RNA–Protein interactions for RNA: ENST00000525116.5

CASP4-205, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 684 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-205ENST00000525116 ZBED4O75132 1171 aa8.24□□□□□ -1.09
CASP4-205ENST00000525116 RGS9O75916 674 aaPredicted RBP8.24□□□□□ -1.09
CASP4-205ENST00000525116 CDK7P50613 346 aa8.24□□□□□ -1.09
CASP4-205ENST00000525116 BEX3Q00994 111 aa8.24□□□□□ -1.09
CASP4-205ENST00000525116 SRSF11Q05519 484 aaKnown RBP8.24□□□□□ -1.09
CASP4-205ENST00000525116 KLRC3Q07444 240 aa8.24□□□□□ -1.09
CASP4-205ENST00000525116 ADGRE1Q14246 886 aa8.24□□□□□ -1.09
CASP4-205ENST00000525116 CCDC144BQ3MJ40 725 aa8.24□□□□□ -1.09
CASP4-205ENST00000525116 ZNF787Q6DD87 383 aa8.24□□□□□ -1.09
CASP4-205ENST00000525116 PSAPL1Q6NUJ1 521 aa8.24□□□□□ -1.09
CASP4-205ENST00000525116 CTR9Q6PD62 1173 aa8.24□□□□□ -1.09
CASP4-205ENST00000525116 NOL8Q76FK4 1167 aaKnown RBP8.24□□□□□ -1.09
CASP4-205ENST00000525116 GPR161Q8N6U8 529 aaKnown RBP8.24□□□□□ -1.09
CASP4-205ENST00000525116 PCSK9Q8NBP7 692 aaKnown RBP8.24□□□□□ -1.09
CASP4-205ENST00000525116 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.24□□□□□ -1.09
CASP4-205ENST00000525116 ATXN2LQ8WWM7 1075 aaKnown RBP8.24□□□□□ -1.09
CASP4-205ENST00000525116 CHMP4CQ96CF2 233 aa8.24□□□□□ -1.09
CASP4-205ENST00000525116 KIF1BPQ96EK5 621 aa8.24□□□□□ -1.09
CASP4-205ENST00000525116 ASB2Q96Q27 587 aa8.24□□□□□ -1.09
CASP4-205ENST00000525116 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.24□□□□□ -1.09
CASP4-205ENST00000525116 NKX2-4Q9H2Z4 354 aa8.24□□□□□ -1.09
CASP4-205ENST00000525116 MKNK2Q9HBH9 465 aa8.24□□□□□ -1.09
CASP4-205ENST00000525116 RAVER2Q9HCJ3 691 aaKnown RBP8.24□□□□□ -1.09
CASP4-205ENST00000525116 THEGQ9P2T0 379 aa8.24□□□□□ -1.09
CASP4-205ENST00000525116 CLIP2Q9UDT6 1046 aa8.24□□□□□ -1.09
CASP4-205ENST00000525116 MSRAQ9UJ68 235 aa8.24□□□□□ -1.09
CASP4-205ENST00000525116 ISY1Q9ULR0 285 aaKnown RBP8.24□□□□□ -1.09
CASP4-205ENST00000525116 XIRP2A4UGR9 3374 aa8.24□□□□□ -1.09
CASP4-205ENST00000525116 REV3LO60673 3130 aa8.24□□□□□ -1.09
CASP4-205ENST00000525116 ELP1O95163 1332 aa8.24□□□□□ -1.09
CASP4-205ENST00000525116 MROH7Q68CQ1 1323 aa8.24□□□□□ -1.09
CASP4-205ENST00000525116 SYNGAP1Q96PV0 1343 aa8.24□□□□□ -1.09
CASP4-205ENST00000525116 DNAJC25-GNG10A0A024R161 153 aa8.23□□□□□ -1.09
CASP4-205ENST00000525116 A0A0U1RQG5 324 aaPredicted RBP8.23□□□□□ -1.09
CASP4-205ENST00000525116 TERTO14746 1132 aaKnown RBP8.23□□□□□ -1.09
CASP4-205ENST00000525116 TLR3O15455 904 aaKnown RBP8.23□□□□□ -1.09
CASP4-205ENST00000525116 NDUFB10O96000 172 aa8.23□□□□□ -1.09
CASP4-205ENST00000525116 FGBP02675 491 aa8.23□□□□□ -1.09
CASP4-205ENST00000525116 GBP2P32456 591 aaPredicted RBP8.23□□□□□ -1.09
CASP4-205ENST00000525116 GJA9P57773 515 aa8.23□□□□□ -1.09
CASP4-205ENST00000525116 RACK1P63244 317 aaKnown RBP8.23□□□□□ -1.09
CASP4-205ENST00000525116 MRPS5P82675 430 aaKnown RBP8.23□□□□□ -1.09
CASP4-205ENST00000525116 PSRC1Q6PGN9 363 aaPredicted RBP8.23□□□□□ -1.09
CASP4-205ENST00000525116 MAMDC4Q6UXC1 1216 aa8.23□□□□□ -1.09
CASP4-205ENST00000525116 OTOP2Q7RTS6 562 aa8.23□□□□□ -1.09
CASP4-205ENST00000525116 MSL3Q8N5Y2 521 aaKnown RBP8.23□□□□□ -1.09
CASP4-205ENST00000525116 PRPF38AQ8NAV1 312 aaKnown RBP8.23□□□□□ -1.09
CASP4-205ENST00000525116 SLC43A3Q8NBI5 491 aa8.23□□□□□ -1.09
CASP4-205ENST00000525116 TTC9Q92623 222 aa8.23□□□□□ -1.09
CASP4-205ENST00000525116 IRF7Q92985 503 aa8.23□□□□□ -1.09
CASP4-205ENST00000525116 NECAB3Q96P71 396 aaPredicted RBP8.23□□□□□ -1.09
CASP4-205ENST00000525116 LPIN3Q9BQK8 851 aa8.23□□□□□ -1.09
CASP4-205ENST00000525116 LACRTQ9GZZ8 138 aa8.23□□□□□ -1.09
CASP4-205ENST00000525116 PUS7LQ9H0K6 701 aaKnown RBP8.23□□□□□ -1.09
CASP4-205ENST00000525116 MUC3BQ9H195 1237 aa8.23□□□□□ -1.09
CASP4-205ENST00000525116 SRA1Q9HD15 236 aaKnown RBP8.23□□□□□ -1.09
CASP4-205ENST00000525116 IL23AQ9NPF7 189 aa8.23□□□□□ -1.09
CASP4-205ENST00000525116 HOMER2Q9NSB8 354 aa8.23□□□□□ -1.09
CASP4-205ENST00000525116 BDP1A6H8Y1 2624 aa8.23□□□□□ -1.09
CASP4-205ENST00000525116 ROBO3Q96MS0 1386 aa8.22□□□□□ -1.09
CASP4-205ENST00000525116 CELA3AP09093 270 aa8.22□□□□□ -1.09
CASP4-205ENST00000525116 ATP5JP18859 108 aa8.22□□□□□ -1.09
CASP4-205ENST00000525116 PTGS1P23219 599 aa8.22□□□□□ -1.09
CASP4-205ENST00000525116 RABGGTBP53611 331 aa8.22□□□□□ -1.09
CASP4-205ENST00000525116 CCL23P55773 120 aa8.22□□□□□ -1.09
CASP4-205ENST00000525116 HNRNPUQ00839 825 aaKnown RBP eCLIP8.22□□□□□ -1.09
CASP4-205ENST00000525116 CNTN2Q02246 1040 aa8.22□□□□□ -1.09
CASP4-205ENST00000525116 PCDH1Q08174 1060 aa8.22□□□□□ -1.09
CASP4-205ENST00000525116 UBE3CQ15386 1083 aa8.22□□□□□ -1.09
CASP4-205ENST00000525116 RAB30Q15771 203 aa8.22□□□□□ -1.09
CASP4-205ENST00000525116 AKNAD1Q5T1N1 836 aa8.22□□□□□ -1.09
CASP4-205ENST00000525116 RASIP1Q5U651 963 aa8.22□□□□□ -1.09
CASP4-205ENST00000525116 DIEXFQ68CQ4 756 aaKnown RBP8.22□□□□□ -1.09
CASP4-205ENST00000525116 ZSCAN25Q6NSZ9 544 aa8.22□□□□□ -1.09
CASP4-205ENST00000525116 CXCL17Q6UXB2 119 aa8.22□□□□□ -1.09
CASP4-205ENST00000525116 ARMCX2Q7L311 632 aa8.22□□□□□ -1.09
CASP4-205ENST00000525116 FAM126BQ8IXS8 530 aa8.22□□□□□ -1.09
CASP4-205ENST00000525116 CCDC144CPQ8IYA2 1237 aa8.22□□□□□ -1.09
CASP4-205ENST00000525116 TMEM74Q96NL1 305 aa8.22□□□□□ -1.09
CASP4-205ENST00000525116 UHRF1Q96T88 793 aaPredicted RBP8.22□□□□□ -1.09
CASP4-205ENST00000525116 MDFIQ99750 246 aa8.22□□□□□ -1.09
CASP4-205ENST00000525116 HAUS7Q99871 368 aa8.22□□□□□ -1.09
CASP4-205ENST00000525116 ADAM19Q9H013 955 aa8.22□□□□□ -1.09
CASP4-205ENST00000525116 TRPV6Q9H1D0 765 aa8.22□□□□□ -1.09
CASP4-205ENST00000525116 ABHD16BQ9H3Z7 469 aa8.22□□□□□ -1.09
CASP4-205ENST00000525116 SLC28A3Q9HAS3 691 aa8.22□□□□□ -1.09
CASP4-205ENST00000525116 TRIM33Q9UPN9 1127 aa8.22□□□□□ -1.09
CASP4-205ENST00000525116 YBX2Q9Y2T7 364 aaKnown RBP8.22□□□□□ -1.09
CASP4-205ENST00000525116 DDX49Q9Y6V7 483 aaKnown RBP8.22□□□□□ -1.09
CASP4-205ENST00000525116 UMODL1Q5DID0 1318 aa8.22□□□□□ -1.09
CASP4-205ENST00000525116 CHD7Q9P2D1 2997 aa8.21□□□□□ -1.09
CASP4-205ENST00000525116 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.21□□□□□ -1.1
CASP4-205ENST00000525116 CTAGE5O15320 804 aa8.21□□□□□ -1.1
CASP4-205ENST00000525116 RAB11FIP3O75154 756 aa8.21□□□□□ -1.1
CASP4-205ENST00000525116 HMMRO75330 724 aa8.21□□□□□ -1.1
CASP4-205ENST00000525116 PRDM1O75626 825 aa8.21□□□□□ -1.1
CASP4-205ENST00000525116 CD4P01730 458 aa8.21□□□□□ -1.1
CASP4-205ENST00000525116 MYOGP15173 224 aa8.21□□□□□ -1.1
CASP4-205ENST00000525116 CST5P28325 142 aaPredicted RBP8.21□□□□□ -1.1
CASP4-205ENST00000525116 CDC27P30260 824 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms