RNA–Protein interactions for RNA: ENST00000524356.1

PCM1-223, Transcript of pericentriolar material 1, human

TSL 2

Gene PCM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-223	ENST00000524356	PRSS53	Q2L4Q9	553 aa		5.85	□□□□□ -1.47
PCM1-223	ENST00000524356	ACBD5	Q5T8D3	534 aa	Predicted RBP	5.85	□□□□□ -1.47
PCM1-223	ENST00000524356	PIP4K2C	Q8TBX8	421 aa		5.85	□□□□□ -1.47
PCM1-223	ENST00000524356	CRBN	Q96SW2	442 aa		5.85	□□□□□ -1.47
PCM1-223	ENST00000524356	APBA2	Q99767	749 aa		5.85	□□□□□ -1.47
PCM1-223	ENST00000524356	PRDM16	Q9HAZ2	1276 aa		5.85	□□□□□ -1.47
PCM1-223	ENST00000524356	GIT1	Q9Y2X7	761 aa		5.85	□□□□□ -1.47
PCM1-223	ENST00000524356	PPRC1	Q5VV67	1664 aa	Known RBP	5.85	□□□□□ -1.47
PCM1-223	ENST00000524356	INO80B-WBP1	J3KQ70	363 aa		5.84	□□□□□ -1.47
PCM1-223	ENST00000524356	CUTA	O60888	179 aa		5.84	□□□□□ -1.47
PCM1-223	ENST00000524356	PARN	O95453	639 aa	Known RBP	5.84	□□□□□ -1.47
PCM1-223	ENST00000524356	LMNA	P02545	664 aa	Known RBP	5.84	□□□□□ -1.47
PCM1-223	ENST00000524356	ZNF76	P36508	570 aa		5.84	□□□□□ -1.47
PCM1-223	ENST00000524356	LTBR	P36941	435 aa		5.84	□□□□□ -1.47
PCM1-223	ENST00000524356	GIPR	P48546	466 aa		5.84	□□□□□ -1.47
PCM1-223	ENST00000524356	RBL2	Q08999	1139 aa		5.84	□□□□□ -1.47
PCM1-223	ENST00000524356	PAN2	Q504Q3	1202 aa	Known RBP	5.84	□□□□□ -1.47
PCM1-223	ENST00000524356	SPTY2D1	Q68D10	685 aa	Predicted RBP	5.84	□□□□□ -1.47
PCM1-223	ENST00000524356	VHLL	Q6RSH7	139 aa		5.84	□□□□□ -1.47
PCM1-223	ENST00000524356	SGMS1	Q86VZ5	419 aa		5.84	□□□□□ -1.47
PCM1-223	ENST00000524356	TICAM2	Q86XR7	235 aa		5.84	□□□□□ -1.47
PCM1-223	ENST00000524356	INO80B	Q9C086	356 aa	Predicted RBP	5.84	□□□□□ -1.47
PCM1-223	ENST00000524356	OSBPL2	Q9H1P3	480 aa		5.84	□□□□□ -1.47
PCM1-223	ENST00000524356	METTL14	Q9HCE5	456 aa	Known RBP	5.84	□□□□□ -1.47
PCM1-223	ENST00000524356	SLC6A20	Q9NP91	592 aa		5.84	□□□□□ -1.47
PCM1-223	ENST00000524356	DISP3	Q9P2K9	1392 aa		5.83	□□□□□ -1.48
PCM1-223	ENST00000524356	ESYT3	A0FGR9	886 aa		5.83	□□□□□ -1.48
PCM1-223	ENST00000524356	KRIT1	O00522	736 aa		5.83	□□□□□ -1.48
PCM1-223	ENST00000524356	ARHGAP6	O43182	974 aa		5.83	□□□□□ -1.48
PCM1-223	ENST00000524356	TPD52L2	O43399	206 aa	Known RBP	5.83	□□□□□ -1.48
PCM1-223	ENST00000524356	LTF	P02788	710 aa		5.83	□□□□□ -1.48
PCM1-223	ENST00000524356	SCG5	P05408	212 aa		5.83	□□□□□ -1.48
PCM1-223	ENST00000524356	PCOLCE	Q15113	449 aa		5.83	□□□□□ -1.48
PCM1-223	ENST00000524356	DENND5A	Q6IQ26	1287 aa		5.83	□□□□□ -1.48
PCM1-223	ENST00000524356	GPR135	Q8IZ08	494 aa		5.83	□□□□□ -1.48
PCM1-223	ENST00000524356	ADARB2	Q9NS39	739 aa	Known RBP	5.83	□□□□□ -1.48
PCM1-223	ENST00000524356	GINM1	Q9NU53	330 aa		5.83	□□□□□ -1.48
PCM1-223	ENST00000524356	PUF60	Q9UHX1	559 aa	Known RBP	5.83	□□□□□ -1.48
PCM1-223	ENST00000524356	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	5.83	□□□□□ -1.48
PCM1-223	ENST00000524356	MRPL42	Q9Y6G3	142 aa	Known RBP	5.83	□□□□□ -1.48
PCM1-223	ENST00000524356	GC	P02774	474 aa		5.82	□□□□□ -1.48
PCM1-223	ENST00000524356	SNRPB2	P08579	225 aa	Known RBP	5.82	□□□□□ -1.48
PCM1-223	ENST00000524356	PDE6A	P16499	860 aa		5.82	□□□□□ -1.48
PCM1-223	ENST00000524356	ZNF37A	P17032	561 aa	Predicted RBP	5.82	□□□□□ -1.48
PCM1-223	ENST00000524356	ETV4	P43268	484 aa		5.82	□□□□□ -1.48
PCM1-223	ENST00000524356	EIF6	P56537	245 aa	Known RBP	5.82	□□□□□ -1.48
PCM1-223	ENST00000524356	KRTAP10-7	P60409	375 aa	Predicted RBP	5.82	□□□□□ -1.48
PCM1-223	ENST00000524356	TUSC3	Q13454	348 aa		5.82	□□□□□ -1.48
PCM1-223	ENST00000524356	RRP1B	Q14684	758 aa	Known RBP	5.82	□□□□□ -1.48
PCM1-223	ENST00000524356	BMS1	Q14692	1282 aa	Known RBP	5.82	□□□□□ -1.48
PCM1-223	ENST00000524356	SF1	Q15637	639 aa	Known RBP	5.82	□□□□□ -1.48
PCM1-223	ENST00000524356	PAPD7	Q5XG87	772 aa	Known RBP	5.82	□□□□□ -1.48
PCM1-223	ENST00000524356	PPIL6	Q8IXY8	311 aa		5.82	□□□□□ -1.48
PCM1-223	ENST00000524356	EXOC8	Q8IYI6	725 aa		5.82	□□□□□ -1.48
PCM1-223	ENST00000524356	PPP1R14A	Q96A00	147 aa		5.82	□□□□□ -1.48
PCM1-223	ENST00000524356	BBC3	Q96PG8	261 aa	Predicted RBP	5.82	□□□□□ -1.48
PCM1-223	ENST00000524356	JAM3	Q9BX67	310 aa		5.82	□□□□□ -1.48
PCM1-223	ENST00000524356	KIAA1683	Q9H0B3	1180 aa		5.82	□□□□□ -1.48
PCM1-223	ENST00000524356	TELO2	Q9Y4R8	837 aa		5.82	□□□□□ -1.48
PCM1-223	ENST00000524356	PCDHGB7	Q9Y5F8	929 aa		5.82	□□□□□ -1.48
PCM1-223	ENST00000524356	CAPN14	A8MX76	684 aa		5.81	□□□□□ -1.48
PCM1-223	ENST00000524356	HOXC12	P31275	282 aa		5.81	□□□□□ -1.48
PCM1-223	ENST00000524356	HHEX	Q03014	270 aa		5.81	□□□□□ -1.48
PCM1-223	ENST00000524356	ARID5A	Q03989	594 aa		5.81	□□□□□ -1.48
PCM1-223	ENST00000524356	GNL2	Q13823	731 aa	Known RBP	5.81	□□□□□ -1.48
PCM1-223	ENST00000524356	GRM7	Q14831	915 aa		5.81	□□□□□ -1.48
PCM1-223	ENST00000524356	ZNF394	Q53GI3	561 aa		5.81	□□□□□ -1.48
PCM1-223	ENST00000524356	CCDC181	Q5TID7	509 aa		5.81	□□□□□ -1.48
PCM1-223	ENST00000524356	MBNL2	Q5VZF2	373 aa	Known RBP	5.81	□□□□□ -1.48
PCM1-223	ENST00000524356	MCF2L2	Q86YR7	1114 aa		5.81	□□□□□ -1.48
PCM1-223	ENST00000524356	SCYL1	Q96KG9	808 aa		5.81	□□□□□ -1.48
PCM1-223	ENST00000524356	BRINP2	Q9C0B6	783 aa		5.81	□□□□□ -1.48
PCM1-223	ENST00000524356	PDGFD	Q9GZP0	370 aa	Predicted RBP	5.81	□□□□□ -1.48
PCM1-223	ENST00000524356	MSL2	Q9HCI7	577 aa		5.81	□□□□□ -1.48
PCM1-223	ENST00000524356	NOP58	Q9Y2X3	529 aa	Known RBP	5.81	□□□□□ -1.48
PCM1-223	ENST00000524356	EPRS	P07814	1512 aa	Known RBP	5.8	□□□□□ -1.48
PCM1-223	ENST00000524356	ERICH3	Q5RHP9	1530 aa		5.8	□□□□□ -1.48
PCM1-223	ENST00000524356	ABCC2	Q92887	1545 aa		5.8	□□□□□ -1.48
PCM1-223	ENST00000524356	KIAA0586	Q9BVV6	1533 aa		5.8	□□□□□ -1.48
PCM1-223	ENST00000524356	RPS6KA4	O75676	772 aa		5.8	□□□□□ -1.48
PCM1-223	ENST00000524356	ITGAV	P06756	1048 aa		5.8	□□□□□ -1.48
PCM1-223	ENST00000524356	FGR	P09769	529 aa		5.8	□□□□□ -1.48
PCM1-223	ENST00000524356	ZNF143	P52747	638 aa	Predicted RBP	5.8	□□□□□ -1.48
PCM1-223	ENST00000524356	ANAPC15	P60006	121 aa		5.8	□□□□□ -1.48
PCM1-223	ENST00000524356	PPP2R5E	Q16537	467 aa		5.8	□□□□□ -1.48
PCM1-223	ENST00000524356	GAREM2	Q75VX8	874 aa		5.8	□□□□□ -1.48
PCM1-223	ENST00000524356	THEMIS	Q8N1K5	641 aa	Predicted RBP	5.8	□□□□□ -1.48
PCM1-223	ENST00000524356	MYH16	Q9H6N6	1097 aa		5.8	□□□□□ -1.48
PCM1-223	ENST00000524356	RIOX1	Q9H6W3	641 aa		5.8	□□□□□ -1.48
PCM1-223	ENST00000524356	PLB1	Q6P1J6	1458 aa		5.79	□□□□□ -1.48
PCM1-223	ENST00000524356	RAPGEF3	O95398	923 aa		5.79	□□□□□ -1.48
PCM1-223	ENST00000524356	MAP4K4	O95819	1239 aa	Predicted RBP	5.79	□□□□□ -1.48
PCM1-223	ENST00000524356	HSD3B2	P26439	372 aa		5.79	□□□□□ -1.48
PCM1-223	ENST00000524356	RACK1	P63244	317 aa	Known RBP	5.79	□□□□□ -1.48
PCM1-223	ENST00000524356	IRX6	P78412	446 aa	Predicted RBP	5.79	□□□□□ -1.48
PCM1-223	ENST00000524356	SYCE2	Q6PIF2	218 aa		5.79	□□□□□ -1.48
PCM1-223	ENST00000524356	LARP4	Q71RC2	724 aa	Known RBP eCLIP	5.79	□□□□□ -1.48
PCM1-223	ENST00000524356	ADGRE4P	Q86SQ3	457 aa		5.79	□□□□□ -1.48
PCM1-223	ENST00000524356	D2HGDH	Q8N465	521 aa		5.79	□□□□□ -1.48
PCM1-223	ENST00000524356	OR6P1	Q8NGX9	317 aa		5.79	□□□□□ -1.48

Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms