RNA–Protein interactions for RNA: ENST00000525906.1

TTC39A-214, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 5

Gene TTC39A, Length 429 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-214ENST00000525906 UGCGQ16739 394 aa16.47■□□□□ 0.23
TTC39A-214ENST00000525906 LEXMQ3ZCV2 418 aa16.47■□□□□ 0.23
TTC39A-214ENST00000525906 AIFM3Q96NN9 605 aa16.47■□□□□ 0.23
TTC39A-214ENST00000525906 PPP1R16BQ96T49 567 aa16.47■□□□□ 0.23
TTC39A-214ENST00000525906 UPF3BQ9BZI7 483 aaKnown RBP16.47■□□□□ 0.23
TTC39A-214ENST00000525906 ERVK-5Q9HDB9 667 aa16.47■□□□□ 0.23
TTC39A-214ENST00000525906 NOC2LQ9Y3T9 749 aaKnown RBP16.47■□□□□ 0.23
TTC39A-214ENST00000525906 MAFBQ9Y5Q3 323 aaPredicted RBP16.47■□□□□ 0.23
TTC39A-214ENST00000525906 SQORQ9Y6N5 450 aa16.47■□□□□ 0.23
TTC39A-214ENST00000525906 COL1A2P08123 1366 aa16.47■□□□□ 0.23
TTC39A-214ENST00000525906 MUC6Q6W4X9 2439 aa16.47■□□□□ 0.23
TTC39A-214ENST00000525906 REC8O95072 547 aa16.46■□□□□ 0.23
TTC39A-214ENST00000525906 IL9P15248 144 aa16.46■□□□□ 0.23
TTC39A-214ENST00000525906 COL9A1P20849 921 aa16.46■□□□□ 0.23
TTC39A-214ENST00000525906 LTBRP36941 435 aa16.46■□□□□ 0.23
TTC39A-214ENST00000525906 BTG3Q14201 252 aaPredicted RBP16.46■□□□□ 0.23
TTC39A-214ENST00000525906 PTPROQ16827 1216 aa16.46■□□□□ 0.23
TTC39A-214ENST00000525906 TIGD5Q53EQ6 642 aa16.46■□□□□ 0.23
TTC39A-214ENST00000525906 FAM160B1Q5W0V3 765 aa16.46■□□□□ 0.23
TTC39A-214ENST00000525906 ZNF746Q6NUN9 644 aaPredicted RBP16.46■□□□□ 0.23
TTC39A-214ENST00000525906 RUFY3Q7L099 469 aa16.46■□□□□ 0.23
TTC39A-214ENST00000525906 NEK9Q8TD19 979 aa16.46■□□□□ 0.23
TTC39A-214ENST00000525906 EPHX3Q9H6B9 360 aa16.46■□□□□ 0.23
TTC39A-214ENST00000525906 HCSTQ9UBK5 93 aa16.46■□□□□ 0.23
TTC39A-214ENST00000525906 MSH4O15457 936 aa16.45■□□□□ 0.22
TTC39A-214ENST00000525906 CSPG5O95196 566 aa16.45■□□□□ 0.22
TTC39A-214ENST00000525906 RPLP2P05387 115 aaKnown RBP16.45■□□□□ 0.22
TTC39A-214ENST00000525906 GTF2F1P35269 517 aaKnown RBP eCLIP16.45■□□□□ 0.22
TTC39A-214ENST00000525906 SETQ01105 290 aaPredicted RBP16.45■□□□□ 0.22
TTC39A-214ENST00000525906 KIZQ2M2Z5 673 aa16.45■□□□□ 0.22
TTC39A-214ENST00000525906 PAN2Q504Q3 1202 aaKnown RBP16.45■□□□□ 0.22
TTC39A-214ENST00000525906 ZNF484Q5JVG2 852 aa16.45■□□□□ 0.22
TTC39A-214ENST00000525906 MIS18BP1Q6P0N0 1132 aa16.45■□□□□ 0.22
TTC39A-214ENST00000525906 TRMT1LQ7Z2T5 733 aaKnown RBP16.45■□□□□ 0.22
TTC39A-214ENST00000525906 NPAS4Q8IUM7 802 aa16.45■□□□□ 0.22
TTC39A-214ENST00000525906 LINC01465Q8N7H1 131 aa16.45■□□□□ 0.22
TTC39A-214ENST00000525906 CCDC12Q8WUD4 166 aaPredicted RBP16.45■□□□□ 0.22
TTC39A-214ENST00000525906 C11orf16Q9NQ32 467 aa16.45■□□□□ 0.22
TTC39A-214ENST00000525906 TBC1D22BQ9NU19 505 aa16.45■□□□□ 0.22
TTC39A-214ENST00000525906 GINS2Q9Y248 185 aa16.45■□□□□ 0.22
TTC39A-214ENST00000525906 M0R2N6 131 aa16.44■□□□□ 0.22
TTC39A-214ENST00000525906 VTNP04004 478 aa16.44■□□□□ 0.22
TTC39A-214ENST00000525906 GNA11P29992 359 aa16.44■□□□□ 0.22
TTC39A-214ENST00000525906 CLCN3P51790 818 aa16.44■□□□□ 0.22
TTC39A-214ENST00000525906 DLX2Q07687 328 aaPredicted RBP16.44■□□□□ 0.22
TTC39A-214ENST00000525906 HYAL1Q12794 435 aa16.44■□□□□ 0.22
TTC39A-214ENST00000525906 CTC1Q2NKJ3 1217 aa16.44■□□□□ 0.22
TTC39A-214ENST00000525906 FAM228AQ86W67 206 aa16.44■□□□□ 0.22
TTC39A-214ENST00000525906 FAM178BQ8IXR5 827 aa16.44■□□□□ 0.22
TTC39A-214ENST00000525906 CMTR2Q8IYT2 770 aaKnown RBP16.44■□□□□ 0.22
TTC39A-214ENST00000525906 NME8Q8N427 588 aa16.44■□□□□ 0.22
TTC39A-214ENST00000525906 C11orf84Q9BUA3 381 aaPredicted RBP16.44■□□□□ 0.22
TTC39A-214ENST00000525906 FTHL17Q9BXU8 183 aa16.44■□□□□ 0.22
TTC39A-214ENST00000525906 NSUN3Q9H649 340 aaKnown RBP16.44■□□□□ 0.22
TTC39A-214ENST00000525906 ALG13Q9NP73 1137 aaKnown RBP16.44■□□□□ 0.22
TTC39A-214ENST00000525906 GABBR1Q9UBS5 961 aa16.44■□□□□ 0.22
TTC39A-214ENST00000525906 GRXCR2A6NFK2 248 aa16.43■□□□□ 0.22
TTC39A-214ENST00000525906 M0QZ92 97 aa16.43■□□□□ 0.22
TTC39A-214ENST00000525906 GPR32O75388 356 aa16.43■□□□□ 0.22
TTC39A-214ENST00000525906 TDP2O95551 362 aa16.43■□□□□ 0.22
TTC39A-214ENST00000525906 ITGB1P05556 798 aa16.43■□□□□ 0.22
TTC39A-214ENST00000525906 RB1P06400 928 aa16.43■□□□□ 0.22
TTC39A-214ENST00000525906 PSMA5P28066 241 aa16.43■□□□□ 0.22
TTC39A-214ENST00000525906 NFX1Q12986 1120 aaKnown RBP16.43■□□□□ 0.22
TTC39A-214ENST00000525906 MCTP2Q6DN12 878 aa16.43■□□□□ 0.22
TTC39A-214ENST00000525906 PTCRAQ6ISU1 281 aaPredicted RBP16.43■□□□□ 0.22
TTC39A-214ENST00000525906 SMAP1Q8IYB5 467 aaPredicted RBP16.43■□□□□ 0.22
TTC39A-214ENST00000525906 CCDC148Q8NFR7 591 aa16.43■□□□□ 0.22
TTC39A-214ENST00000525906 BBXQ8WY36 941 aaPredicted RBP16.43■□□□□ 0.22
TTC39A-214ENST00000525906 SLC5A5Q92911 643 aa16.43■□□□□ 0.22
TTC39A-214ENST00000525906 PABPC5Q96DU9 382 aaKnown RBP16.43■□□□□ 0.22
TTC39A-214ENST00000525906 OSMRQ99650 979 aa16.43■□□□□ 0.22
TTC39A-214ENST00000525906 UNC45AQ9H3U1 944 aa16.43■□□□□ 0.22
TTC39A-214ENST00000525906 ST3GAL5Q9UNP4 418 aa16.43■□□□□ 0.22
TTC39A-214ENST00000525906 PLAGL2Q9UPG8 496 aa16.43■□□□□ 0.22
TTC39A-214ENST00000525906 PCDHGC5Q9Y5F6 944 aa16.43■□□□□ 0.22
TTC39A-214ENST00000525906 PCDHA10Q9Y5I2 948 aa16.43■□□□□ 0.22
TTC39A-214ENST00000525906 TMEM150BA6NC51 233 aa16.42■□□□□ 0.22
TTC39A-214ENST00000525906 C9IYK1 514 aa16.42■□□□□ 0.22
TTC39A-214ENST00000525906 LINC01565O15544 149 aa16.42■□□□□ 0.22
TTC39A-214ENST00000525906 TBX10O75333 385 aa16.42■□□□□ 0.22
TTC39A-214ENST00000525906 RPS6KA5O75582 802 aa16.42■□□□□ 0.22
TTC39A-214ENST00000525906 MMP1P03956 469 aa16.42■□□□□ 0.22
TTC39A-214ENST00000525906 PSAPP07602 524 aa16.42■□□□□ 0.22
TTC39A-214ENST00000525906 IBSPP21815 317 aaPredicted RBP16.42■□□□□ 0.22
TTC39A-214ENST00000525906 IRS1P35568 1242 aa16.42■□□□□ 0.22
TTC39A-214ENST00000525906 AKAP17AQ02040 695 aaKnown RBP16.42■□□□□ 0.22
TTC39A-214ENST00000525906 DSC3Q14574 896 aa16.42■□□□□ 0.22
TTC39A-214ENST00000525906 B3GNT9Q6UX72 402 aa16.42■□□□□ 0.22
TTC39A-214ENST00000525906 CKAP2LQ8IYA6 745 aa16.42■□□□□ 0.22
TTC39A-214ENST00000525906 LRRC71Q8N4P6 559 aa16.42■□□□□ 0.22
TTC39A-214ENST00000525906 BICD2Q8TD16 824 aa16.42■□□□□ 0.22
TTC39A-214ENST00000525906 TBCKQ8TEA7 893 aa16.42■□□□□ 0.22
TTC39A-214ENST00000525906 TNPO1Q92973 898 aaKnown RBP16.42■□□□□ 0.22
TTC39A-214ENST00000525906 ADAM2Q99965 735 aa16.42■□□□□ 0.22
TTC39A-214ENST00000525906 TM6SF1Q9BZW5 370 aa16.42■□□□□ 0.22
TTC39A-214ENST00000525906 ADAMTS10Q9H324 1103 aa16.42■□□□□ 0.22
TTC39A-214ENST00000525906 SH3GLB2Q9NR46 395 aa16.42■□□□□ 0.22
TTC39A-214ENST00000525906 CYP46A1Q9Y6A2 500 aa16.42■□□□□ 0.22
TTC39A-214ENST00000525906 WDR64B1ANS9 1081 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms