RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 XKR9Q5GH70 373 aa26.95■■□□□ 1.91
PVT1-212ENST00000521951 BHMT2Q9H2M3 363 aa26.95■■□□□ 1.91
PVT1-212ENST00000521951 GRIN2DO15399 1336 aa26.95■■□□□ 1.91
PVT1-212ENST00000521951 SMIM10L2AP0DMW4 78 aa26.95■■□□□ 1.9
PVT1-212ENST00000521951 SMIM10L2BP0DMW5 78 aa26.95■■□□□ 1.9
PVT1-212ENST00000521951 RARRES1P49788 294 aa26.95■■□□□ 1.9
PVT1-212ENST00000521951 MCM6Q14566 821 aa26.95■■□□□ 1.9
PVT1-212ENST00000521951 TARBP2Q15633 366 aaKnown RBP26.95■■□□□ 1.9
PVT1-212ENST00000521951 MTERF2Q49AM1 385 aa26.95■■□□□ 1.9
PVT1-212ENST00000521951 LARP4BQ92615 738 aaKnown RBP26.95■■□□□ 1.9
PVT1-212ENST00000521951 CEP170P1Q96L14 293 aa26.95■■□□□ 1.9
PVT1-212ENST00000521951 STARD7Q9NQZ5 370 aa26.95■■□□□ 1.9
PVT1-212ENST00000521951 SERTAD1Q9UHV2 236 aa26.95■■□□□ 1.9
PVT1-212ENST00000521951 ARID2Q68CP9 1835 aa26.94■■□□□ 1.9
PVT1-212ENST00000521951 ZBTB42B2RXF5 422 aa26.94■■□□□ 1.9
PVT1-212ENST00000521951 NR1I2O75469 434 aa26.94■■□□□ 1.9
PVT1-212ENST00000521951 PLA2G4BP0C869 781 aa26.94■■□□□ 1.9
PVT1-212ENST00000521951 PPFIA1Q13136 1202 aa26.94■■□□□ 1.9
PVT1-212ENST00000521951 ITGA7Q13683 1181 aa26.94■■□□□ 1.9
PVT1-212ENST00000521951 LONRF3Q496Y0 759 aa26.94■■□□□ 1.9
PVT1-212ENST00000521951 ZNF484Q5JVG2 852 aa26.94■■□□□ 1.9
PVT1-212ENST00000521951 DIS3LQ8TF46 1054 aaKnown RBP26.94■■□□□ 1.9
PVT1-212ENST00000521951 ABHD8Q96I13 439 aa26.94■■□□□ 1.9
PVT1-212ENST00000521951 CEP89Q96ST8 783 aa26.94■■□□□ 1.9
PVT1-212ENST00000521951 CUEDC2Q9H467 287 aa26.94■■□□□ 1.9
PVT1-212ENST00000521951 CYP26B1Q9NR63 512 aa26.94■■□□□ 1.9
PVT1-212ENST00000521951 HDAC6Q9UBN7 1215 aa26.94■■□□□ 1.9
PVT1-212ENST00000521951 ACTN4O43707 911 aaKnown RBP26.93■■□□□ 1.9
PVT1-212ENST00000521951 C7orf31Q8N865 590 aa26.93■■□□□ 1.9
PVT1-212ENST00000521951 SYT2Q8N9I0 419 aaPredicted RBP26.93■■□□□ 1.9
PVT1-212ENST00000521951 TRAPPC12Q8WVT3 735 aa26.93■■□□□ 1.9
PVT1-212ENST00000521951 CCDC43Q96MW1 224 aaKnown RBP26.93■■□□□ 1.9
PVT1-212ENST00000521951 SETD4Q9NVD3 440 aa26.93■■□□□ 1.9
PVT1-212ENST00000521951 USP25Q9UHP3 1055 aa26.93■■□□□ 1.9
PVT1-212ENST00000521951 ARHGEF35A5YM69 484 aa26.92■■□□□ 1.9
PVT1-212ENST00000521951 SSBP05455 408 aaKnown RBP eCLIP26.92■■□□□ 1.9
PVT1-212ENST00000521951 SLFN14P0C7P3 912 aa26.92■■□□□ 1.9
PVT1-212ENST00000521951 EN2P19622 333 aaPredicted RBP26.92■■□□□ 1.9
PVT1-212ENST00000521951 SLC12A3P55017 1021 aa26.92■■□□□ 1.9
PVT1-212ENST00000521951 DHX8Q14562 1220 aaKnown RBP26.92■■□□□ 1.9
PVT1-212ENST00000521951 GRIK4Q16099 956 aa26.92■■□□□ 1.9
PVT1-212ENST00000521951 SENP6Q9GZR1 1112 aaPredicted RBP26.92■■□□□ 1.9
PVT1-212ENST00000521951 COL1A2P08123 1366 aa26.92■■□□□ 1.9
PVT1-212ENST00000521951 TRIP12Q14669 1992 aaPredicted RBP26.92■■□□□ 1.9
PVT1-212ENST00000521951 COL6A1P12109 1028 aa26.91■■□□□ 1.9
PVT1-212ENST00000521951 IGBP1P78318 339 aa26.91■■□□□ 1.9
PVT1-212ENST00000521951 NFRKBQ6P4R8 1299 aa26.91■■□□□ 1.9
PVT1-212ENST00000521951 GPT2Q8TD30 523 aa26.91■■□□□ 1.9
PVT1-212ENST00000521951 NRCAMQ92823 1304 aa26.91■■□□□ 1.9
PVT1-212ENST00000521951 A0A0U1RQG5 324 aaPredicted RBP26.9■■□□□ 1.9
PVT1-212ENST00000521951 RRN3P2A6NIE6 340 aa26.9■■□□□ 1.9
PVT1-212ENST00000521951 HIC1Q14526 733 aa26.9■■□□□ 1.9
PVT1-212ENST00000521951 FAM47CQ5HY64 1035 aa26.9■■□□□ 1.9
PVT1-212ENST00000521951 KRBA2Q6ZNG9 492 aa26.9■■□□□ 1.9
PVT1-212ENST00000521951 SV2BQ7L1I2 683 aa26.9■■□□□ 1.9
PVT1-212ENST00000521951 SESTD1Q86VW0 696 aa26.9■■□□□ 1.9
PVT1-212ENST00000521951 CEP57L1Q8IYX8 460 aa26.9■■□□□ 1.9
PVT1-212ENST00000521951 SLC43A3Q8NBI5 491 aa26.9■■□□□ 1.9
PVT1-212ENST00000521951 LMBR1Q8WVP7 490 aa26.9■■□□□ 1.9
PVT1-212ENST00000521951 DACT1Q9NYF0 836 aa26.9■■□□□ 1.9
PVT1-212ENST00000521951 PPME1Q9Y570 386 aa26.9■■□□□ 1.9
PVT1-212ENST00000521951 HOXC8P31273 242 aa26.9■■□□□ 1.9
PVT1-212ENST00000521951 MARCH8Q5T0T0 291 aa26.9■■□□□ 1.9
PVT1-212ENST00000521951 PADI6Q6TGC4 694 aa26.9■■□□□ 1.9
PVT1-212ENST00000521951 STAMQ92783 540 aa26.9■■□□□ 1.9
PVT1-212ENST00000521951 PAWRQ96IZ0 340 aaKnown RBP26.9■■□□□ 1.9
PVT1-212ENST00000521951 KBTBD4Q9NVX7 518 aa26.9■■□□□ 1.9
PVT1-212ENST00000521951 GTF2IRD1Q9UHL9 959 aa26.9■■□□□ 1.9
PVT1-212ENST00000521951 C17orf102A2RUQ5 167 aa26.89■■□□□ 1.89
PVT1-212ENST00000521951 ADAM17P78536 824 aa26.89■■□□□ 1.89
PVT1-212ENST00000521951 NFKBIBQ15653 356 aa26.89■■□□□ 1.89
PVT1-212ENST00000521951 RINT1Q6NUQ1 792 aa26.89■■□□□ 1.89
PVT1-212ENST00000521951 CNNM3Q8NE01 707 aa26.89■■□□□ 1.89
PVT1-212ENST00000521951 TIGD1Q96MW7 591 aa26.89■■□□□ 1.89
PVT1-212ENST00000521951 MTRQ99707 1265 aa26.89■■□□□ 1.89
PVT1-212ENST00000521951 MAGEF1Q9HAY2 307 aa26.89■■□□□ 1.89
PVT1-212ENST00000521951 EVPLQ92817 2033 aa26.88■■□□□ 1.89
PVT1-212ENST00000521951 ARVCFO00192 962 aa26.88■■□□□ 1.89
PVT1-212ENST00000521951 PTMSP20962 102 aa26.88■■□□□ 1.89
PVT1-212ENST00000521951 KLRC1P26715 233 aa26.88■■□□□ 1.89
PVT1-212ENST00000521951 PTPN11Q06124 597 aaPredicted RBP26.88■■□□□ 1.89
PVT1-212ENST00000521951 TBC1D8BQ0IIM8 1120 aa26.88■■□□□ 1.89
PVT1-212ENST00000521951 GPBP1Q86WP2 473 aa26.88■■□□□ 1.89
PVT1-212ENST00000521951 ZBTB10Q96DT7 871 aa26.88■■□□□ 1.89
PVT1-212ENST00000521951 RUSC1Q9BVN2 902 aa26.88■■□□□ 1.89
PVT1-212ENST00000521951 DHX33Q9H6R0 707 aaKnown RBP26.88■■□□□ 1.89
PVT1-212ENST00000521951 USO1O60763 962 aaKnown RBP26.87■■□□□ 1.89
PVT1-212ENST00000521951 KINO60870 393 aaKnown RBP26.87■■□□□ 1.89
PVT1-212ENST00000521951 MAFO75444 373 aaPredicted RBP26.87■■□□□ 1.89
PVT1-212ENST00000521951 C22orf31O95567 290 aa26.87■■□□□ 1.89
PVT1-212ENST00000521951 GNAT1P11488 350 aa26.87■■□□□ 1.89
PVT1-212ENST00000521951 CYP11B2P19099 503 aa26.87■■□□□ 1.89
PVT1-212ENST00000521951 RFC5P40937 340 aa26.87■■□□□ 1.89
PVT1-212ENST00000521951 ZNF200P98182 395 aaPredicted RBP26.87■■□□□ 1.89
PVT1-212ENST00000521951 ARSHQ5FYA8 562 aa26.87■■□□□ 1.89
PVT1-212ENST00000521951 GDF6Q6KF10 455 aaPredicted RBP26.87■■□□□ 1.89
PVT1-212ENST00000521951 MTHFD1LQ6UB35 978 aa26.87■■□□□ 1.89
PVT1-212ENST00000521951 C1orf186Q6ZWK4 172 aa26.87■■□□□ 1.89
PVT1-212ENST00000521951 PAGE5Q96GU1 130 aa26.87■■□□□ 1.89
PVT1-212ENST00000521951 SEZ6LQ9BYH1 1024 aa26.87■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms