RNA–Protein interactions for RNA: ENST00000521683.5

CTNNA1-229, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-229ENST00000521683 DHX15O43143 795 aaKnown RBP10.11□□□□□ -0.79
CTNNA1-229ENST00000521683 ITGB1P05556 798 aa10.11□□□□□ -0.79
CTNNA1-229ENST00000521683 KLRC1P26715 233 aa10.11□□□□□ -0.79
CTNNA1-229ENST00000521683 SARSP49591 514 aaKnown RBP10.11□□□□□ -0.79
CTNNA1-229ENST00000521683 TMEM62Q0P6H9 643 aa10.11□□□□□ -0.79
CTNNA1-229ENST00000521683 SMAD4Q13485 552 aaKnown RBP10.11□□□□□ -0.79
CTNNA1-229ENST00000521683 CAMK1Q14012 370 aa10.11□□□□□ -0.79
CTNNA1-229ENST00000521683 ZNF746Q6NUN9 644 aaPredicted RBP10.11□□□□□ -0.79
CTNNA1-229ENST00000521683 MIS18BP1Q6P0N0 1132 aa10.11□□□□□ -0.79
CTNNA1-229ENST00000521683 PDXDC2PQ6P474 469 aa10.11□□□□□ -0.79
CTNNA1-229ENST00000521683 EP400NLQ6ZTU2 488 aa10.11□□□□□ -0.79
CTNNA1-229ENST00000521683 FBXL16Q8N461 479 aa10.11□□□□□ -0.79
CTNNA1-229ENST00000521683 POP1Q99575 1024 aaKnown RBP10.11□□□□□ -0.79
CTNNA1-229ENST00000521683 ZMYND12Q9H0C1 365 aa10.11□□□□□ -0.79
CTNNA1-229ENST00000521683 TMX1Q9H3N1 280 aa10.11□□□□□ -0.79
CTNNA1-229ENST00000521683 ERVK-5Q9HDB9 667 aa10.11□□□□□ -0.79
CTNNA1-229ENST00000521683 ZNF302Q9NR11 478 aa10.11□□□□□ -0.79
CTNNA1-229ENST00000521683 C1orf112Q9NSG2 853 aa10.11□□□□□ -0.79
CTNNA1-229ENST00000521683 TBC1D22BQ9NU19 505 aa10.11□□□□□ -0.79
CTNNA1-229ENST00000521683 LOXHD1Q8IVV2 1947 aa10.11□□□□□ -0.79
CTNNA1-229ENST00000521683 ZBTB42B2RXF5 422 aa10.1□□□□□ -0.79
CTNNA1-229ENST00000521683 DDX39AO00148 427 aaKnown RBP10.1□□□□□ -0.79
CTNNA1-229ENST00000521683 MBTPS2O43462 519 aa10.1□□□□□ -0.79
CTNNA1-229ENST00000521683 DCXO43602 365 aa10.1□□□□□ -0.79
CTNNA1-229ENST00000521683 TBX10O75333 385 aa10.1□□□□□ -0.79
CTNNA1-229ENST00000521683 RPS6KA5O75582 802 aa10.1□□□□□ -0.79
CTNNA1-229ENST00000521683 C22orf31O95567 290 aa10.1□□□□□ -0.79
CTNNA1-229ENST00000521683 ADD1P35611 737 aaKnown RBP10.1□□□□□ -0.79
CTNNA1-229ENST00000521683 FGD1P98174 961 aa10.1□□□□□ -0.79
CTNNA1-229ENST00000521683 ADAM15Q13444 863 aa10.1□□□□□ -0.79
CTNNA1-229ENST00000521683 JAKMIP3Q5VZ66 844 aa10.1□□□□□ -0.79
CTNNA1-229ENST00000521683 SMAP1Q8IYB5 467 aaPredicted RBP10.1□□□□□ -0.79
CTNNA1-229ENST00000521683 KIAA0319LQ8IZA0 1049 aa10.1□□□□□ -0.79
CTNNA1-229ENST00000521683 REXO1Q8N1G1 1221 aaKnown RBP10.1□□□□□ -0.79
CTNNA1-229ENST00000521683 SPPL3Q8TCT6 385 aa10.1□□□□□ -0.79
CTNNA1-229ENST00000521683 BBXQ8WY36 941 aaPredicted RBP10.1□□□□□ -0.79
CTNNA1-229ENST00000521683 ZNF577Q9BSK1 485 aa10.1□□□□□ -0.79
CTNNA1-229ENST00000521683 UPF3BQ9BZI7 483 aaKnown RBP10.1□□□□□ -0.79
CTNNA1-229ENST00000521683 C6orf50Q9HD87 102 aa10.1□□□□□ -0.79
CTNNA1-229ENST00000521683 ALG13Q9NP73 1137 aaKnown RBP10.1□□□□□ -0.79
CTNNA1-229ENST00000521683 TCEAL9Q9UHQ7 104 aa10.1□□□□□ -0.79
CTNNA1-229ENST00000521683 LRFN2Q9ULH4 789 aa10.1□□□□□ -0.79
CTNNA1-229ENST00000521683 MAFBQ9Y5Q3 323 aaPredicted RBP10.1□□□□□ -0.79
CTNNA1-229ENST00000521683 FSD2A1L4K1 749 aa10.09□□□□□ -0.79
CTNNA1-229ENST00000521683 DENND3A2RUS2 1198 aa10.09□□□□□ -0.79
CTNNA1-229ENST00000521683 C9IYK1 514 aa10.09□□□□□ -0.79
CTNNA1-229ENST00000521683 GPR182O15218 404 aa10.09□□□□□ -0.79
CTNNA1-229ENST00000521683 PRPF3O43395 683 aaKnown RBP10.09□□□□□ -0.79
CTNNA1-229ENST00000521683 MGEA5O60502 916 aa10.09□□□□□ -0.79
CTNNA1-229ENST00000521683 EYA4O95677 639 aa10.09□□□□□ -0.79
CTNNA1-229ENST00000521683 ATP4AP20648 1035 aa10.09□□□□□ -0.79
CTNNA1-229ENST00000521683 DNAJB1P25685 340 aa10.09□□□□□ -0.79
CTNNA1-229ENST00000521683 GNA11P29992 359 aa10.09□□□□□ -0.79
CTNNA1-229ENST00000521683 CIITAP33076 1130 aa10.09□□□□□ -0.79
CTNNA1-229ENST00000521683 CRYBB1P53674 252 aaPredicted RBP10.09□□□□□ -0.79
CTNNA1-229ENST00000521683 UBE3AQ05086 875 aa10.09□□□□□ -0.79
CTNNA1-229ENST00000521683 DLX2Q07687 328 aaPredicted RBP10.09□□□□□ -0.79
CTNNA1-229ENST00000521683 APOBRQ0VD83 1088 aa10.09□□□□□ -0.79
CTNNA1-229ENST00000521683 NFX1Q12986 1120 aaKnown RBP10.09□□□□□ -0.79
CTNNA1-229ENST00000521683 PKN1Q16512 942 aa10.09□□□□□ -0.79
CTNNA1-229ENST00000521683 TMEM266Q2M3C6 531 aa10.09□□□□□ -0.79
CTNNA1-229ENST00000521683 PAN2Q504Q3 1202 aaKnown RBP10.09□□□□□ -0.79
CTNNA1-229ENST00000521683 SWSAP1Q6NVH7 229 aa10.09□□□□□ -0.79
CTNNA1-229ENST00000521683 SLC24A5Q71RS6 500 aa10.09□□□□□ -0.79
CTNNA1-229ENST00000521683 ZNF710Q8N1W2 664 aa10.09□□□□□ -0.79
CTNNA1-229ENST00000521683 EFHBQ8N7U6 833 aa10.09□□□□□ -0.79
CTNNA1-229ENST00000521683 KLHL23Q8NBE8 558 aa10.09□□□□□ -0.79
CTNNA1-229ENST00000521683 CCDC148Q8NFR7 591 aa10.09□□□□□ -0.79
CTNNA1-229ENST00000521683 BICD2Q8TD16 824 aa10.09□□□□□ -0.79
CTNNA1-229ENST00000521683 POF1BQ8WVV4 589 aa10.09□□□□□ -0.79
CTNNA1-229ENST00000521683 TMEM40Q8WWA1 233 aa10.09□□□□□ -0.79
CTNNA1-229ENST00000521683 MSLNLQ96KJ4 702 aa10.09□□□□□ -0.79
CTNNA1-229ENST00000521683 FAM167AQ96KS9 214 aa10.09□□□□□ -0.79
CTNNA1-229ENST00000521683 AGXT2Q9BYV1 514 aa10.09□□□□□ -0.79
CTNNA1-229ENST00000521683 RGS18Q9NS28 235 aa10.09□□□□□ -0.79
CTNNA1-229ENST00000521683 CD207Q9UJ71 328 aa10.09□□□□□ -0.79
CTNNA1-229ENST00000521683 NAP1L2Q9ULW6 460 aaPredicted RBP10.09□□□□□ -0.79
CTNNA1-229ENST00000521683 CEP131Q9UPN4 1083 aa10.09□□□□□ -0.79
CTNNA1-229ENST00000521683 NOC2LQ9Y3T9 749 aaKnown RBP10.09□□□□□ -0.79
CTNNA1-229ENST00000521683 PCDHB7Q9Y5E2 793 aa10.09□□□□□ -0.79
CTNNA1-229ENST00000521683 EVPLQ92817 2033 aa10.09□□□□□ -0.79
CTNNA1-229ENST00000521683 FNDC1Q4ZHG4 1894 aaPredicted RBP10.08□□□□□ -0.8
CTNNA1-229ENST00000521683 MYH9P35579 1960 aaKnown RBP10.08□□□□□ -0.8
CTNNA1-229ENST00000521683 ZNF318Q5VUA4 2279 aa10.08□□□□□ -0.8
CTNNA1-229ENST00000521683 MAGEB2O15479 319 aa10.08□□□□□ -0.8
CTNNA1-229ENST00000521683 LINC01565O15544 149 aa10.08□□□□□ -0.8
CTNNA1-229ENST00000521683 PSAPP07602 524 aa10.08□□□□□ -0.8
CTNNA1-229ENST00000521683 HSPA4P34932 840 aa10.08□□□□□ -0.8
CTNNA1-229ENST00000521683 GTF2F1P35269 517 aaKnown RBP eCLIP10.08□□□□□ -0.8
CTNNA1-229ENST00000521683 IRS1P35568 1242 aa10.08□□□□□ -0.8
CTNNA1-229ENST00000521683 NDUFV1P49821 464 aa10.08□□□□□ -0.8
CTNNA1-229ENST00000521683 CSPP1Q1MSJ5 1256 aa10.08□□□□□ -0.8
CTNNA1-229ENST00000521683 KIZQ2M2Z5 673 aa10.08□□□□□ -0.8
CTNNA1-229ENST00000521683 BLOC1S2Q6QNY1 142 aa10.08□□□□□ -0.8
CTNNA1-229ENST00000521683 Q6ZUG5 572 aa10.08□□□□□ -0.8
CTNNA1-229ENST00000521683 FAM228AQ86W67 206 aa10.08□□□□□ -0.8
CTNNA1-229ENST00000521683 SKAP1Q86WV1 359 aa10.08□□□□□ -0.8
CTNNA1-229ENST00000521683 CKAP2LQ8IYA6 745 aa10.08□□□□□ -0.8
CTNNA1-229ENST00000521683 LINC01465Q8N7H1 131 aa10.08□□□□□ -0.8
CTNNA1-229ENST00000521683 SMRP1Q8NCR6 262 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms