RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 TMEM62Q0P6H9 643 aa14.37□□□□□ -0.11
VEGFA-224ENST00000523873 PTPAQ15257 358 aa14.37□□□□□ -0.11
VEGFA-224ENST00000523873 ECM1Q16610 540 aa14.37□□□□□ -0.11
VEGFA-224ENST00000523873 XKR3Q5GH77 459 aa14.37□□□□□ -0.11
VEGFA-224ENST00000523873 DTHD1Q6ZMT9 781 aa14.37□□□□□ -0.11
VEGFA-224ENST00000523873 CATSPER3Q86XQ3 398 aa14.37□□□□□ -0.11
VEGFA-224ENST00000523873 C4orf19Q8IY42 314 aa14.37□□□□□ -0.11
VEGFA-224ENST00000523873 TMEM199Q8N511 208 aa14.37□□□□□ -0.11
VEGFA-224ENST00000523873 CCDC155Q8N6L0 562 aa14.37□□□□□ -0.11
VEGFA-224ENST00000523873 VWCEQ96DN2 955 aa14.37□□□□□ -0.11
VEGFA-224ENST00000523873 CHAMP1Q96JM3 812 aa14.37□□□□□ -0.11
VEGFA-224ENST00000523873 PPP1R16BQ96T49 567 aa14.37□□□□□ -0.11
VEGFA-224ENST00000523873 HSD17B14Q9BPX1 270 aa14.37□□□□□ -0.11
VEGFA-224ENST00000523873 UBE2OQ9C0C9 1292 aaKnown RBP14.37□□□□□ -0.11
VEGFA-224ENST00000523873 BMP2KQ9NSY1 1161 aaPredicted RBP14.37□□□□□ -0.11
VEGFA-224ENST00000523873 TFIP11Q9UBB9 837 aaKnown RBP14.37□□□□□ -0.11
VEGFA-224ENST00000523873 DAXXQ9UER7 740 aaPredicted RBP14.37□□□□□ -0.11
VEGFA-224ENST00000523873 PITPNM1O00562 1244 aa14.36□□□□□ -0.11
VEGFA-224ENST00000523873 SELPP16109 830 aa14.36□□□□□ -0.11
VEGFA-224ENST00000523873 MARCKSP29966 332 aaPredicted RBP14.36□□□□□ -0.11
VEGFA-224ENST00000523873 YWHABP31946 246 aaKnown RBP14.36□□□□□ -0.11
VEGFA-224ENST00000523873 CCT6AP40227 531 aaKnown RBP14.36□□□□□ -0.11
VEGFA-224ENST00000523873 MBTPS1Q14703 1052 aa14.36□□□□□ -0.11
VEGFA-224ENST00000523873 GPNMBQ14956 572 aa14.36□□□□□ -0.11
VEGFA-224ENST00000523873 TARBP2Q15633 366 aaKnown RBP14.36□□□□□ -0.11
VEGFA-224ENST00000523873 C9orf50Q5SZB4 431 aa14.36□□□□□ -0.11
VEGFA-224ENST00000523873 POTEGQ6S5H5 508 aa14.36□□□□□ -0.11
VEGFA-224ENST00000523873 C16orf59Q7L2K0 433 aa14.36□□□□□ -0.11
VEGFA-224ENST00000523873 LRRC71Q8N4P6 559 aa14.36□□□□□ -0.11
VEGFA-224ENST00000523873 IGSF22Q8N9C0 903 aa14.36□□□□□ -0.11
VEGFA-224ENST00000523873 TNPO1Q92973 898 aaKnown RBP14.36□□□□□ -0.11
VEGFA-224ENST00000523873 CEP89Q96ST8 783 aa14.36□□□□□ -0.11
VEGFA-224ENST00000523873 NIFKQ9BYG3 293 aaKnown RBP14.36□□□□□ -0.11
VEGFA-224ENST00000523873 PRO3102Q9H379 93 aa14.36□□□□□ -0.11
VEGFA-224ENST00000523873 ZSWIM4Q9H7M6 989 aa14.36□□□□□ -0.11
VEGFA-224ENST00000523873 LRWD1Q9UFC0 647 aa14.36□□□□□ -0.11
VEGFA-224ENST00000523873 CEP131Q9UPN4 1083 aa14.36□□□□□ -0.11
VEGFA-224ENST00000523873 PCDHA2Q9Y5H9 948 aa14.36□□□□□ -0.11
VEGFA-224ENST00000523873 SMIM35A0A1B0GVV1 85 aa14.35□□□□□ -0.11
VEGFA-224ENST00000523873 NBNO60934 754 aa14.35□□□□□ -0.11
VEGFA-224ENST00000523873 BRD1O95696 1058 aa14.35□□□□□ -0.11
VEGFA-224ENST00000523873 CHRNA1P02708 482 aa14.35□□□□□ -0.11
VEGFA-224ENST00000523873 CLCN3P51790 818 aa14.35□□□□□ -0.11
VEGFA-224ENST00000523873 PPIGQ13427 754 aaKnown RBP eCLIP14.35□□□□□ -0.111e-7■■□□□ 12.6
VEGFA-224ENST00000523873 DRP2Q13474 957 aa14.35□□□□□ -0.11
VEGFA-224ENST00000523873 TCTN1Q2MV58 587 aa14.35□□□□□ -0.11
VEGFA-224ENST00000523873 XKR9Q5GH70 373 aa14.35□□□□□ -0.11
VEGFA-224ENST00000523873 TAF2Q6P1X5 1199 aa14.35□□□□□ -0.11
VEGFA-224ENST00000523873 METTL13Q8N6R0 699 aa14.35□□□□□ -0.11
VEGFA-224ENST00000523873 ERMNQ8TAM6 284 aa14.35□□□□□ -0.11
VEGFA-224ENST00000523873 NEK9Q8TD19 979 aa14.35□□□□□ -0.11
VEGFA-224ENST00000523873 SNX29Q8TEQ0 813 aa14.35□□□□□ -0.11
VEGFA-224ENST00000523873 PIGOQ8TEQ8 1089 aa14.35□□□□□ -0.11
VEGFA-224ENST00000523873 ZNF668Q96K58 619 aaPredicted RBP14.35□□□□□ -0.11
VEGFA-224ENST00000523873 CEP170P1Q96L14 293 aa14.35□□□□□ -0.11
VEGFA-224ENST00000523873 MMTAG2Q9BU76 263 aaKnown RBP14.35□□□□□ -0.11
VEGFA-224ENST00000523873 POLR3CQ9BUI4 534 aaPredicted RBP14.35□□□□□ -0.11
VEGFA-224ENST00000523873 SUGCTQ9HAC7 445 aa14.35□□□□□ -0.11
VEGFA-224ENST00000523873 TUFT1Q9NNX1 390 aa14.35□□□□□ -0.11
VEGFA-224ENST00000523873 CYP26B1Q9NR63 512 aa14.35□□□□□ -0.11
VEGFA-224ENST00000523873 CDY2AQ9Y6F7 541 aa14.35□□□□□ -0.11
VEGFA-224ENST00000523873 RSPH10B2B2RC85 870 aa14.34□□□□□ -0.11
VEGFA-224ENST00000523873 DKC1O60832 514 aaKnown RBP eCLIP14.34□□□□□ -0.11
VEGFA-224ENST00000523873 VTNP04004 478 aa14.34□□□□□ -0.11
VEGFA-224ENST00000523873 RSPH10BP0C881 870 aa14.34□□□□□ -0.11
VEGFA-224ENST00000523873 MRPS6P82932 125 aaKnown RBP14.34□□□□□ -0.11
VEGFA-224ENST00000523873 MGAT3Q09327 533 aa14.34□□□□□ -0.11
VEGFA-224ENST00000523873 TBC1D8BQ0IIM8 1120 aa14.34□□□□□ -0.11
VEGFA-224ENST00000523873 PDIA5Q14554 519 aa14.34□□□□□ -0.11
VEGFA-224ENST00000523873 SHHQ15465 462 aa14.34□□□□□ -0.11
VEGFA-224ENST00000523873 ZRSR1Q15695 479 aaKnown RBP14.34□□□□□ -0.11
VEGFA-224ENST00000523873 ARL6IP4Q66PJ3 421 aaKnown RBP14.34□□□□□ -0.11
VEGFA-224ENST00000523873 EFCAB12Q6NXP0 572 aa14.34□□□□□ -0.11
VEGFA-224ENST00000523873 ZNF365Q70YC5 407 aa14.34□□□□□ -0.11
VEGFA-224ENST00000523873 KIAA0319LQ8IZA0 1049 aa14.34□□□□□ -0.11
VEGFA-224ENST00000523873 PLIN2Q99541 437 aa14.34□□□□□ -0.11
VEGFA-224ENST00000523873 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.34□□□□□ -0.112e-12■■■□□ 14.6
VEGFA-224ENST00000523873 IL23AQ9NPF7 189 aa14.34□□□□□ -0.11
VEGFA-224ENST00000523873 MAGEB2O15479 319 aa14.33□□□□□ -0.12
VEGFA-224ENST00000523873 LYPLA2O95372 231 aa14.33□□□□□ -0.12
VEGFA-224ENST00000523873 BMP15O95972 392 aa14.33□□□□□ -0.12
VEGFA-224ENST00000523873 RPA1P27694 616 aa14.33□□□□□ -0.12
VEGFA-224ENST00000523873 BMP8BP34820 402 aa14.33□□□□□ -0.12
VEGFA-224ENST00000523873 DNM1Q05193 864 aaKnown RBP14.33□□□□□ -0.12
VEGFA-224ENST00000523873 MKRN4PQ13434 485 aaPredicted RBP14.33□□□□□ -0.12
VEGFA-224ENST00000523873 STK38Q15208 465 aa14.33□□□□□ -0.12
VEGFA-224ENST00000523873 FAM26DQ5JW98 314 aa14.33□□□□□ -0.12
VEGFA-224ENST00000523873 SPECC1Q5M775 1068 aa14.33□□□□□ -0.12
VEGFA-224ENST00000523873 TMEM240Q5SV17 173 aa14.33□□□□□ -0.12
VEGFA-224ENST00000523873 HAUS3Q68CZ6 603 aa14.33□□□□□ -0.12
VEGFA-224ENST00000523873 LINC01465Q8N7H1 131 aa14.33□□□□□ -0.12
VEGFA-224ENST00000523873 ZNF396Q96N95 335 aaPredicted RBP14.33□□□□□ -0.12
VEGFA-224ENST00000523873 CLIC6Q96NY7 704 aa14.33□□□□□ -0.12
VEGFA-224ENST00000523873 PNMA5Q96PV4 448 aa14.33□□□□□ -0.12
VEGFA-224ENST00000523873 RAB34Q9BZG1 259 aa14.33□□□□□ -0.12
VEGFA-224ENST00000523873 CDHR5Q9HBB8 845 aa14.33□□□□□ -0.12
VEGFA-224ENST00000523873 DDX19AQ9NUU7 478 aaKnown RBP14.33□□□□□ -0.12
VEGFA-224ENST00000523873 FBXO2Q9UK22 296 aaPredicted RBP14.33□□□□□ -0.12
VEGFA-224ENST00000523873 KIAA1024Q9UPX6 916 aa14.33□□□□□ -0.12
VEGFA-224ENST00000523873 TRPV2Q9Y5S1 764 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms