RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 PYGBP11216 843 aa13.52□□□□□ -0.24
TSKU-203ENST00000527881 SP100P23497 879 aaPredicted RBP13.52□□□□□ -0.24
TSKU-203ENST00000527881 TARSP26639 723 aaKnown RBP13.52□□□□□ -0.24
TSKU-203ENST00000527881 PEX5P50542 639 aa13.52□□□□□ -0.24
TSKU-203ENST00000527881 PTK2Q05397 1052 aa13.52□□□□□ -0.24
TSKU-203ENST00000527881 TROAPQ12815 778 aa13.52□□□□□ -0.24
TSKU-203ENST00000527881 VPS36Q86VN1 386 aa13.52□□□□□ -0.24
TSKU-203ENST00000527881 LRRC15Q8TF66 581 aa13.52□□□□□ -0.24
TSKU-203ENST00000527881 ARHGEF2Q92974 986 aaKnown RBP13.52□□□□□ -0.24
TSKU-203ENST00000527881 TGS1Q96RS0 853 aaKnown RBP13.52□□□□□ -0.24
TSKU-203ENST00000527881 TXKP42681 527 aa13.52□□□□□ -0.25
TSKU-203ENST00000527881 LONRF1Q17RB8 773 aa13.52□□□□□ -0.25
TSKU-203ENST00000527881 MTHFD1LQ6UB35 978 aa13.52□□□□□ -0.25
TSKU-203ENST00000527881 SYCP3Q8IZU3 236 aa13.52□□□□□ -0.25
TSKU-203ENST00000527881 STK32AQ8WU08 396 aa13.52□□□□□ -0.25
TSKU-203ENST00000527881 MAIP1Q8WWC4 291 aa13.52□□□□□ -0.25
TSKU-203ENST00000527881 RBM41Q96IZ5 413 aaKnown RBP13.52□□□□□ -0.25
TSKU-203ENST00000527881 WDR35Q9P2L0 1181 aa13.52□□□□□ -0.25
TSKU-203ENST00000527881 COL4A3BPQ9Y5P4 624 aa13.52□□□□□ -0.25
TSKU-203ENST00000527881 DISP2A7MBM2 1401 aa13.52□□□□□ -0.25
TSKU-203ENST00000527881 RBAK-RBAKDNI3L0D1 243 aa13.52□□□□□ -0.25
TSKU-203ENST00000527881 NPTXRO95502 500 aa13.52□□□□□ -0.25
TSKU-203ENST00000527881 ACSL3O95573 720 aa13.52□□□□□ -0.25
TSKU-203ENST00000527881 ABCB4P21439 1286 aa13.52□□□□□ -0.25
TSKU-203ENST00000527881 SERPINB4P48594 390 aa13.52□□□□□ -0.25
TSKU-203ENST00000527881 BARGINQ6ZT62 677 aa13.52□□□□□ -0.25
TSKU-203ENST00000527881 C4orf32Q8N8J7 132 aa13.52□□□□□ -0.25
TSKU-203ENST00000527881 U2AF1L4Q8WU68 220 aaKnown RBP13.52□□□□□ -0.25
TSKU-203ENST00000527881 KIFAP3Q92845 792 aa13.52□□□□□ -0.25
TSKU-203ENST00000527881 BORCS6Q96GS4 357 aa13.52□□□□□ -0.25
TSKU-203ENST00000527881 DCAF5Q96JK2 942 aa13.52□□□□□ -0.25
TSKU-203ENST00000527881 ERP44Q9BS26 406 aa13.52□□□□□ -0.25
TSKU-203ENST00000527881 EDEM3Q9BZQ6 932 aa13.52□□□□□ -0.25
TSKU-203ENST00000527881 CUEDC2Q9H467 287 aa13.52□□□□□ -0.25
TSKU-203ENST00000527881 LMCD1Q9NZU5 365 aa13.52□□□□□ -0.25
TSKU-203ENST00000527881 HAO1Q9UJM8 370 aa13.52□□□□□ -0.25
TSKU-203ENST00000527881 NR2E1Q9Y466 385 aa13.52□□□□□ -0.25
TSKU-203ENST00000527881 RGPD8O14715 1765 aaPredicted RBP13.51□□□□□ -0.25
TSKU-203ENST00000527881 H2AFZP0C0S5 128 aa13.51□□□□□ -0.25
TSKU-203ENST00000527881 SLC5A1P13866 664 aa13.51□□□□□ -0.25
TSKU-203ENST00000527881 PTDSS1P48651 473 aaKnown RBP13.51□□□□□ -0.25
TSKU-203ENST00000527881 H2AFVQ71UI9 128 aa13.51□□□□□ -0.25
TSKU-203ENST00000527881 HOMEZQ8IX15 550 aa13.51□□□□□ -0.25
TSKU-203ENST00000527881 ERP27Q96DN0 273 aa13.51□□□□□ -0.25
TSKU-203ENST00000527881 NAP1L3Q99457 506 aaPredicted RBP13.51□□□□□ -0.25
TSKU-203ENST00000527881 NID2Q14112 1375 aa13.51□□□□□ -0.25
TSKU-203ENST00000527881 SPEF2Q9C093 1822 aa13.51□□□□□ -0.25
TSKU-203ENST00000527881 PFKFB3Q16875 520 aaPredicted RBP13.51□□□□□ -0.25
TSKU-203ENST00000527881 TCERG1LQ5VWI1 586 aa13.51□□□□□ -0.25
TSKU-203ENST00000527881 BICDL1Q6ZP65 573 aa13.51□□□□□ -0.25
TSKU-203ENST00000527881 TPCN2Q8NHX9 752 aa13.51□□□□□ -0.25
TSKU-203ENST00000527881 UCMAQ8WVF2 138 aa13.51□□□□□ -0.25
TSKU-203ENST00000527881 ANKRD27Q96NW4 1050 aa13.51□□□□□ -0.25
TSKU-203ENST00000527881 C7orf25Q9BPX7 421 aa13.51□□□□□ -0.25
TSKU-203ENST00000527881 PCDHA4Q9UN74 947 aa13.51□□□□□ -0.25
TSKU-203ENST00000527881 NVLO15381 856 aaKnown RBP13.51□□□□□ -0.25
TSKU-203ENST00000527881 OR52Z1P0C646 297 aa13.51□□□□□ -0.25
TSKU-203ENST00000527881 ACTN1P12814 892 aa13.51□□□□□ -0.25
TSKU-203ENST00000527881 KCNA3P22001 575 aa13.51□□□□□ -0.25
TSKU-203ENST00000527881 DYNC1I2Q13409 638 aaKnown RBP13.51□□□□□ -0.25
TSKU-203ENST00000527881 ZRSR2Q15696 482 aaKnown RBP13.51□□□□□ -0.25
TSKU-203ENST00000527881 CROCCP2Q86T23 111 aa13.51□□□□□ -0.25
TSKU-203ENST00000527881 COL23A1Q86Y22 540 aaPredicted RBP13.51□□□□□ -0.25
TSKU-203ENST00000527881 GLIS3Q8NEA6 775 aa13.51□□□□□ -0.25
TSKU-203ENST00000527881 NKIRAS1Q9NYS0 192 aa13.51□□□□□ -0.25
TSKU-203ENST00000527881 TBK1Q9UHD2 729 aa13.51□□□□□ -0.25
TSKU-203ENST00000527881 PTPN22Q9Y2R2 807 aa13.51□□□□□ -0.25
TSKU-203ENST00000527881 DIP2AQ14689 1571 aa13.5□□□□□ -0.25
TSKU-203ENST00000527881 MAGEB6P1A0A0J9YX57 407 aa13.5□□□□□ -0.25
TSKU-203ENST00000527881 FOXO6A8MYZ6 492 aa13.5□□□□□ -0.25
TSKU-203ENST00000527881 LRRC63Q05C16 580 aa13.5□□□□□ -0.25
TSKU-203ENST00000527881 MKRN4PQ13434 485 aaPredicted RBP13.5□□□□□ -0.25
TSKU-203ENST00000527881 KIF6Q6ZMV9 814 aa13.5□□□□□ -0.25
TSKU-203ENST00000527881 SYCE1Q8N0S2 351 aa13.5□□□□□ -0.25
TSKU-203ENST00000527881 LRRC8CQ8TDW0 803 aa13.5□□□□□ -0.25
TSKU-203ENST00000527881 MAGEF1Q9HAY2 307 aa13.5□□□□□ -0.25
TSKU-203ENST00000527881 TSPY2A6NKD2 308 aa13.5□□□□□ -0.25
TSKU-203ENST00000527881 TTC36A6NLP5 189 aa13.5□□□□□ -0.25
TSKU-203ENST00000527881 MARCH6O60337 910 aa13.5□□□□□ -0.25
TSKU-203ENST00000527881 ENTPD5O75356 428 aa13.5□□□□□ -0.25
TSKU-203ENST00000527881 SETSIPP0DME0 302 aa13.5□□□□□ -0.25
TSKU-203ENST00000527881 FKBP3Q00688 224 aaKnown RBP13.5□□□□□ -0.25
TSKU-203ENST00000527881 PUM3Q15397 648 aaKnown RBP13.5□□□□□ -0.25
TSKU-203ENST00000527881 GALNTL6Q49A17 601 aa13.5□□□□□ -0.25
TSKU-203ENST00000527881 KIAA1755Q5JYT7 1200 aa13.5□□□□□ -0.25
TSKU-203ENST00000527881 APBB1IPQ7Z5R6 666 aaPredicted RBP13.5□□□□□ -0.25
TSKU-203ENST00000527881 TTC8Q8TAM2 541 aa13.5□□□□□ -0.25
TSKU-203ENST00000527881 TAOK3Q9H2K8 898 aa13.5□□□□□ -0.25
TSKU-203ENST00000527881 CYP39A1Q9NYL5 469 aa13.5□□□□□ -0.25
TSKU-203ENST00000527881 CES2O00748 559 aa13.5□□□□□ -0.25
TSKU-203ENST00000527881 DDAH1O94760 285 aa13.5□□□□□ -0.25
TSKU-203ENST00000527881 UNC5CO95185 931 aa13.5□□□□□ -0.25
TSKU-203ENST00000527881 NUDT17P0C025 328 aa13.5□□□□□ -0.25
TSKU-203ENST00000527881 CREB1P16220 341 aa13.5□□□□□ -0.25
TSKU-203ENST00000527881 SCNN1BP51168 640 aa13.5□□□□□ -0.25
TSKU-203ENST00000527881 UBE4AQ14139 1066 aa13.5□□□□□ -0.25
TSKU-203ENST00000527881 UBAP2Q5T6F2 1119 aaKnown RBP13.5□□□□□ -0.25
TSKU-203ENST00000527881 MYOCDQ8IZQ8 938 aa13.5□□□□□ -0.25
TSKU-203ENST00000527881 MTA3Q9BTC8 594 aa13.5□□□□□ -0.25
TSKU-203ENST00000527881 PITPNM3Q9BZ71 974 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms