RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 RPTORQ8N122 1335 aa16.82■□□□□ 0.28
USH1C-207ENST00000527720 SLC9A1P19634 815 aa16.82■□□□□ 0.28
USH1C-207ENST00000527720 GUCY2CP25092 1073 aa16.82■□□□□ 0.28
USH1C-207ENST00000527720 ZYXQ15942 572 aaKnown RBP16.82■□□□□ 0.28
USH1C-207ENST00000527720 MIGA2Q7L4E1 593 aa16.82■□□□□ 0.28
USH1C-207ENST00000527720 IRF2BP2Q7Z5L9 587 aa16.82■□□□□ 0.28
USH1C-207ENST00000527720 SAMD3Q8N6K7 520 aa16.82■□□□□ 0.28
USH1C-207ENST00000527720 GINM1Q9NU53 330 aa16.82■□□□□ 0.28
USH1C-207ENST00000527720 A0A087X0T9 212 aa16.81■□□□□ 0.28
USH1C-207ENST00000527720 IPO5O00410 1097 aaKnown RBP16.81■□□□□ 0.28
USH1C-207ENST00000527720 POLR3GO15318 223 aaPredicted RBP16.81■□□□□ 0.28
USH1C-207ENST00000527720 FAM228BP0C875 321 aa16.81■□□□□ 0.28
USH1C-207ENST00000527720 ARP10275 920 aa16.81■□□□□ 0.28
USH1C-207ENST00000527720 PAFAH1B1P43034 410 aa16.81■□□□□ 0.28
USH1C-207ENST00000527720 APBA1Q02410 837 aa16.81■□□□□ 0.28
USH1C-207ENST00000527720 DCAF17Q5H9S7 520 aaPredicted RBP16.81■□□□□ 0.28
USH1C-207ENST00000527720 ZNF720Q7Z2F6 126 aa16.81■□□□□ 0.28
USH1C-207ENST00000527720 MCF2L2Q86YR7 1114 aa16.81■□□□□ 0.28
USH1C-207ENST00000527720 COG1Q8WTW3 980 aa16.81■□□□□ 0.28
USH1C-207ENST00000527720 LPAR1Q92633 364 aa16.81■□□□□ 0.28
USH1C-207ENST00000527720 DRC1Q96MC2 740 aa16.81■□□□□ 0.28
USH1C-207ENST00000527720 FIZ1Q96SL8 496 aa16.81■□□□□ 0.28
USH1C-207ENST00000527720 TLR10Q9BXR5 811 aa16.81■□□□□ 0.28
USH1C-207ENST00000527720 MAP3K20Q9NYL2 800 aaKnown RBP16.81■□□□□ 0.28
USH1C-207ENST00000527720 PCDHGC5Q9Y5F6 944 aa16.81■□□□□ 0.28
USH1C-207ENST00000527720 WDR46O15213 610 aaKnown RBP16.81■□□□□ 0.28
USH1C-207ENST00000527720 DPEP1P16444 411 aa16.81■□□□□ 0.28
USH1C-207ENST00000527720 UBXN2AP68543 259 aa16.81■□□□□ 0.28
USH1C-207ENST00000527720 CCDC181Q5TID7 509 aa16.81■□□□□ 0.28
USH1C-207ENST00000527720 NFRKBQ6P4R8 1299 aa16.81■□□□□ 0.28
USH1C-207ENST00000527720 CDAN1Q8IWY9 1227 aa16.81■□□□□ 0.28
USH1C-207ENST00000527720 ANKRD13CQ8N6S4 541 aa16.81■□□□□ 0.28
USH1C-207ENST00000527720 PRPF38AQ8NAV1 312 aaKnown RBP16.81■□□□□ 0.28
USH1C-207ENST00000527720 SPATA4Q8NEY3 305 aa16.81■□□□□ 0.28
USH1C-207ENST00000527720 GOLGA5Q8TBA6 731 aa16.81■□□□□ 0.28
USH1C-207ENST00000527720 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.81■□□□□ 0.28
USH1C-207ENST00000527720 PDE11AQ9HCR9 933 aa16.81■□□□□ 0.28
USH1C-207ENST00000527720 FBXO28Q9NVF7 368 aa16.81■□□□□ 0.28
USH1C-207ENST00000527720 ADAMTS1Q9UHI8 967 aa16.81■□□□□ 0.28
USH1C-207ENST00000527720 CCPG1Q9ULG6 757 aa16.81■□□□□ 0.28
USH1C-207ENST00000527720 DAAM1Q9Y4D1 1078 aa16.81■□□□□ 0.28
USH1C-207ENST00000527720 WNT10BO00744 389 aa16.8■□□□□ 0.28
USH1C-207ENST00000527720 CLIC2O15247 247 aa16.8■□□□□ 0.28
USH1C-207ENST00000527720 NMT1P30419 496 aaKnown RBP16.8■□□□□ 0.28
USH1C-207ENST00000527720 CYP2C19P33261 490 aa16.8■□□□□ 0.28
USH1C-207ENST00000527720 CASP4P49662 377 aa16.8■□□□□ 0.28
USH1C-207ENST00000527720 NAP1L1P55209 391 aaKnown RBP16.8■□□□□ 0.28
USH1C-207ENST00000527720 C2orf54Q08AI8 447 aa16.8■□□□□ 0.28
USH1C-207ENST00000527720 TNIP1Q15025 636 aa16.8■□□□□ 0.28
USH1C-207ENST00000527720 TCERG1LQ5VWI1 586 aa16.8■□□□□ 0.28
USH1C-207ENST00000527720 HS2ST1Q7LGA3 356 aa16.8■□□□□ 0.28
USH1C-207ENST00000527720 FAM178BQ8IXR5 827 aa16.8■□□□□ 0.28
USH1C-207ENST00000527720 FAM186BQ8IYM0 893 aa16.8■□□□□ 0.28
USH1C-207ENST00000527720 SUGCTQ9HAC7 445 aa16.8■□□□□ 0.28
USH1C-207ENST00000527720 PCDHB13Q9Y5F0 798 aa16.8■□□□□ 0.28
USH1C-207ENST00000527720 ZNF536O15090 1300 aa16.8■□□□□ 0.28
USH1C-207ENST00000527720 SFI1A8K8P3 1242 aa16.8■□□□□ 0.28
USH1C-207ENST00000527720 H3BQF6 201 aa16.8■□□□□ 0.28
USH1C-207ENST00000527720 BUB1O43683 1085 aa16.8■□□□□ 0.28
USH1C-207ENST00000527720 ACTN1P12814 892 aa16.8■□□□□ 0.28
USH1C-207ENST00000527720 KLRC1P26715 233 aa16.8■□□□□ 0.28
USH1C-207ENST00000527720 JAM2P57087 298 aa16.8■□□□□ 0.28
USH1C-207ENST00000527720 KCNA1Q09470 495 aa16.8■□□□□ 0.28
USH1C-207ENST00000527720 MYBPC2Q14324 1141 aa16.8■□□□□ 0.28
USH1C-207ENST00000527720 KIAA0753Q2KHM9 967 aa16.8■□□□□ 0.28
USH1C-207ENST00000527720 CCNI2Q6ZMN8 369 aaPredicted RBP16.8■□□□□ 0.28
USH1C-207ENST00000527720 GPIHBP1Q8IV16 184 aa16.8■□□□□ 0.28
USH1C-207ENST00000527720 SLC16A10Q8TF71 515 aa16.8■□□□□ 0.28
USH1C-207ENST00000527720 LXNQ9BS40 222 aa16.8■□□□□ 0.28
USH1C-207ENST00000527720 GLIS2Q9BZE0 524 aaPredicted RBP16.8■□□□□ 0.28
USH1C-207ENST00000527720 SIX2Q9NPC8 291 aa16.8■□□□□ 0.28
USH1C-207ENST00000527720 MED4Q9NPJ6 270 aa16.8■□□□□ 0.28
USH1C-207ENST00000527720 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.8■□□□□ 0.28
USH1C-207ENST00000527720 ARID5AQ03989 594 aa16.79■□□□□ 0.28
USH1C-207ENST00000527720 PTK2Q05397 1052 aa16.79■□□□□ 0.28
USH1C-207ENST00000527720 IFI16Q16666 785 aaKnown RBP16.79■□□□□ 0.28
USH1C-207ENST00000527720 CFAP221Q4G0U5 840 aa16.79■□□□□ 0.28
USH1C-207ENST00000527720 FMNL3Q8IVF7 1028 aa16.79■□□□□ 0.28
USH1C-207ENST00000527720 ZNF341Q9BYN7 854 aa16.79■□□□□ 0.28
USH1C-207ENST00000527720 DMAC2Q9NW81 257 aa16.79■□□□□ 0.28
USH1C-207ENST00000527720 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.79■□□□□ 0.28
USH1C-207ENST00000527720 GCNT4Q9P109 453 aa16.79■□□□□ 0.28
USH1C-207ENST00000527720 PNMA2Q9UL42 364 aa16.79■□□□□ 0.28
USH1C-207ENST00000527720 PARP14Q460N5 1801 aa16.79■□□□□ 0.28
USH1C-207ENST00000527720 ARHGEF35A5YM69 484 aa16.79■□□□□ 0.28
USH1C-207ENST00000527720 PHF20L1A8MW92 1017 aa16.79■□□□□ 0.28
USH1C-207ENST00000527720 MAPTP10636 758 aaKnown RBP16.79■□□□□ 0.28
USH1C-207ENST00000527720 INPP5BP32019 993 aa16.79■□□□□ 0.28
USH1C-207ENST00000527720 CXCL9Q07325 125 aa16.79■□□□□ 0.28
USH1C-207ENST00000527720 PPP2R5AQ15172 486 aa16.79■□□□□ 0.28
USH1C-207ENST00000527720 GLE1Q53GS7 698 aaKnown RBP16.79■□□□□ 0.28
USH1C-207ENST00000527720 ZNF571Q7Z3V5 609 aaPredicted RBP16.79■□□□□ 0.28
USH1C-207ENST00000527720 VPS36Q86VN1 386 aa16.79■□□□□ 0.28
USH1C-207ENST00000527720 SLC9A9Q8IVB4 645 aa16.79■□□□□ 0.28
USH1C-207ENST00000527720 FAM71BQ8TC56 605 aa16.79■□□□□ 0.28
USH1C-207ENST00000527720 AGBL1Q96MI9 1066 aa16.79■□□□□ 0.28
USH1C-207ENST00000527720 STRA6Q9BX79 667 aa16.79■□□□□ 0.28
USH1C-207ENST00000527720 BCAS3Q9H6U6 928 aa16.79■□□□□ 0.28
USH1C-207ENST00000527720 ZCCHC17Q9NP64 241 aaKnown RBP16.79■□□□□ 0.28
USH1C-207ENST00000527720 MYOZ2Q9NPC6 264 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms