RNA–Protein interactions for RNA: ENST00000523469.5

CPNE3-206, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-206ENST00000523469 APOBEC2Q9Y235 224 aaKnown RBP8.27□□□□□ -1.09
CPNE3-206ENST00000523469 BAZ1BQ9UIG0 1483 aaKnown RBP8.26□□□□□ -1.09
CPNE3-206ENST00000523469 A0A1B0GTL3 188 aa8.26□□□□□ -1.09
CPNE3-206ENST00000523469 ANKRD62A6NC57 917 aa8.26□□□□□ -1.09
CPNE3-206ENST00000523469 NEMP1O14524 444 aa8.26□□□□□ -1.09
CPNE3-206ENST00000523469 TGM5O43548 720 aa8.26□□□□□ -1.09
CPNE3-206ENST00000523469 ECE1P42892 770 aa8.26□□□□□ -1.09
CPNE3-206ENST00000523469 SMAD3P84022 425 aaKnown RBP8.26□□□□□ -1.09
CPNE3-206ENST00000523469 LRRC32Q14392 662 aa8.26□□□□□ -1.09
CPNE3-206ENST00000523469 KRTAP19-4Q3LI73 84 aa8.26□□□□□ -1.09
CPNE3-206ENST00000523469 GPR158Q5T848 1215 aa8.26□□□□□ -1.09
CPNE3-206ENST00000523469 CYB5RLQ6IPT4 315 aa8.26□□□□□ -1.09
CPNE3-206ENST00000523469 ESRP1Q6NXG1 681 aaKnown RBP8.26□□□□□ -1.09
CPNE3-206ENST00000523469 TRMT10BQ6PF06 316 aaKnown RBP8.26□□□□□ -1.09
CPNE3-206ENST00000523469 WDR48Q8TAF3 677 aa8.26□□□□□ -1.09
CPNE3-206ENST00000523469 ZCCHC14Q8WYQ9 949 aaKnown RBP8.26□□□□□ -1.09
CPNE3-206ENST00000523469 FOXB1Q99853 325 aa8.26□□□□□ -1.09
CPNE3-206ENST00000523469 TACO1Q9BSH4 297 aaKnown RBP8.26□□□□□ -1.09
CPNE3-206ENST00000523469 AMNQ9BXJ7 453 aa8.26□□□□□ -1.09
CPNE3-206ENST00000523469 L2HGDHQ9H9P8 463 aa8.26□□□□□ -1.09
CPNE3-206ENST00000523469 EMC7Q9NPA0 242 aa8.26□□□□□ -1.09
CPNE3-206ENST00000523469 DDX3XO00571 662 aaKnown RBP eCLIP8.25□□□□□ -1.09
CPNE3-206ENST00000523469 EYA4O95677 639 aa8.25□□□□□ -1.09
CPNE3-206ENST00000523469 KNG1P01042 644 aa8.25□□□□□ -1.09
CPNE3-206ENST00000523469 ZSCAN22P10073 491 aaPredicted RBP8.25□□□□□ -1.09
CPNE3-206ENST00000523469 COL6A1P12109 1028 aa8.25□□□□□ -1.09
CPNE3-206ENST00000523469 CD40P25942 277 aa8.25□□□□□ -1.09
CPNE3-206ENST00000523469 PHC1P78364 1004 aa8.25□□□□□ -1.09
CPNE3-206ENST00000523469 ALDH6A1Q02252 535 aaKnown RBP8.25□□□□□ -1.09
CPNE3-206ENST00000523469 ATP13A4Q4VNC1 1196 aa8.25□□□□□ -1.09
CPNE3-206ENST00000523469 CXXC5Q7LFL8 322 aaKnown RBP8.25□□□□□ -1.09
CPNE3-206ENST00000523469 SIAH1Q8IUQ4 282 aa8.25□□□□□ -1.09
CPNE3-206ENST00000523469 ZMAT4Q9H898 229 aa8.25□□□□□ -1.09
CPNE3-206ENST00000523469 UBA6A0AVT1 1052 aaPredicted RBP8.24□□□□□ -1.09
CPNE3-206ENST00000523469 POU3F3P20264 500 aaPredicted RBP8.24□□□□□ -1.09
CPNE3-206ENST00000523469 STILQ15468 1287 aa8.24□□□□□ -1.09
CPNE3-206ENST00000523469 LRSAM1Q6UWE0 723 aa8.24□□□□□ -1.09
CPNE3-206ENST00000523469 ADAMTS17Q8TE56 1095 aa8.24□□□□□ -1.09
CPNE3-206ENST00000523469 OR10A5Q9H207 317 aa8.24□□□□□ -1.09
CPNE3-206ENST00000523469 LUC7LQ9NQ29 371 aaKnown RBP8.24□□□□□ -1.09
CPNE3-206ENST00000523469 FTSJ1Q9UET6 329 aa8.24□□□□□ -1.09
CPNE3-206ENST00000523469 SMARCA4P51532 1647 aa8.23□□□□□ -1.09
CPNE3-206ENST00000523469 H0Y858 1186 aa8.23□□□□□ -1.09
CPNE3-206ENST00000523469 LSP1P33241 339 aa8.23□□□□□ -1.09
CPNE3-206ENST00000523469 ID4P47928 161 aa8.23□□□□□ -1.09
CPNE3-206ENST00000523469 SLURP1P55000 103 aa8.23□□□□□ -1.09
CPNE3-206ENST00000523469 IL13RA1P78552 427 aa8.23□□□□□ -1.09
CPNE3-206ENST00000523469 ROM1Q03395 351 aa8.23□□□□□ -1.09
CPNE3-206ENST00000523469 STAT4Q14765 748 aa8.23□□□□□ -1.09
CPNE3-206ENST00000523469 TERF2Q15554 542 aa8.23□□□□□ -1.09
CPNE3-206ENST00000523469 DDB1Q16531 1140 aa8.23□□□□□ -1.09
CPNE3-206ENST00000523469 TTC38Q5R3I4 469 aa8.23□□□□□ -1.09
CPNE3-206ENST00000523469 FAM26FQ5R3K3 315 aa8.23□□□□□ -1.09
CPNE3-206ENST00000523469 ZNF610Q8N9Z0 462 aa8.23□□□□□ -1.09
CPNE3-206ENST00000523469 SLC5A5Q92911 643 aa8.23□□□□□ -1.09
CPNE3-206ENST00000523469 MAML3Q96JK9 1138 aa8.23□□□□□ -1.09
CPNE3-206ENST00000523469 MCM8Q9UJA3 840 aa8.23□□□□□ -1.09
CPNE3-206ENST00000523469 ULK1O75385 1050 aa8.22□□□□□ -1.09
CPNE3-206ENST00000523469 PRLP01236 227 aa8.22□□□□□ -1.09
CPNE3-206ENST00000523469 JAG1P78504 1218 aa8.22□□□□□ -1.09
CPNE3-206ENST00000523469 SLC6A3Q01959 620 aa8.22□□□□□ -1.09
CPNE3-206ENST00000523469 LCNL1Q6ZST4 164 aa8.22□□□□□ -1.09
CPNE3-206ENST00000523469 ZNF761Q86XN6 746 aaPredicted RBP8.22□□□□□ -1.09
CPNE3-206ENST00000523469 PHYKPLQ8IUZ5 450 aa8.22□□□□□ -1.09
CPNE3-206ENST00000523469 SP8Q8IXZ3 490 aa8.22□□□□□ -1.09
CPNE3-206ENST00000523469 C7orf31Q8N865 590 aa8.22□□□□□ -1.09
CPNE3-206ENST00000523469 ATL2Q8NHH9 583 aa8.22□□□□□ -1.09
CPNE3-206ENST00000523469 ZCRB1Q8TBF4 217 aaKnown RBP8.22□□□□□ -1.09
CPNE3-206ENST00000523469 RTF1Q92541 710 aaKnown RBP8.22□□□□□ -1.09
CPNE3-206ENST00000523469 YTHDC1Q96MU7 727 aaKnown RBP8.22□□□□□ -1.09
CPNE3-206ENST00000523469 SPATA25Q9BR10 227 aa8.22□□□□□ -1.09
CPNE3-206ENST00000523469 FAM126AQ9BYI3 521 aaPredicted RBP8.22□□□□□ -1.09
CPNE3-206ENST00000523469 TMEM168Q9H0V1 697 aa8.22□□□□□ -1.09
CPNE3-206ENST00000523469 USP36Q9P275 1121 aaKnown RBP8.22□□□□□ -1.09
CPNE3-206ENST00000523469 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.21□□□□□ -1.1
CPNE3-206ENST00000523469 C9orf118A6NHY6 69 aa8.21□□□□□ -1.1
CPNE3-206ENST00000523469 MAFO75444 373 aaPredicted RBP8.21□□□□□ -1.1
CPNE3-206ENST00000523469 KLHL18O94889 574 aa8.21□□□□□ -1.1
CPNE3-206ENST00000523469 CYP1A1P04798 512 aaPredicted RBP8.21□□□□□ -1.1
CPNE3-206ENST00000523469 APEX1P27695 318 aaKnown RBP8.21□□□□□ -1.1
CPNE3-206ENST00000523469 KCNC1P48547 511 aa8.21□□□□□ -1.1
CPNE3-206ENST00000523469 WDR72Q3MJ13 1102 aa8.21□□□□□ -1.1
CPNE3-206ENST00000523469 BROXQ5VW32 411 aa8.21□□□□□ -1.1
CPNE3-206ENST00000523469 KANK2Q63ZY3 851 aa8.21□□□□□ -1.1
CPNE3-206ENST00000523469 MCTP2Q6DN12 878 aa8.21□□□□□ -1.1
CPNE3-206ENST00000523469 SLFN12LQ6IEE8 588 aa8.21□□□□□ -1.1
CPNE3-206ENST00000523469 TIGD7Q6NT04 549 aaPredicted RBP8.21□□□□□ -1.1
CPNE3-206ENST00000523469 KRTAP19-1Q8IUB9 90 aa8.21□□□□□ -1.1
CPNE3-206ENST00000523469 TXNDC5Q8NBS9 432 aaKnown RBP8.21□□□□□ -1.1
CPNE3-206ENST00000523469 WDR66Q8TBY9 1149 aa8.21□□□□□ -1.1
CPNE3-206ENST00000523469 TUBGCP5Q96RT8 1024 aa8.21□□□□□ -1.1
CPNE3-206ENST00000523469 KRTAP4-12Q9BQ66 201 aa8.21□□□□□ -1.1
CPNE3-206ENST00000523469 FBXO10Q9UK96 956 aa8.21□□□□□ -1.1
CPNE3-206ENST00000523469 ATP8A1Q9Y2Q0 1164 aa8.21□□□□□ -1.1
CPNE3-206ENST00000523469 COL4A3BPQ9Y5P4 624 aa8.21□□□□□ -1.1
CPNE3-206ENST00000523469 TRIM13O60858 407 aa8.2□□□□□ -1.1
CPNE3-206ENST00000523469 SESN3P58005 492 aa8.2□□□□□ -1.1
CPNE3-206ENST00000523469 AMPD3Q01432 767 aa8.2□□□□□ -1.1
CPNE3-206ENST00000523469 PRAMEF9Q5VWM5 478 aa8.2□□□□□ -1.1
CPNE3-206ENST00000523469 DDX42Q86XP3 938 aaKnown RBP eCLIP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms