RNA–Protein interactions for RNA: ENST00000526066.5

CCS-204, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 872 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-204ENST00000526066 SPATA33Q96N06 139 aa19.43■□□□□ 0.7
CCS-204ENST00000526066 TFIP11Q9UBB9 837 aaKnown RBP19.43■□□□□ 0.7
CCS-204ENST00000526066 BRWD1Q9NSI6 2320 aa19.43■□□□□ 0.7
CCS-204ENST00000526066 ARP10275 920 aa19.42■□□□□ 0.7
CCS-204ENST00000526066 THPOP40225 353 aa19.42■□□□□ 0.7
CCS-204ENST00000526066 PRPHP41219 470 aa19.42■□□□□ 0.7
CCS-204ENST00000526066 SEMA3FQ13275 785 aa19.42■□□□□ 0.7
CCS-204ENST00000526066 SLC39A14Q15043 492 aa19.42■□□□□ 0.7
CCS-204ENST00000526066 CALCRLQ16602 461 aa19.42■□□□□ 0.7
CCS-204ENST00000526066 LINC00301Q8NCQ3 95 aa19.42■□□□□ 0.7
CCS-204ENST00000526066 ETNPPLQ8TBG4 499 aa19.42■□□□□ 0.7
CCS-204ENST00000526066 SLC5A5Q92911 643 aa19.42■□□□□ 0.7
CCS-204ENST00000526066 SAMD11Q96NU1 681 aa19.42■□□□□ 0.7
CCS-204ENST00000526066 MTMR9Q96QG7 549 aa19.42■□□□□ 0.7
CCS-204ENST00000526066 SCAND2PQ9GZW5 306 aaPredicted RBP19.42■□□□□ 0.7
CCS-204ENST00000526066 TMEM60Q9H2L4 133 aa19.42■□□□□ 0.7
CCS-204ENST00000526066 AGO4Q9HCK5 861 aaKnown RBP19.42■□□□□ 0.7
CCS-204ENST00000526066 RCOR1Q9UKL0 485 aa19.42■□□□□ 0.7
CCS-204ENST00000526066 MYH15Q9Y2K3 1946 aa19.42■□□□□ 0.7
CCS-204ENST00000526066 FAM86C2PA6NEL3 165 aa19.41■□□□□ 0.7
CCS-204ENST00000526066 RSPH10B2B2RC85 870 aa19.41■□□□□ 0.7
CCS-204ENST00000526066 HAS3O00219 553 aa19.41■□□□□ 0.7
CCS-204ENST00000526066 MSH4O15457 936 aa19.41■□□□□ 0.7
CCS-204ENST00000526066 BAG4O95429 457 aaKnown RBP19.41■□□□□ 0.7
CCS-204ENST00000526066 OR52Z1P0C646 297 aa19.41■□□□□ 0.7
CCS-204ENST00000526066 RSPH10BP0C881 870 aa19.41■□□□□ 0.7
CCS-204ENST00000526066 PUS10Q3MIT2 529 aaKnown RBP19.41■□□□□ 0.7
CCS-204ENST00000526066 LEXMQ3ZCV2 418 aa19.41■□□□□ 0.7
CCS-204ENST00000526066 ARL6IP4Q66PJ3 421 aaKnown RBP19.41■□□□□ 0.7
CCS-204ENST00000526066 SLFN12Q8IYM2 578 aa19.41■□□□□ 0.7
CCS-204ENST00000526066 GJD3Q8N144 294 aa19.41■□□□□ 0.7
CCS-204ENST00000526066 HAS1Q92839 578 aa19.41■□□□□ 0.7
CCS-204ENST00000526066 RIT2Q99578 217 aa19.41■□□□□ 0.7
CCS-204ENST00000526066 SENP7Q9BQF6 1050 aa19.41■□□□□ 0.7
CCS-204ENST00000526066 ZNF577Q9BSK1 485 aa19.41■□□□□ 0.7
CCS-204ENST00000526066 MLXIPQ9HAP2 919 aa19.41■□□□□ 0.7
CCS-204ENST00000526066 FAM50BQ9Y247 325 aa19.41■□□□□ 0.7
CCS-204ENST00000526066 C17orf102A2RUQ5 167 aa19.4■□□□□ 0.7
CCS-204ENST00000526066 PI4K2BG5E9Z4 385 aa19.4■□□□□ 0.7
CCS-204ENST00000526066 IPO5O00410 1097 aaKnown RBP19.4■□□□□ 0.7
CCS-204ENST00000526066 GGPS1O95749 300 aa19.4■□□□□ 0.7
CCS-204ENST00000526066 CEBPZQ03701 1054 aaKnown RBP19.4■□□□□ 0.7
CCS-204ENST00000526066 STK38Q15208 465 aa19.4■□□□□ 0.7
CCS-204ENST00000526066 CSPP1Q1MSJ5 1256 aa19.4■□□□□ 0.7
CCS-204ENST00000526066 TIGD5Q53EQ6 642 aa19.4■□□□□ 0.7
CCS-204ENST00000526066 GIMAP8Q8ND71 665 aaPredicted RBP19.4■□□□□ 0.7
CCS-204ENST00000526066 KCNG4Q8TDN1 519 aa19.4■□□□□ 0.7
CCS-204ENST00000526066 SEPT8Q92599 483 aa19.4■□□□□ 0.7
CCS-204ENST00000526066 YME1L1Q96TA2 773 aa19.4■□□□□ 0.7
CCS-204ENST00000526066 TBC1D22BQ9NU19 505 aa19.4■□□□□ 0.7
CCS-204ENST00000526066 MICAL3Q7RTP6 2002 aa19.39■□□□□ 0.69
CCS-204ENST00000526066 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.39■□□□□ 0.69
CCS-204ENST00000526066 NOP56O00567 594 aaKnown RBP19.39■□□□□ 0.69
CCS-204ENST00000526066 SPTLC2O15270 562 aa19.39■□□□□ 0.69
CCS-204ENST00000526066 SORBS3O60504 671 aa19.39■□□□□ 0.69
CCS-204ENST00000526066 PPP6R2O75170 966 aa19.39■□□□□ 0.69
CCS-204ENST00000526066 ALADP13716 330 aa19.39■□□□□ 0.69
CCS-204ENST00000526066 KCNA2P16389 499 aa19.39■□□□□ 0.69
CCS-204ENST00000526066 NCLP19338 710 aaKnown RBP19.39■□□□□ 0.69
CCS-204ENST00000526066 ZNF200P98182 395 aaPredicted RBP19.39■□□□□ 0.69
CCS-204ENST00000526066 TRIM71Q2Q1W2 868 aaKnown RBP19.39■□□□□ 0.69
CCS-204ENST00000526066 CELF3Q5SZQ8 465 aaKnown RBP19.39■□□□□ 0.69
CCS-204ENST00000526066 PTCRAQ6ISU1 281 aaPredicted RBP19.39■□□□□ 0.69
CCS-204ENST00000526066 SERINC5Q86VE9 423 aa19.39■□□□□ 0.69
CCS-204ENST00000526066 DBF4BQ8NFT6 615 aa19.39■□□□□ 0.69
CCS-204ENST00000526066 ATP6V0A1Q93050 837 aa19.39■□□□□ 0.69
CCS-204ENST00000526066 MRPL38Q96DV4 380 aaKnown RBP19.39■□□□□ 0.69
CCS-204ENST00000526066 CHAMP1Q96JM3 812 aa19.39■□□□□ 0.69
CCS-204ENST00000526066 C17orf80Q9BSJ5 609 aa19.39■□□□□ 0.69
CCS-204ENST00000526066 NFASCO94856 1347 aa19.39■□□□□ 0.69
CCS-204ENST00000526066 MARCH6O60337 910 aa19.38■□□□□ 0.69
CCS-204ENST00000526066 ATP9AO75110 1047 aa19.38■□□□□ 0.69
CCS-204ENST00000526066 PSMD10O75832 226 aa19.38■□□□□ 0.69
CCS-204ENST00000526066 NEDD9Q14511 834 aa19.38■□□□□ 0.69
CCS-204ENST00000526066 TCTN1Q2MV58 587 aa19.38■□□□□ 0.69
CCS-204ENST00000526066 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.38■□□□□ 0.69
CCS-204ENST00000526066 EP400NLQ6ZTU2 488 aa19.38■□□□□ 0.69
CCS-204ENST00000526066 FAM178BQ8IXR5 827 aa19.38■□□□□ 0.69
CCS-204ENST00000526066 LEO1Q8WVC0 666 aaPredicted RBP19.38■□□□□ 0.69
CCS-204ENST00000526066 SPATA32Q96LK8 384 aa19.38■□□□□ 0.69
CCS-204ENST00000526066 UIMC1Q96RL1 719 aa19.38■□□□□ 0.69
CCS-204ENST00000526066 PRR33A8MZF0 331 aa19.37■□□□□ 0.69
CCS-204ENST00000526066 DHX15O43143 795 aaKnown RBP19.37■□□□□ 0.69
CCS-204ENST00000526066 GAS7O60861 476 aa19.37■□□□□ 0.69
CCS-204ENST00000526066 CAND2O75155 1236 aa19.37■□□□□ 0.69
CCS-204ENST00000526066 GNAT1P11488 350 aa19.37■□□□□ 0.69
CCS-204ENST00000526066 HOXD8P13378 290 aaPredicted RBP19.37■□□□□ 0.69
CCS-204ENST00000526066 UBA1P22314 1058 aaKnown RBP19.37■□□□□ 0.69
CCS-204ENST00000526066 ITGB3BPQ13352 177 aaPredicted RBP19.37■□□□□ 0.69
CCS-204ENST00000526066 MBTPS1Q14703 1052 aa19.37■□□□□ 0.69
CCS-204ENST00000526066 HSDL1Q3SXM5 330 aa19.37■□□□□ 0.69
CCS-204ENST00000526066 LRCH2Q5VUJ6 765 aa19.37■□□□□ 0.69
CCS-204ENST00000526066 TRAF7Q6Q0C0 670 aa19.37■□□□□ 0.69
CCS-204ENST00000526066 DTHD1Q6ZMT9 781 aa19.37■□□□□ 0.69
CCS-204ENST00000526066 KHSRPQ92945 711 aaKnown RBP eCLIP19.37■□□□□ 0.69
CCS-204ENST00000526066 WNT8BQ93098 351 aa19.37■□□□□ 0.69
CCS-204ENST00000526066 SDF4Q9BRK5 362 aa19.37■□□□□ 0.69
CCS-204ENST00000526066 PCDHA12Q9UN75 941 aa19.37■□□□□ 0.69
CCS-204ENST00000526066 SRPRBQ9Y5M8 271 aaKnown RBP19.37■□□□□ 0.69
CCS-204ENST00000526066 H3BRB1 525 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms