RNA–Protein interactions for RNA: ENST00000525950.5

BDNF-213, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-213ENST00000525950 DDX47Q9H0S4 455 aaKnown RBP8.71□□□□□ -1.02
BDNF-213ENST00000525950 CPVLQ9H3G5 476 aa8.71□□□□□ -1.02
BDNF-213ENST00000525950 CEP83Q9Y592 693 aa8.71□□□□□ -1.02
BDNF-213ENST00000525950 IGKV6D-41A0A0C4DH26 115 aa8.7□□□□□ -1.02
BDNF-213ENST00000525950 USP17L5A8MUK1 530 aa8.7□□□□□ -1.02
BDNF-213ENST00000525950 F8W031 263 aaPredicted RBP8.7□□□□□ -1.02
BDNF-213ENST00000525950 ZPR1O75312 459 aa8.7□□□□□ -1.02
BDNF-213ENST00000525950 TRIM37O94972 964 aa8.7□□□□□ -1.02
BDNF-213ENST00000525950 EZRP15311 586 aaKnown RBP8.7□□□□□ -1.02
BDNF-213ENST00000525950 HSPA6P17066 643 aa8.7□□□□□ -1.02
BDNF-213ENST00000525950 TMOD1P28289 359 aa8.7□□□□□ -1.02
BDNF-213ENST00000525950 NF2P35240 595 aa8.7□□□□□ -1.02
BDNF-213ENST00000525950 FLT3P36888 993 aa8.7□□□□□ -1.02
BDNF-213ENST00000525950 HADHBP55084 474 aaKnown RBP8.7□□□□□ -1.02
BDNF-213ENST00000525950 RNASE9P60153 205 aaKnown RBP8.7□□□□□ -1.02
BDNF-213ENST00000525950 DHX9Q08211 1270 aaKnown RBP8.7□□□□□ -1.02
BDNF-213ENST00000525950 KNOP1Q1ED39 458 aaKnown RBP8.7□□□□□ -1.02
BDNF-213ENST00000525950 KRT71Q3SY84 523 aa8.7□□□□□ -1.02
BDNF-213ENST00000525950 BTNL9Q6UXG8 535 aa8.7□□□□□ -1.02
BDNF-213ENST00000525950 TXNRD3Q86VQ6 643 aa8.7□□□□□ -1.02
BDNF-213ENST00000525950 DDX42Q86XP3 938 aaKnown RBP eCLIP8.7□□□□□ -1.02
BDNF-213ENST00000525950 COL23A1Q86Y22 540 aaPredicted RBP8.7□□□□□ -1.02
BDNF-213ENST00000525950 CCDC197Q8NCU1 140 aa8.7□□□□□ -1.02
BDNF-213ENST00000525950 FMO2Q99518 471 aa8.7□□□□□ -1.02
BDNF-213ENST00000525950 FGFBP2Q9BYJ0 223 aa8.7□□□□□ -1.02
BDNF-213ENST00000525950 KCNMB3Q9NPA1 279 aa8.7□□□□□ -1.02
BDNF-213ENST00000525950 SIX2Q9NPC8 291 aa8.7□□□□□ -1.02
BDNF-213ENST00000525950 ZDHHC18Q9NUE0 388 aa8.7□□□□□ -1.02
BDNF-213ENST00000525950 AMACRQ9UHK6 382 aa8.7□□□□□ -1.02
BDNF-213ENST00000525950 TPX2Q9ULW0 747 aaKnown RBP8.7□□□□□ -1.02
BDNF-213ENST00000525950 SBF2Q86WG5 1849 aa8.7□□□□□ -1.02
BDNF-213ENST00000525950 CNTNAP4Q9C0A0 1308 aa8.7□□□□□ -1.02
BDNF-213ENST00000525950 CFAP73A6NFT4 308 aa8.7□□□□□ -1.02
BDNF-213ENST00000525950 CCDC169A6NNP5 214 aa8.7□□□□□ -1.02
BDNF-213ENST00000525950 TMEM253P0C7T8 217 aa8.7□□□□□ -1.02
BDNF-213ENST00000525950 NR2F2P24468 414 aa8.7□□□□□ -1.02
BDNF-213ENST00000525950 DNA2P51530 1060 aa8.7□□□□□ -1.02
BDNF-213ENST00000525950 CPLX4Q7Z7G2 160 aa8.7□□□□□ -1.02
BDNF-213ENST00000525950 GPBP1Q86WP2 473 aa8.7□□□□□ -1.02
BDNF-213ENST00000525950 ANKS4BQ8N8V4 417 aa8.7□□□□□ -1.02
BDNF-213ENST00000525950 RBM46Q8TBY0 533 aaKnown RBP8.7□□□□□ -1.02
BDNF-213ENST00000525950 CUL5Q93034 780 aa8.7□□□□□ -1.02
BDNF-213ENST00000525950 HVCN1Q96D96 273 aa8.7□□□□□ -1.02
BDNF-213ENST00000525950 ERP44Q9BS26 406 aa8.7□□□□□ -1.02
BDNF-213ENST00000525950 AP1M1Q9BXS5 423 aa8.7□□□□□ -1.02
BDNF-213ENST00000525950 PABPC3Q9H361 631 aaKnown RBP8.7□□□□□ -1.02
BDNF-213ENST00000525950 ODF2LQ9ULJ1 636 aa8.7□□□□□ -1.02
BDNF-213ENST00000525950 MYO3BQ8WXR4 1341 aa8.7□□□□□ -1.02
BDNF-213ENST00000525950 DDX3XO00571 662 aaKnown RBP eCLIP8.7□□□□□ -1.02
BDNF-213ENST00000525950 DDX3YO15523 660 aaKnown RBP8.7□□□□□ -1.02
BDNF-213ENST00000525950 SLC9A1P19634 815 aa8.7□□□□□ -1.02
BDNF-213ENST00000525950 RPL13P26373 211 aaKnown RBP8.7□□□□□ -1.02
BDNF-213ENST00000525950 TNFAIP8L3Q5GJ75 292 aa8.7□□□□□ -1.02
BDNF-213ENST00000525950 CCHCR1Q8TD31 782 aa8.7□□□□□ -1.02
BDNF-213ENST00000525950 DHX36Q9H2U1 1008 aaKnown RBP8.7□□□□□ -1.02
BDNF-213ENST00000525950 CENPHQ9H3R5 247 aa8.7□□□□□ -1.02
BDNF-213ENST00000525950 VEZTQ9HBM0 779 aa8.7□□□□□ -1.02
BDNF-213ENST00000525950 VAT1LQ9HCJ6 419 aa8.7□□□□□ -1.02
BDNF-213ENST00000525950 MTMR4Q9NYA4 1195 aa8.7□□□□□ -1.02
BDNF-213ENST00000525950 SLC12A4Q9UP95 1085 aa8.7□□□□□ -1.02
BDNF-213ENST00000525950 TTI1O43156 1089 aa8.69□□□□□ -1.02
BDNF-213ENST00000525950 AGTP01019 485 aa8.69□□□□□ -1.02
BDNF-213ENST00000525950 XRCC5P13010 732 aaKnown RBP8.69□□□□□ -1.02
BDNF-213ENST00000525950 LMNB1P20700 586 aa8.69□□□□□ -1.02
BDNF-213ENST00000525950 PSEN1P49768 467 aa8.69□□□□□ -1.02
BDNF-213ENST00000525950 ARID5AQ03989 594 aa8.69□□□□□ -1.02
BDNF-213ENST00000525950 CRYMQ14894 314 aa8.69□□□□□ -1.02
BDNF-213ENST00000525950 ARSHQ5FYA8 562 aa8.69□□□□□ -1.02
BDNF-213ENST00000525950 TLDC1Q6P9B6 456 aa8.69□□□□□ -1.02
BDNF-213ENST00000525950 MAPKAPK5Q8IW41 473 aa8.69□□□□□ -1.02
BDNF-213ENST00000525950 SLFN12Q8IYM2 578 aa8.69□□□□□ -1.02
BDNF-213ENST00000525950 RFFLQ8WZ73 363 aa8.69□□□□□ -1.02
BDNF-213ENST00000525950 SYT11Q9BT88 431 aa8.69□□□□□ -1.02
BDNF-213ENST00000525950 UBA5Q9GZZ9 404 aa8.69□□□□□ -1.02
BDNF-213ENST00000525950 EPB41L4BQ9H329 900 aa8.69□□□□□ -1.02
BDNF-213ENST00000525950 POLD4Q9HCU8 107 aa8.69□□□□□ -1.02
BDNF-213ENST00000525950 TYW1Q9NV66 732 aaKnown RBP8.69□□□□□ -1.02
BDNF-213ENST00000525950 TBX3O15119 743 aa8.69□□□□□ -1.02
BDNF-213ENST00000525950 ITGA4P13612 1032 aa8.69□□□□□ -1.02
BDNF-213ENST00000525950 STAT1P42224 750 aa8.69□□□□□ -1.02
BDNF-213ENST00000525950 LMNB2Q03252 620 aa8.69□□□□□ -1.02
BDNF-213ENST00000525950 SPRED3Q2MJR0 410 aa8.69□□□□□ -1.02
BDNF-213ENST00000525950 C6orf118Q5T5N4 469 aa8.69□□□□□ -1.02
BDNF-213ENST00000525950 ZNF804AQ7Z570 1209 aa8.69□□□□□ -1.02
BDNF-213ENST00000525950 SLF2Q8IX21 1173 aa8.69□□□□□ -1.02
BDNF-213ENST00000525950 NELFCDQ8IXH7 590 aa8.69□□□□□ -1.02
BDNF-213ENST00000525950 SYT2Q8N9I0 419 aaPredicted RBP8.69□□□□□ -1.02
BDNF-213ENST00000525950 OLIG1Q8TAK6 271 aa8.69□□□□□ -1.02
BDNF-213ENST00000525950 ATXN2LQ8WWM7 1075 aaKnown RBP8.69□□□□□ -1.02
BDNF-213ENST00000525950 COA7Q96BR5 231 aa8.69□□□□□ -1.02
BDNF-213ENST00000525950 KIAA1024Q9UPX6 916 aa8.69□□□□□ -1.02
BDNF-213ENST00000525950 FOCADQ5VW36 1801 aa8.69□□□□□ -1.02
BDNF-213ENST00000525950 COL16A1Q07092 1604 aaPredicted RBP8.69□□□□□ -1.02
BDNF-213ENST00000525950 E9PMD0 336 aa8.69□□□□□ -1.02
BDNF-213ENST00000525950 ACTN1P12814 892 aa8.69□□□□□ -1.02
BDNF-213ENST00000525950 KLRC3Q07444 240 aa8.69□□□□□ -1.02
BDNF-213ENST00000525950 PLS1Q14651 629 aa8.69□□□□□ -1.02
BDNF-213ENST00000525950 TBC1D9BQ66K14 1250 aa8.69□□□□□ -1.02
BDNF-213ENST00000525950 DAAM2Q86T65 1068 aa8.69□□□□□ -1.02
BDNF-213ENST00000525950 GPIHBP1Q8IV16 184 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms