RNA–Protein interactions for RNA: ENST00000524534.5

PTPRK-217, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 2,441 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-217ENST00000524534 MBOAT7Q96N66 472 aa12.54□□□□□ -0.4
PTPRK-217ENST00000524534 NRAPQ86VF7 1730 aa12.54□□□□□ -0.4
PTPRK-217ENST00000524534 MYH7BA7E2Y1 1941 aa12.54□□□□□ -0.4
PTPRK-217ENST00000524534 LOC102724159A0A0B4J2E5 919 aa12.53□□□□□ -0.4
PTPRK-217ENST00000524534 DCDC2CA8MYV0 355 aa12.53□□□□□ -0.4
PTPRK-217ENST00000524534 DNM1LO00429 736 aa12.53□□□□□ -0.4
PTPRK-217ENST00000524534 AKAP3O75969 853 aa12.53□□□□□ -0.4
PTPRK-217ENST00000524534 TTLL1O95922 423 aa12.53□□□□□ -0.4
PTPRK-217ENST00000524534 MAGOHP61326 146 aaKnown RBP12.53□□□□□ -0.4
PTPRK-217ENST00000524534 DHX9Q08211 1270 aaKnown RBP12.53□□□□□ -0.4
PTPRK-217ENST00000524534 PWP2Q15269 919 aaKnown RBP12.53□□□□□ -0.4
PTPRK-217ENST00000524534 SPRED3Q2MJR0 410 aa12.53□□□□□ -0.4
PTPRK-217ENST00000524534 LACTB2Q53H82 288 aaPredicted RBP12.53□□□□□ -0.4
PTPRK-217ENST00000524534 ANKRD20A8PQ5CZ79 823 aa12.53□□□□□ -0.4
PTPRK-217ENST00000524534 RPAINQ86UA6 219 aa12.53□□□□□ -0.4
PTPRK-217ENST00000524534 CLEC10AQ8IUN9 316 aa12.53□□□□□ -0.4
PTPRK-217ENST00000524534 OLIG1Q8TAK6 271 aa12.53□□□□□ -0.4
PTPRK-217ENST00000524534 MAGOHBQ96A72 148 aaKnown RBP12.53□□□□□ -0.4
PTPRK-217ENST00000524534 TLCD1Q96CP7 247 aa12.53□□□□□ -0.4
PTPRK-217ENST00000524534 CCDC114Q96M63 670 aa12.53□□□□□ -0.4
PTPRK-217ENST00000524534 JPH2Q9BR39 696 aaPredicted RBP12.53□□□□□ -0.4
PTPRK-217ENST00000524534 MXD3Q9BW11 206 aa12.53□□□□□ -0.4
PTPRK-217ENST00000524534 ZHX3Q9H4I2 956 aa12.53□□□□□ -0.4
PTPRK-217ENST00000524534 CD248Q9HCU0 757 aa12.53□□□□□ -0.4
PTPRK-217ENST00000524534 SPATA31A5Q5VU36 1347 aa12.53□□□□□ -0.4
PTPRK-217ENST00000524534 SPATA31A7Q8IWB4 1347 aa12.53□□□□□ -0.4
PTPRK-217ENST00000524534 GOLGA6L7A0A1B0GV03 622 aa12.53□□□□□ -0.4
PTPRK-217ENST00000524534 CALUO43852 315 aaPredicted RBP12.53□□□□□ -0.4
PTPRK-217ENST00000524534 PPFIA2O75334 1257 aa12.53□□□□□ -0.4
PTPRK-217ENST00000524534 STAT3P40763 770 aa12.53□□□□□ -0.4
PTPRK-217ENST00000524534 DPP8Q6V1X1 898 aaPredicted RBP12.53□□□□□ -0.4
PTPRK-217ENST00000524534 BARGINQ6ZT62 677 aa12.53□□□□□ -0.4
PTPRK-217ENST00000524534 DAAM2Q86T65 1068 aa12.53□□□□□ -0.4
PTPRK-217ENST00000524534 SLF2Q8IX21 1173 aa12.53□□□□□ -0.4
PTPRK-217ENST00000524534 ATP8B4Q8TF62 1192 aa12.53□□□□□ -0.4
PTPRK-217ENST00000524534 UIMC1Q96RL1 719 aa12.53□□□□□ -0.4
PTPRK-217ENST00000524534 CELF4Q9BZC1 486 aaKnown RBP12.53□□□□□ -0.4
PTPRK-217ENST00000524534 METTL14Q9HCE5 456 aaKnown RBP12.53□□□□□ -0.4
PTPRK-217ENST00000524534 UTP11Q9Y3A2 253 aaKnown RBP12.53□□□□□ -0.4
PTPRK-217ENST00000524534 C10orf71Q711Q0 1435 aa12.53□□□□□ -0.4
PTPRK-217ENST00000524534 ARFGEF1Q9Y6D6 1849 aa12.53□□□□□ -0.4
PTPRK-217ENST00000524534 POTEFA5A3E0 1075 aa12.52□□□□□ -0.4
PTPRK-217ENST00000524534 USP17L10C9JJH3 530 aa12.52□□□□□ -0.4
PTPRK-217ENST00000524534 SLC16A3O15427 465 aaKnown RBP12.52□□□□□ -0.4
PTPRK-217ENST00000524534 GFPT2O94808 682 aa12.52□□□□□ -0.4
PTPRK-217ENST00000524534 POTEIP0CG38 1075 aa12.52□□□□□ -0.4
PTPRK-217ENST00000524534 EIF3BP55884 814 aaKnown RBP12.52□□□□□ -0.4
PTPRK-217ENST00000524534 GPSM2P81274 684 aa12.52□□□□□ -0.4
PTPRK-217ENST00000524534 SPIRE1Q08AE8 756 aa12.52□□□□□ -0.4
PTPRK-217ENST00000524534 BMT2Q1RMZ1 405 aa12.52□□□□□ -0.4
PTPRK-217ENST00000524534 KRT71Q3SY84 523 aa12.52□□□□□ -0.4
PTPRK-217ENST00000524534 POTEGQ6S5H5 508 aa12.52□□□□□ -0.4
PTPRK-217ENST00000524534 POTEEQ6S8J3 1075 aa12.52□□□□□ -0.4
PTPRK-217ENST00000524534 SFR1Q86XK3 245 aa12.52□□□□□ -0.4
PTPRK-217ENST00000524534 CATSPER3Q86XQ3 398 aa12.52□□□□□ -0.4
PTPRK-217ENST00000524534 CACNA2D3Q8IZS8 1091 aa12.52□□□□□ -0.4
PTPRK-217ENST00000524534 SYT2Q8N9I0 419 aaPredicted RBP12.52□□□□□ -0.4
PTPRK-217ENST00000524534 SLC30A5Q8TAD4 765 aa12.52□□□□□ -0.4
PTPRK-217ENST00000524534 U2AF1L4Q8WU68 220 aaKnown RBP12.52□□□□□ -0.4
PTPRK-217ENST00000524534 SLC35C1Q96A29 364 aa12.52□□□□□ -0.4
PTPRK-217ENST00000524534 CENPTQ96BT3 561 aa12.52□□□□□ -0.4
PTPRK-217ENST00000524534 PSMD1Q99460 953 aa12.52□□□□□ -0.4
PTPRK-217ENST00000524534 CNOT10Q9H9A5 744 aaKnown RBP12.52□□□□□ -0.4
PTPRK-217ENST00000524534 LRRC4CQ9HCJ2 640 aa12.52□□□□□ -0.4
PTPRK-217ENST00000524534 AMFRQ9UKV5 643 aa12.52□□□□□ -0.4
PTPRK-217ENST00000524534 GTPBP10A4D1E9 387 aaKnown RBP12.52□□□□□ -0.41
PTPRK-217ENST00000524534 FERP16591 822 aa12.52□□□□□ -0.41
PTPRK-217ENST00000524534 DRD4P21917 467 aa12.52□□□□□ -0.41
PTPRK-217ENST00000524534 RFC4P35249 363 aa12.52□□□□□ -0.41
PTPRK-217ENST00000524534 GALCP54803 685 aa12.52□□□□□ -0.41
PTPRK-217ENST00000524534 PSMC6P62333 389 aa12.52□□□□□ -0.41
PTPRK-217ENST00000524534 PPARDQ03181 441 aa12.52□□□□□ -0.41
PTPRK-217ENST00000524534 DCAF17Q5H9S7 520 aaPredicted RBP12.52□□□□□ -0.41
PTPRK-217ENST00000524534 GPATCH4Q5T3I0 446 aaKnown RBP12.52□□□□□ -0.41
PTPRK-217ENST00000524534 SLFN12Q8IYM2 578 aa12.52□□□□□ -0.41
PTPRK-217ENST00000524534 FUKQ8N0W3 1084 aa12.52□□□□□ -0.41
PTPRK-217ENST00000524534 GPATCH11Q8N954 259 aa12.52□□□□□ -0.41
PTPRK-217ENST00000524534 LNX1Q8TBB1 728 aaPredicted RBP12.52□□□□□ -0.41
PTPRK-217ENST00000524534 P3H4Q92791 437 aa12.52□□□□□ -0.41
PTPRK-217ENST00000524534 REEP2Q9BRK0 252 aa12.52□□□□□ -0.41
PTPRK-217ENST00000524534 TACO1Q9BSH4 297 aaKnown RBP12.52□□□□□ -0.41
PTPRK-217ENST00000524534 GLT8D2Q9H1C3 349 aa12.52□□□□□ -0.41
PTPRK-217ENST00000524534 TYW1Q9NV66 732 aaKnown RBP12.52□□□□□ -0.41
PTPRK-217ENST00000524534 DIS3Q9Y2L1 958 aaKnown RBP12.52□□□□□ -0.41
PTPRK-217ENST00000524534 ASTN1O14525 1302 aa12.52□□□□□ -0.41
PTPRK-217ENST00000524534 NCANO14594 1321 aa12.52□□□□□ -0.41
PTPRK-217ENST00000524534 USP17L15C9J2P7 530 aa12.51□□□□□ -0.41
PTPRK-217ENST00000524534 USP17L13C9JLJ4 530 aa12.51□□□□□ -0.41
PTPRK-217ENST00000524534 USP17L11C9JVI0 530 aa12.51□□□□□ -0.41
PTPRK-217ENST00000524534 USP17L18D6R9N7 530 aa12.51□□□□□ -0.41
PTPRK-217ENST00000524534 USP17L22D6RA61 530 aa12.51□□□□□ -0.41
PTPRK-217ENST00000524534 USP17L17D6RBQ6 530 aa12.51□□□□□ -0.41
PTPRK-217ENST00000524534 USP17L19D6RCP7 530 aa12.51□□□□□ -0.41
PTPRK-217ENST00000524534 USP17L20D6RJB6 530 aa12.51□□□□□ -0.41
PTPRK-217ENST00000524534 DDX3YO15523 660 aaKnown RBP12.51□□□□□ -0.41
PTPRK-217ENST00000524534 NR3C1P04150 777 aa12.51□□□□□ -0.41
PTPRK-217ENST00000524534 SLC16A2P36021 539 aa12.51□□□□□ -0.41
PTPRK-217ENST00000524534 USP17L24Q0WX57 530 aa12.51□□□□□ -0.41
PTPRK-217ENST00000524534 KCTD19Q17RG1 926 aaPredicted RBP12.51□□□□□ -0.41
PTPRK-217ENST00000524534 PREPLQ4J6C6 727 aaPredicted RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms