□□□ -1.11
PTP4A2-210ENST00000528253 EMSYQ7Z589 1322 aa8.12□□□□□ -1.11
PTP4A2-210ENST00000528253 NRCAMQ92823 1304 aa8.12□□□□□ -1.11
PTP4A2-210ENST00000528253 IGLV3-22A0A075B6J6 115 aa8.12□□□□□ -1.11
PTP4A2-210ENST00000528253 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.12□□□□□ -1.11
PTP4A2-210ENST00000528253 CCDC194A0A1B0GVG4 234 aa8.12□□□□□ -1.11
PTP4A2-210ENST00000528253 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.12□□□□□ -1.11
PTP4A2-210ENST00000528253 DDX39AO00148 427 aaKnown RBP8.12□□□□□ -1.11
PTP4A2-210ENST00000528253 NRG2O14511 850 aaPredicted RBP8.12□□□□□ -1.11
PTP4A2-210ENST00000528253 BACH1O14867 736 aa8.12□□□□□ -1.11
PTP4A2-210ENST00000528253 ADAMTS3O15072 1205 aa8.12□□□□□ -1.11
PTP4A2-210ENST00000528253 ATG7O95352 703 aa8.12□□□□□ -1.11
PTP4A2-210ENST00000528253 LARGE1O95461 756 aa8.12□□□□□ -1.11
PTP4A2-210ENST00000528253 CTDNEP1O95476 244 aa8.12□□□□□ -1.11
PTP4A2-210ENST00000528253 CKBP12277 381 aa8.12□□□□□ -1.11
PTP4A2-210ENST00000528253 MARK3P27448 753 aa8.12□□□□□ -1.11
PTP4A2-210ENST00000528253 THPOP40225 353 aa8.12□□□□□ -1.11
PTP4A2-210ENST00000528253 SLC26A2P50443 739 aa8.12□□□□□ -1.11
PTP4A2-210ENST00000528253 STAT5BP51692 787 aa8.12□□□□□ -1.11
PTP4A2-210ENST00000528253 ACTR2P61160 394 aa8.12□□□□□ -1.11
PTP4A2-210ENST00000528253 SMAD3P84022 425 aaKnown RBP8.12□□□□□ -1.11
PTP4A2-210ENST00000528253 ZNF200P98182 395 aaPredicted RBP8.12□□□□□ -1.11
PTP4A2-210ENST00000528253 ITGB3BPQ13352 177 aaPredicted RBP8.12□□□□□ -1.11
PTP4A2-210ENST00000528253 FAM160B1Q5W0V3 765 aa8.12□□□□□ -1.11
PTP4A2-210ENST00000528253 MIS18BP1Q6P0N0 1132 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms