RNA–Protein interactions for RNA: ENST00000527537.5

RDX-203, Transcript of radixin, humanhuman

TSL 1 (best)

Gene RDX, Length 3,403 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-203ENST00000527537 KRT40Q6A162 431 aa7.26□□□□□ -1.25
RDX-203ENST00000527537 MARK2Q7KZI7 788 aaKnown RBP7.26□□□□□ -1.25
RDX-203ENST00000527537 RIBC1Q8N443 379 aaPredicted RBP7.26□□□□□ -1.25
RDX-203ENST00000527537 ANKLE1Q8NAG6 615 aa7.26□□□□□ -1.25
RDX-203ENST00000527537 ZNF507Q8TCN5 953 aa7.26□□□□□ -1.25
RDX-203ENST00000527537 DIS3LQ8TF46 1054 aaKnown RBP7.26□□□□□ -1.25
RDX-203ENST00000527537 CCDC42Q96M95 316 aa7.26□□□□□ -1.25
RDX-203ENST00000527537 AIFM3Q96NN9 605 aa7.26□□□□□ -1.25
RDX-203ENST00000527537 HNRNPABQ99729 332 aaKnown RBP7.26□□□□□ -1.25
RDX-203ENST00000527537 TTYH3Q9C0H2 523 aa7.26□□□□□ -1.25
RDX-203ENST00000527537 DHX36Q9H2U1 1008 aaKnown RBP7.26□□□□□ -1.25
RDX-203ENST00000527537 DENND2DQ9H6A0 471 aaPredicted RBP7.26□□□□□ -1.25
RDX-203ENST00000527537 FGFR1OP2Q9NVK5 253 aa7.26□□□□□ -1.25
RDX-203ENST00000527537 BABAM1Q9NWV8 329 aa7.26□□□□□ -1.25
RDX-203ENST00000527537 BTBD7Q9P203 1132 aa7.26□□□□□ -1.25
RDX-203ENST00000527537 PRKAG3Q9UGI9 489 aa7.26□□□□□ -1.25
RDX-203ENST00000527537 RWDD2AQ9UIY3 292 aa7.26□□□□□ -1.25
RDX-203ENST00000527537 RPL26L1Q9UNX3 145 aaKnown RBP7.26□□□□□ -1.25
RDX-203ENST00000527537 HEY1Q9Y5J3 304 aa7.26□□□□□ -1.25
RDX-203ENST00000527537 BHMG1C9JSJ3 638 aaPredicted RBP7.25□□□□□ -1.25
RDX-203ENST00000527537 ATP5HO75947 161 aa7.25□□□□□ -1.25
RDX-203ENST00000527537 IARSP41252 1262 aaKnown RBP7.25□□□□□ -1.25
RDX-203ENST00000527537 PDE1BQ01064 536 aa7.25□□□□□ -1.25
RDX-203ENST00000527537 R3HDM1Q15032 1099 aaKnown RBP7.25□□□□□ -1.25
RDX-203ENST00000527537 CCDC6Q16204 474 aa7.25□□□□□ -1.25
RDX-203ENST00000527537 EPHA10Q5JZY3 1008 aa7.25□□□□□ -1.25
RDX-203ENST00000527537 KLHL7Q8IXQ5 586 aa7.25□□□□□ -1.25
RDX-203ENST00000527537 ZNF579Q8NAF0 562 aaKnown RBP7.25□□□□□ -1.25
RDX-203ENST00000527537 PGM2Q96G03 612 aa7.25□□□□□ -1.25
RDX-203ENST00000527537 MAML3Q96JK9 1138 aa7.25□□□□□ -1.25
RDX-203ENST00000527537 DDX43Q9NXZ2 648 aaKnown RBP7.25□□□□□ -1.25
RDX-203ENST00000527537 STK32BQ9NY57 414 aa7.25□□□□□ -1.25
RDX-203ENST00000527537 IL1RAPL1Q9NZN1 696 aa7.25□□□□□ -1.25
RDX-203ENST00000527537 ITM2BQ9Y287 266 aa7.25□□□□□ -1.25
RDX-203ENST00000527537 MYPNQ86TC9 1320 aa7.25□□□□□ -1.25
RDX-203ENST00000527537 LRRC37A3O60309 1634 aa7.25□□□□□ -1.25
RDX-203ENST00000527537 TMEM110-MUSTN1A8MSY1 372 aa7.25□□□□□ -1.25
RDX-203ENST00000527537 CASP1P29466 404 aa7.25□□□□□ -1.25
RDX-203ENST00000527537 AFMP43652 599 aa7.25□□□□□ -1.25
RDX-203ENST00000527537 GALK1P51570 392 aa7.25□□□□□ -1.25
RDX-203ENST00000527537 USP11P51784 963 aa7.25□□□□□ -1.25
RDX-203ENST00000527537 AKAP4Q5JQC9 854 aa7.25□□□□□ -1.25
RDX-203ENST00000527537 C3orf62Q6ZUJ4 267 aa7.25□□□□□ -1.25
RDX-203ENST00000527537 DZIP1Q86YF9 867 aaKnown RBP7.25□□□□□ -1.25
RDX-203ENST00000527537 NME8Q8N427 588 aa7.25□□□□□ -1.25
RDX-203ENST00000527537 HELBQ8NG08 1087 aaPredicted RBP7.25□□□□□ -1.25
RDX-203ENST00000527537 SUCLG2Q96I99 432 aa7.25□□□□□ -1.25
RDX-203ENST00000527537 ALG1Q9BT22 464 aa7.25□□□□□ -1.25
RDX-203ENST00000527537 EIF2AQ9BY44 585 aaKnown RBP7.25□□□□□ -1.25
RDX-203ENST00000527537 ASCC2Q9H1I8 757 aaPredicted RBP7.25□□□□□ -1.25
RDX-203ENST00000527537 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.25□□□□□ -1.25
RDX-203ENST00000527537 SALL4Q9UJQ4 1053 aa7.25□□□□□ -1.25
RDX-203ENST00000527537 TMEM59LQ9UK28 342 aa7.25□□□□□ -1.25
RDX-203ENST00000527537 NDUFB9Q9Y6M9 179 aa7.25□□□□□ -1.25
RDX-203ENST00000527537 A0A0G2JLW4 131 aa7.24□□□□□ -1.25
RDX-203ENST00000527537 GOLGA8BA8MQT2 603 aa7.24□□□□□ -1.25
RDX-203ENST00000527537 ZPR1O75312 459 aa7.24□□□□□ -1.25
RDX-203ENST00000527537 EMP3P54852 163 aa7.24□□□□□ -1.25
RDX-203ENST00000527537 CYLC2Q14093 348 aaPredicted RBP7.24□□□□□ -1.25
RDX-203ENST00000527537 GIT2Q14161 759 aa7.24□□□□□ -1.25
RDX-203ENST00000527537 RCN1Q15293 331 aa7.24□□□□□ -1.25
RDX-203ENST00000527537 FAM47EQ6ZV65 393 aa7.24□□□□□ -1.25
RDX-203ENST00000527537 SH3RF1Q7Z6J0 888 aa7.24□□□□□ -1.25
RDX-203ENST00000527537 INPP5DQ92835 1189 aa7.24□□□□□ -1.25
RDX-203ENST00000527537 PAGE5Q96GU1 130 aa7.24□□□□□ -1.25
RDX-203ENST00000527537 DNAJC1Q96KC8 554 aaKnown RBP7.24□□□□□ -1.25
RDX-203ENST00000527537 INPP4AQ96PE3 977 aaPredicted RBP7.24□□□□□ -1.25
RDX-203ENST00000527537 NAP1L3Q99457 506 aaPredicted RBP7.24□□□□□ -1.25
RDX-203ENST00000527537 OSBPL10Q9BXB5 764 aa7.24□□□□□ -1.25
RDX-203ENST00000527537 FAIMQ9NVQ4 179 aa7.24□□□□□ -1.25
RDX-203ENST00000527537 RABL2BQ9UNT1 228 aa7.24□□□□□ -1.25
RDX-203ENST00000527537 PASKQ96RG2 1323 aa7.24□□□□□ -1.25
RDX-203ENST00000527537 KLF18A0A0U1RQI7 1052 aa7.24□□□□□ -1.25
RDX-203ENST00000527537 KANSL1LA0AUZ9 987 aa7.24□□□□□ -1.25
RDX-203ENST00000527537 TCP11X1B4DZS4 312 aa7.24□□□□□ -1.25
RDX-203ENST00000527537 RNMTO43148 476 aaKnown RBP7.24□□□□□ -1.25
RDX-203ENST00000527537 GSTT2P0CG29 244 aa7.24□□□□□ -1.25
RDX-203ENST00000527537 GSTT2BP0CG30 244 aa7.24□□□□□ -1.25
RDX-203ENST00000527537 CDK4P11802 303 aa7.24□□□□□ -1.25
RDX-203ENST00000527537 TXKP42681 527 aa7.24□□□□□ -1.25
RDX-203ENST00000527537 WDR72Q3MJ13 1102 aa7.24□□□□□ -1.25
RDX-203ENST00000527537 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.24□□□□□ -1.25
RDX-203ENST00000527537 KHDC1Q4VXA5 237 aaKnown RBP7.24□□□□□ -1.25
RDX-203ENST00000527537 RNF43Q68DV7 783 aa7.24□□□□□ -1.25
RDX-203ENST00000527537 LRRC74BQ6ZQY2 392 aa7.24□□□□□ -1.25
RDX-203ENST00000527537 USP49Q70CQ1 688 aa7.24□□□□□ -1.25
RDX-203ENST00000527537 PROSER2Q86WR7 435 aaPredicted RBP7.24□□□□□ -1.25
RDX-203ENST00000527537 USP38Q8NB14 1042 aa7.24□□□□□ -1.25
RDX-203ENST00000527537 BHMTQ93088 406 aa7.24□□□□□ -1.25
RDX-203ENST00000527537 ZNF184Q99676 751 aaPredicted RBP7.24□□□□□ -1.25
RDX-203ENST00000527537 TBC1D10AQ9BXI6 508 aa7.24□□□□□ -1.25
RDX-203ENST00000527537 PTTG2Q9NZH5 202 aa7.24□□□□□ -1.25
RDX-203ENST00000527537 SEC63Q9UGP8 760 aaKnown RBP7.24□□□□□ -1.25
RDX-203ENST00000527537 TIMM22Q9Y584 194 aa7.24□□□□□ -1.25
RDX-203ENST00000527537 KIF13AQ9H1H9 1805 aa7.24□□□□□ -1.25
RDX-203ENST00000527537 HGSO14964 777 aaPredicted RBP7.24□□□□□ -1.25
RDX-203ENST00000527537 LCA5LO95447 670 aa7.24□□□□□ -1.25
RDX-203ENST00000527537 PLEKP08567 350 aaPredicted RBP7.24□□□□□ -1.25
RDX-203ENST00000527537 IGHMBP2P38935 993 aaKnown RBP7.24□□□□□ -1.25
RDX-203ENST00000527537 ARPC4P59998 168 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms