RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 ANKLE1Q8NAG6 615 aa15.32■□□□□ 0.04
CD44-224ENST00000526669 BBXQ8WY36 941 aaPredicted RBP15.32■□□□□ 0.04
CD44-224ENST00000526669 NT5C3AQ9H0P0 336 aa15.32■□□□□ 0.04
CD44-224ENST00000526669 NRBP2Q9NSY0 501 aa15.32■□□□□ 0.04
CD44-224ENST00000526669 SETD4Q9NVD3 440 aa15.32■□□□□ 0.04
CD44-224ENST00000526669 TANC1Q9C0D5 1861 aa15.31■□□□□ 0.04
CD44-224ENST00000526669 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.31■□□□□ 0.04
CD44-224ENST00000526669 A0A0U1RQG5 324 aaPredicted RBP15.31■□□□□ 0.04
CD44-224ENST00000526669 LYPLA2O95372 231 aa15.31■□□□□ 0.04
CD44-224ENST00000526669 LIG1P18858 919 aa15.31■□□□□ 0.04
CD44-224ENST00000526669 MUTP22033 750 aa15.31■□□□□ 0.04
CD44-224ENST00000526669 SLC26A2P50443 739 aa15.31■□□□□ 0.04
CD44-224ENST00000526669 CCDC73Q6ZRK6 1079 aa15.31■□□□□ 0.04
CD44-224ENST00000526669 C7orf31Q8N865 590 aa15.31■□□□□ 0.04
CD44-224ENST00000526669 CEP170P1Q96L14 293 aa15.31■□□□□ 0.04
CD44-224ENST00000526669 NACC1Q96RE7 527 aa15.31■□□□□ 0.04
CD44-224ENST00000526669 BHMT2Q9H2M3 363 aa15.31■□□□□ 0.04
CD44-224ENST00000526669 C11orf49Q9H6J7 331 aa15.31■□□□□ 0.04
CD44-224ENST00000526669 BLOC1S4Q9NUP1 217 aa15.31■□□□□ 0.04
CD44-224ENST00000526669 SERTAD1Q9UHV2 236 aa15.31■□□□□ 0.04
CD44-224ENST00000526669 KCNH3Q9ULD8 1083 aa15.31■□□□□ 0.04
CD44-224ENST00000526669 DNM3Q9UQ16 869 aa15.31■□□□□ 0.04
CD44-224ENST00000526669 HPSEQ9Y251 543 aa15.31■□□□□ 0.04
CD44-224ENST00000526669 C17orf102A2RUQ5 167 aa15.3■□□□□ 0.04
CD44-224ENST00000526669 ZBTB42B2RXF5 422 aa15.3■□□□□ 0.04
CD44-224ENST00000526669 SLC26A4O43511 780 aa15.3■□□□□ 0.04
CD44-224ENST00000526669 USO1O60763 962 aaKnown RBP15.3■□□□□ 0.04
CD44-224ENST00000526669 EYA4O95677 639 aa15.3■□□□□ 0.04
CD44-224ENST00000526669 PLA2G4BP0C869 781 aa15.3■□□□□ 0.04
CD44-224ENST00000526669 MCM4P33991 863 aa15.3■□□□□ 0.04
CD44-224ENST00000526669 SYKP43405 635 aa15.3■□□□□ 0.04
CD44-224ENST00000526669 UBE2HP62256 183 aa15.3■□□□□ 0.04
CD44-224ENST00000526669 NAALADL2Q58DX5 795 aa15.3■□□□□ 0.04
CD44-224ENST00000526669 GDF6Q6KF10 455 aaPredicted RBP15.3■□□□□ 0.04
CD44-224ENST00000526669 LMBR1Q8WVP7 490 aa15.3■□□□□ 0.04
CD44-224ENST00000526669 RAD54LQ92698 747 aa15.3■□□□□ 0.04
CD44-224ENST00000526669 STAMQ92783 540 aa15.3■□□□□ 0.04
CD44-224ENST00000526669 CYP26B1Q9NR63 512 aa15.3■□□□□ 0.04
CD44-224ENST00000526669 COL1A2P08123 1366 aa15.29■□□□□ 0.04
CD44-224ENST00000526669 ARHGEF35A5YM69 484 aa15.29■□□□□ 0.04
CD44-224ENST00000526669 ARVCFO00192 962 aa15.29■□□□□ 0.04
CD44-224ENST00000526669 COL6A1P12109 1028 aa15.29■□□□□ 0.04
CD44-224ENST00000526669 RARRES1P49788 294 aa15.29■□□□□ 0.04
CD44-224ENST00000526669 E2F4Q16254 413 aa15.29■□□□□ 0.04
CD44-224ENST00000526669 ZNF484Q5JVG2 852 aa15.29■□□□□ 0.04
CD44-224ENST00000526669 SLC39A5Q6ZMH5 540 aa15.29■□□□□ 0.04
CD44-224ENST00000526669 OTUD6AQ7L8S5 288 aa15.29■□□□□ 0.04
CD44-224ENST00000526669 NECAB2Q7Z6G3 386 aa15.29■□□□□ 0.04
CD44-224ENST00000526669 GRAMD1CQ8IYS0 662 aa15.29■□□□□ 0.04
CD44-224ENST00000526669 LARP4BQ92615 738 aaKnown RBP15.29■□□□□ 0.04
CD44-224ENST00000526669 NIFKQ9BYG3 293 aaKnown RBP15.29■□□□□ 0.04
CD44-224ENST00000526669 POLD4Q9HCU8 107 aa15.29■□□□□ 0.04
CD44-224ENST00000526669 ANKEF1Q9NU02 776 aa15.29■□□□□ 0.04
CD44-224ENST00000526669 GTF2IRD1Q9UHL9 959 aa15.29■□□□□ 0.04
CD44-224ENST00000526669 TET1Q8NFU7 2136 aa15.29■□□□□ 0.04
CD44-224ENST00000526669 FAM237AA0A1B0GTK4 181 aa15.28■□□□□ 0.04
CD44-224ENST00000526669 TREHO43280 583 aa15.28■□□□□ 0.04
CD44-224ENST00000526669 NR1I2O75469 434 aa15.28■□□□□ 0.04
CD44-224ENST00000526669 RAD51AP2Q09MP3 1159 aa15.28■□□□□ 0.04
CD44-224ENST00000526669 TARBP2Q15633 366 aaKnown RBP15.28■□□□□ 0.04
CD44-224ENST00000526669 NFRKBQ6P4R8 1299 aa15.28■□□□□ 0.04
CD44-224ENST00000526669 MAEAQ7L5Y9 396 aa15.28■□□□□ 0.04
CD44-224ENST00000526669 LRRC71Q8N4P6 559 aa15.28■□□□□ 0.04
CD44-224ENST00000526669 CEP89Q96ST8 783 aa15.28■□□□□ 0.04
CD44-224ENST00000526669 RUSC1Q9BVN2 902 aa15.28■□□□□ 0.04
CD44-224ENST00000526669 TRMT13Q9NUP7 481 aaKnown RBP15.28■□□□□ 0.04
CD44-224ENST00000526669 STK17AQ9UEE5 414 aa15.28■□□□□ 0.04
CD44-224ENST00000526669 DBR1Q9UK59 544 aaKnown RBP15.28■□□□□ 0.04
CD44-224ENST00000526669 NRCAMQ92823 1304 aa15.27■□□□□ 0.04
CD44-224ENST00000526669 NPHP3-ACAD11A0A0J9YXS1 232 aa15.27■□□□□ 0.04
CD44-224ENST00000526669 RRN3P2A6NIE6 340 aa15.27■□□□□ 0.04
CD44-224ENST00000526669 RBAK-RBAKDNI3L0D1 243 aa15.27■□□□□ 0.04
CD44-224ENST00000526669 ACTN4O43707 911 aaKnown RBP15.27■□□□□ 0.04
CD44-224ENST00000526669 PQBP1O60828 265 aaKnown RBP15.27■□□□□ 0.04
CD44-224ENST00000526669 ZNF202O95125 648 aa15.27■□□□□ 0.04
CD44-224ENST00000526669 C22orf31O95567 290 aa15.27■□□□□ 0.04
CD44-224ENST00000526669 KLRC1P26715 233 aa15.27■□□□□ 0.04
CD44-224ENST00000526669 AFMP43652 599 aa15.27■□□□□ 0.04
CD44-224ENST00000526669 CLCN3P51790 818 aa15.27■□□□□ 0.04
CD44-224ENST00000526669 POLGP54098 1239 aaPredicted RBP15.27■□□□□ 0.04
CD44-224ENST00000526669 SLC12A3P55017 1021 aa15.27■□□□□ 0.04
CD44-224ENST00000526669 RTP1P59025 263 aa15.27■□□□□ 0.04
CD44-224ENST00000526669 CACNB1Q02641 598 aaPredicted RBP15.27■□□□□ 0.04
CD44-224ENST00000526669 FAM160A1Q05DH4 1040 aa15.27■□□□□ 0.04
CD44-224ENST00000526669 TBC1D8BQ0IIM8 1120 aa15.27■□□□□ 0.04
CD44-224ENST00000526669 LRRC26Q2I0M4 334 aa15.27■□□□□ 0.04
CD44-224ENST00000526669 TRIM60Q495X7 471 aa15.27■□□□□ 0.04
CD44-224ENST00000526669 LONRF3Q496Y0 759 aa15.27■□□□□ 0.04
CD44-224ENST00000526669 MARCH8Q5T0T0 291 aa15.27■□□□□ 0.04
CD44-224ENST00000526669 PADI6Q6TGC4 694 aa15.27■□□□□ 0.04
CD44-224ENST00000526669 RUFY4Q6ZNE9 571 aa15.27■□□□□ 0.04
CD44-224ENST00000526669 GPBP1Q86WP2 473 aa15.27■□□□□ 0.04
CD44-224ENST00000526669 CEP57L1Q8IYX8 460 aa15.27■□□□□ 0.04
CD44-224ENST00000526669 FMR1NBQ8N0W7 255 aaPredicted RBP15.27■□□□□ 0.04
CD44-224ENST00000526669 IQUBQ8NA54 791 aa15.27■□□□□ 0.04
CD44-224ENST00000526669 SLC43A3Q8NBI5 491 aa15.27■□□□□ 0.04
CD44-224ENST00000526669 ENGASEQ8NFI3 743 aa15.27■□□□□ 0.04
CD44-224ENST00000526669 TRPV6Q9H1D0 765 aa15.27■□□□□ 0.04
CD44-224ENST00000526669 TUBE1Q9UJT0 475 aa15.27■□□□□ 0.04
CD44-224ENST00000526669 ATP11BQ9Y2G3 1177 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms