RNA–Protein interactions for RNA: ENST00000523517.5

IKBKB-228, Transcript of inhibitor of nuclear factor kappa B kinase subunit beta, humanhuman

TSL 1 (best)

Gene IKBKB, Length 2,378 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IKBKB-228ENST00000523517 KIAA0825Q8IV33 1275 aa19.54■□□□□ 0.72
IKBKB-228ENST00000523517 CD302Q8IX05 232 aa19.54■□□□□ 0.72
IKBKB-228ENST00000523517 SH2D3CQ8N5H7 860 aa19.54■□□□□ 0.72
IKBKB-228ENST00000523517 TPCN2Q8NHX9 752 aa19.54■□□□□ 0.72
IKBKB-228ENST00000523517 BCAS4Q8TDM0 211 aa19.54■□□□□ 0.72
IKBKB-228ENST00000523517 RABGAP1Q9Y3P9 1069 aa19.54■□□□□ 0.72
IKBKB-228ENST00000523517 ATP8B3O60423 1300 aa19.54■□□□□ 0.72
IKBKB-228ENST00000523517 EML1O00423 815 aa19.54■□□□□ 0.72
IKBKB-228ENST00000523517 CEP104O60308 925 aa19.54■□□□□ 0.72
IKBKB-228ENST00000523517 TAL1P17542 331 aaPredicted RBP19.54■□□□□ 0.72
IKBKB-228ENST00000523517 HOXA13P31271 388 aaPredicted RBP19.54■□□□□ 0.72
IKBKB-228ENST00000523517 KCNA1Q09470 495 aa19.54■□□□□ 0.72
IKBKB-228ENST00000523517 KCTD16Q68DU8 428 aa19.54■□□□□ 0.72
IKBKB-228ENST00000523517 CYP2W1Q8TAV3 490 aa19.54■□□□□ 0.72
IKBKB-228ENST00000523517 MRIQ9BWK5 157 aa19.54■□□□□ 0.72
IKBKB-228ENST00000523517 GCNT4Q9P109 453 aa19.54■□□□□ 0.72
IKBKB-228ENST00000523517 OPLAHO14841 1288 aa19.53■□□□□ 0.72
IKBKB-228ENST00000523517 CLIC2O15247 247 aa19.53■□□□□ 0.72
IKBKB-228ENST00000523517 ONECUT3O60422 494 aaPredicted RBP19.53■□□□□ 0.72
IKBKB-228ENST00000523517 PODNQ7Z5L7 613 aa19.53■□□□□ 0.72
IKBKB-228ENST00000523517 VPS36Q86VN1 386 aa19.53■□□□□ 0.72
IKBKB-228ENST00000523517 EIF1ADQ8N9N8 165 aaKnown RBP19.53■□□□□ 0.72
IKBKB-228ENST00000523517 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.53■□□□□ 0.725e-12■■■■■ 104.3
IKBKB-228ENST00000523517 TAF1DQ9H5J8 278 aaPredicted RBP19.53■□□□□ 0.72
IKBKB-228ENST00000523517 DBNDD1Q9H9R9 158 aa19.53■□□□□ 0.72
IKBKB-228ENST00000523517 OLFML3Q9NRN5 406 aa19.53■□□□□ 0.72
IKBKB-228ENST00000523517 RGL1Q9NZL6 768 aa19.53■□□□□ 0.72
IKBKB-228ENST00000523517 PCDHB13Q9Y5F0 798 aa19.53■□□□□ 0.72
IKBKB-228ENST00000523517 ADAMTSL1Q8N6G6 1762 aa19.53■□□□□ 0.72
IKBKB-228ENST00000523517 GTPBP10A4D1E9 387 aaKnown RBP19.52■□□□□ 0.72
IKBKB-228ENST00000523517 GDF11O95390 407 aa19.52■□□□□ 0.72
IKBKB-228ENST00000523517 CYP3A4P08684 503 aa19.52■□□□□ 0.72
IKBKB-228ENST00000523517 H2AFZP0C0S5 128 aa19.52■□□□□ 0.72
IKBKB-228ENST00000523517 ZBTB48P10074 688 aaPredicted RBP19.52■□□□□ 0.72
IKBKB-228ENST00000523517 GAP43P17677 238 aa19.52■□□□□ 0.72
IKBKB-228ENST00000523517 ZNF76P36508 570 aa19.52■□□□□ 0.72
IKBKB-228ENST00000523517 RBM5P52756 815 aaKnown RBP eCLIP19.52■□□□□ 0.72
IKBKB-228ENST00000523517 ABCB5Q2M3G0 1257 aa19.52■□□□□ 0.72
IKBKB-228ENST00000523517 H2AFVQ71UI9 128 aa19.52■□□□□ 0.72
IKBKB-228ENST00000523517 BORCS6Q96GS4 357 aa19.52■□□□□ 0.72
IKBKB-228ENST00000523517 ISCUQ9H1K1 167 aa19.52■□□□□ 0.72
IKBKB-228ENST00000523517 SHTN1A0MZ66 631 aa19.52■□□□□ 0.72
IKBKB-228ENST00000523517 UBAP1LF5GYI3 381 aa19.52■□□□□ 0.72
IKBKB-228ENST00000523517 EBAG9O00559 213 aa19.52■□□□□ 0.72
IKBKB-228ENST00000523517 TGFB1I1O43294 461 aa19.52■□□□□ 0.72
IKBKB-228ENST00000523517 ALDH1B1P30837 517 aa19.52■□□□□ 0.72
IKBKB-228ENST00000523517 HSPA9P38646 679 aaKnown RBP19.52■□□□□ 0.72
IKBKB-228ENST00000523517 ERVK-9P63128 1117 aa19.52■□□□□ 0.72
IKBKB-228ENST00000523517 RINT1Q6NUQ1 792 aa19.52■□□□□ 0.72
IKBKB-228ENST00000523517 GJB7Q6PEY0 223 aa19.52■□□□□ 0.72
IKBKB-228ENST00000523517 KCTD17Q8N5Z5 321 aa19.52■□□□□ 0.72
IKBKB-228ENST00000523517 FAM107BQ9H098 131 aa19.52■□□□□ 0.72
IKBKB-228ENST00000523517 TMX4Q9H1E5 349 aaPredicted RBP19.52■□□□□ 0.72
IKBKB-228ENST00000523517 A0A0A6YYK5 440 aaPredicted RBP19.51■□□□□ 0.71
IKBKB-228ENST00000523517 SFI1A8K8P3 1242 aa19.51■□□□□ 0.71
IKBKB-228ENST00000523517 DDX3XO00571 662 aaKnown RBP eCLIP19.51■□□□□ 0.71
IKBKB-228ENST00000523517 BMP3P12645 472 aa19.51■□□□□ 0.71
IKBKB-228ENST00000523517 SLFN11Q7Z7L1 901 aa19.51■□□□□ 0.71
IKBKB-228ENST00000523517 METTL13Q8N6R0 699 aa19.51■□□□□ 0.71
IKBKB-228ENST00000523517 LMBR1Q8WVP7 490 aa19.51■□□□□ 0.71
IKBKB-228ENST00000523517 CALR3Q96L12 384 aaKnown RBP19.51■□□□□ 0.71
IKBKB-228ENST00000523517 RABEP2Q9H5N1 569 aa19.51■□□□□ 0.71
IKBKB-228ENST00000523517 INTUQ9ULD6 942 aa19.51■□□□□ 0.71
IKBKB-228ENST00000523517 MYH4Q9Y623 1939 aa19.51■□□□□ 0.71
IKBKB-228ENST00000523517 ATAD5Q96QE3 1844 aa19.51■□□□□ 0.71
IKBKB-228ENST00000523517 PGRMC1O00264 195 aaKnown RBP19.51■□□□□ 0.71
IKBKB-228ENST00000523517 FERP16591 822 aa19.51■□□□□ 0.71
IKBKB-228ENST00000523517 PDCLQ13371 301 aa19.51■□□□□ 0.71
IKBKB-228ENST00000523517 PTPROQ16827 1216 aa19.51■□□□□ 0.71
IKBKB-228ENST00000523517 BTNL9Q6UXG8 535 aa19.51■□□□□ 0.71
IKBKB-228ENST00000523517 KDM7AQ6ZMT4 941 aa19.51■□□□□ 0.71
IKBKB-228ENST00000523517 EFCAB13Q8IY85 973 aa19.51■□□□□ 0.71
IKBKB-228ENST00000523517 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.51■□□□□ 0.711e-7■■■□□ 15.9
IKBKB-228ENST00000523517 SPATA31A6Q5VVP1 1343 aa19.51■□□□□ 0.71
IKBKB-228ENST00000523517 EIF3DO15371 548 aaKnown RBP eCLIP19.5■□□□□ 0.71
IKBKB-228ENST00000523517 POLD1P28340 1107 aa19.5■□□□□ 0.71
IKBKB-228ENST00000523517 CUL1Q13616 776 aa19.5■□□□□ 0.71
IKBKB-228ENST00000523517 CTTNQ14247 550 aaKnown RBP19.5■□□□□ 0.71
IKBKB-228ENST00000523517 EMC10Q5UCC4 262 aa19.5■□□□□ 0.71
IKBKB-228ENST00000523517 PEX26Q7Z412 305 aa19.5■□□□□ 0.71
IKBKB-228ENST00000523517 C1orf131Q8NDD1 294 aaKnown RBP19.5■□□□□ 0.71
IKBKB-228ENST00000523517 PIGOQ8TEQ8 1089 aa19.5■□□□□ 0.71
IKBKB-228ENST00000523517 HSD17B14Q9BPX1 270 aa19.5■□□□□ 0.71
IKBKB-228ENST00000523517 SUCLA2Q9P2R7 463 aaPredicted RBP19.5■□□□□ 0.71
IKBKB-228ENST00000523517 STXBP5LQ9Y2K9 1186 aa19.5■□□□□ 0.71
IKBKB-228ENST00000523517 IGLV3-22A0A075B6J6 115 aa19.5■□□□□ 0.71
IKBKB-228ENST00000523517 TMCO5BA8MYB1 307 aa19.5■□□□□ 0.71
IKBKB-228ENST00000523517 PIK3CDO00329 1044 aa19.5■□□□□ 0.71
IKBKB-228ENST00000523517 NPM3O75607 178 aaKnown RBP19.5■□□□□ 0.71
IKBKB-228ENST00000523517 FAM13AO94988 1023 aa19.5■□□□□ 0.71
IKBKB-228ENST00000523517 ECHS1P30084 290 aa19.5■□□□□ 0.71
IKBKB-228ENST00000523517 STAT1P42224 750 aa19.5■□□□□ 0.71
IKBKB-228ENST00000523517 ATP1A2P50993 1020 aa19.5■□□□□ 0.71
IKBKB-228ENST00000523517 HDLBPQ00341 1268 aaKnown RBP19.5■□□□□ 0.71
IKBKB-228ENST00000523517 HLTFQ14527 1009 aaKnown RBP eCLIP19.5■□□□□ 0.71
IKBKB-228ENST00000523517 FAM186BQ8IYM0 893 aa19.5■□□□□ 0.71
IKBKB-228ENST00000523517 U2AF1L4Q8WU68 220 aaKnown RBP19.5■□□□□ 0.71
IKBKB-228ENST00000523517 PPM1EQ8WY54 764 aa19.5■□□□□ 0.71
IKBKB-228ENST00000523517 AP1M1Q9BXS5 423 aa19.5■□□□□ 0.71
IKBKB-228ENST00000523517 NOC2LQ9Y3T9 749 aaKnown RBP19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms