RNA–Protein interactions for RNA: ENST00000521678.1

IGHV3-60-201, Transcript of immunoglobulin heavy variable 3-60 (pseudogene), humanhuman

BASIC

Gene IGHV3-60, Length 354 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-60-201ENST00000521678 FGF18O76093 207 aa13.15□□□□□ -0.3
IGHV3-60-201ENST00000521678 ARP10275 920 aa13.15□□□□□ -0.3
IGHV3-60-201ENST00000521678 KLRC1P26715 233 aa13.15□□□□□ -0.3
IGHV3-60-201ENST00000521678 RBM10P98175 930 aaKnown RBP13.15□□□□□ -0.3
IGHV3-60-201ENST00000521678 ITGB3BPQ13352 177 aaPredicted RBP13.15□□□□□ -0.3
IGHV3-60-201ENST00000521678 COL9A3Q14050 684 aaPredicted RBP13.15□□□□□ -0.3
IGHV3-60-201ENST00000521678 TMEM266Q2M3C6 531 aa13.15□□□□□ -0.3
IGHV3-60-201ENST00000521678 CEP55Q53EZ4 464 aa13.15□□□□□ -0.3
IGHV3-60-201ENST00000521678 FAM102BQ5T8I3 360 aa13.15□□□□□ -0.3
IGHV3-60-201ENST00000521678 ABHD15Q6UXT9 468 aa13.15□□□□□ -0.3
IGHV3-60-201ENST00000521678 SUGP1Q8IWZ8 645 aaKnown RBP13.15□□□□□ -0.3
IGHV3-60-201ENST00000521678 FANCBQ8NB91 859 aa13.15□□□□□ -0.3
IGHV3-60-201ENST00000521678 MICAL1Q8TDZ2 1067 aa13.15□□□□□ -0.3
IGHV3-60-201ENST00000521678 SNX27Q96L92 541 aa13.15□□□□□ -0.3
IGHV3-60-201ENST00000521678 ADAM2Q99965 735 aa13.15□□□□□ -0.3
IGHV3-60-201ENST00000521678 TLR9Q9NR96 1032 aa13.15□□□□□ -0.3
IGHV3-60-201ENST00000521678 AAASQ9NRG9 546 aa13.15□□□□□ -0.3
IGHV3-60-201ENST00000521678 C1orf112Q9NSG2 853 aa13.15□□□□□ -0.3
IGHV3-60-201ENST00000521678 TYW1Q9NV66 732 aaKnown RBP13.15□□□□□ -0.3
IGHV3-60-201ENST00000521678 RNF216Q9NWF9 866 aaPredicted RBP13.15□□□□□ -0.3
IGHV3-60-201ENST00000521678 TRPC6Q9Y210 931 aa13.15□□□□□ -0.3
IGHV3-60-201ENST00000521678 LZTS1Q9Y250 596 aa13.15□□□□□ -0.3
IGHV3-60-201ENST00000521678 hCG_1642624A0A1W2PR95 340 aa13.14□□□□□ -0.31
IGHV3-60-201ENST00000521678 ZBTB42B2RXF5 422 aa13.14□□□□□ -0.31
IGHV3-60-201ENST00000521678 HBP1O60381 514 aa13.14□□□□□ -0.31
IGHV3-60-201ENST00000521678 CALM1P0DP23 149 aa13.14□□□□□ -0.31
IGHV3-60-201ENST00000521678 CALM2P0DP24 149 aa13.14□□□□□ -0.31
IGHV3-60-201ENST00000521678 CALM3P0DP25 149 aa13.14□□□□□ -0.31
IGHV3-60-201ENST00000521678 AVPR2P30518 371 aa13.14□□□□□ -0.31
IGHV3-60-201ENST00000521678 MCM5P33992 734 aa13.14□□□□□ -0.31
IGHV3-60-201ENST00000521678 PLCB3Q01970 1234 aa13.14□□□□□ -0.31
IGHV3-60-201ENST00000521678 NFX1Q12986 1120 aaKnown RBP13.14□□□□□ -0.31
IGHV3-60-201ENST00000521678 DSC3Q14574 896 aa13.14□□□□□ -0.31
IGHV3-60-201ENST00000521678 SYCE2Q6PIF2 218 aa13.14□□□□□ -0.31
IGHV3-60-201ENST00000521678 CASC1Q6TDU7 716 aa13.14□□□□□ -0.31
IGHV3-60-201ENST00000521678 TMTC3Q6ZXV5 915 aa13.14□□□□□ -0.31
IGHV3-60-201ENST00000521678 TMEM40Q8WWA1 233 aa13.14□□□□□ -0.31
IGHV3-60-201ENST00000521678 RPGRIP1Q96KN7 1286 aa13.14□□□□□ -0.31
IGHV3-60-201ENST00000521678 SDF4Q9BRK5 362 aa13.14□□□□□ -0.31
IGHV3-60-201ENST00000521678 CWH43Q9H720 699 aa13.14□□□□□ -0.31
IGHV3-60-201ENST00000521678 ELAC1Q9H777 363 aaKnown RBP13.14□□□□□ -0.31
IGHV3-60-201ENST00000521678 AGO4Q9HCK5 861 aaKnown RBP13.14□□□□□ -0.31
IGHV3-60-201ENST00000521678 ST3GAL5Q9UNP4 418 aa13.14□□□□□ -0.31
IGHV3-60-201ENST00000521678 RBM8AQ9Y5S9 174 aaKnown RBP13.14□□□□□ -0.31
IGHV3-60-201ENST00000521678 VPS13AQ96RL7 3174 aa13.14□□□□□ -0.31
IGHV3-60-201ENST00000521678 TBKBP1A7MCY6 615 aa13.13□□□□□ -0.31
IGHV3-60-201ENST00000521678 GPR182O15218 404 aa13.13□□□□□ -0.31
IGHV3-60-201ENST00000521678 DHX15O43143 795 aaKnown RBP13.13□□□□□ -0.31
IGHV3-60-201ENST00000521678 RPS6KA5O75582 802 aa13.13□□□□□ -0.31
IGHV3-60-201ENST00000521678 CCNE2O96020 404 aa13.13□□□□□ -0.31
IGHV3-60-201ENST00000521678 FOSP01100 380 aaPredicted RBP13.13□□□□□ -0.31
IGHV3-60-201ENST00000521678 NUBP1P53384 320 aa13.13□□□□□ -0.31
IGHV3-60-201ENST00000521678 VCPP55072 806 aaKnown RBP13.13□□□□□ -0.31
IGHV3-60-201ENST00000521678 PTPN21Q16825 1174 aa13.13□□□□□ -0.31
IGHV3-60-201ENST00000521678 ZNF484Q5JVG2 852 aa13.13□□□□□ -0.31
IGHV3-60-201ENST00000521678 ODR4Q5SWX8 454 aa13.13□□□□□ -0.31
IGHV3-60-201ENST00000521678 TYW1BQ6NUM6 668 aa13.13□□□□□ -0.31
IGHV3-60-201ENST00000521678 ANKRD54Q6NXT1 300 aa13.13□□□□□ -0.31
IGHV3-60-201ENST00000521678 NIPA1Q7RTP0 329 aa13.13□□□□□ -0.31
IGHV3-60-201ENST00000521678 SGMS1Q86VZ5 419 aa13.13□□□□□ -0.31
IGHV3-60-201ENST00000521678 COLGALT1Q8NBJ5 622 aa13.13□□□□□ -0.31
IGHV3-60-201ENST00000521678 NEK1Q96PY6 1258 aa13.13□□□□□ -0.31
IGHV3-60-201ENST00000521678 IRF2BPLQ9H1B7 796 aa13.13□□□□□ -0.31
IGHV3-60-201ENST00000521678 RIC8AQ9NPQ8 531 aa13.13□□□□□ -0.31
IGHV3-60-201ENST00000521678 TMEM161AQ9NX61 479 aa13.13□□□□□ -0.31
IGHV3-60-201ENST00000521678 TMEM260Q9NX78 707 aa13.13□□□□□ -0.31
IGHV3-60-201ENST00000521678 CCDC69A6NI79 296 aa13.12□□□□□ -0.31
IGHV3-60-201ENST00000521678 HOXB8P17481 243 aaPredicted RBP13.12□□□□□ -0.31
IGHV3-60-201ENST00000521678 RXRAP19793 462 aa13.12□□□□□ -0.31
IGHV3-60-201ENST00000521678 ATP4AP20648 1035 aa13.12□□□□□ -0.31
IGHV3-60-201ENST00000521678 CRYBB1P53674 252 aaPredicted RBP13.12□□□□□ -0.31
IGHV3-60-201ENST00000521678 FUT2Q10981 343 aa13.12□□□□□ -0.31
IGHV3-60-201ENST00000521678 NFXL1Q6ZNB6 911 aa13.12□□□□□ -0.31
IGHV3-60-201ENST00000521678 LRRC55Q6ZSA7 311 aa13.12□□□□□ -0.31
IGHV3-60-201ENST00000521678 CCDC82Q8N4S0 544 aa13.12□□□□□ -0.31
IGHV3-60-201ENST00000521678 MRPS27Q92552 414 aaKnown RBP13.12□□□□□ -0.31
IGHV3-60-201ENST00000521678 NGRNQ9NPE2 291 aaKnown RBP13.12□□□□□ -0.31
IGHV3-60-201ENST00000521678 HCSTQ9UBK5 93 aa13.12□□□□□ -0.31
IGHV3-60-201ENST00000521678 MYO15AQ9UKN7 3530 aa13.11□□□□□ -0.31
IGHV3-60-201ENST00000521678 COL1A2P08123 1366 aa13.11□□□□□ -0.31
IGHV3-60-201ENST00000521678 DENND3A2RUS2 1198 aa13.11□□□□□ -0.31
IGHV3-60-201ENST00000521678 PROB1E7EW31 1015 aa13.11□□□□□ -0.31
IGHV3-60-201ENST00000521678 GPR32O75388 356 aa13.11□□□□□ -0.31
IGHV3-60-201ENST00000521678 LAG3P18627 525 aa13.11□□□□□ -0.31
IGHV3-60-201ENST00000521678 SREBF1P36956 1147 aa13.11□□□□□ -0.31
IGHV3-60-201ENST00000521678 WWC2Q6AWC2 1192 aa13.11□□□□□ -0.31
IGHV3-60-201ENST00000521678 HEATR3Q7Z4Q2 680 aa13.11□□□□□ -0.31
IGHV3-60-201ENST00000521678 FAM228AQ86W67 206 aa13.11□□□□□ -0.31
IGHV3-60-201ENST00000521678 CRYGNQ8WXF5 182 aa13.11□□□□□ -0.31
IGHV3-60-201ENST00000521678 RIPOR3Q96MK2 946 aa13.11□□□□□ -0.31
IGHV3-60-201ENST00000521678 CASD1Q96PB1 797 aa13.11□□□□□ -0.31
IGHV3-60-201ENST00000521678 TMEM117Q9H0C3 514 aa13.11□□□□□ -0.31
IGHV3-60-201ENST00000521678 ATP6V0A4Q9HBG4 840 aa13.11□□□□□ -0.31
IGHV3-60-201ENST00000521678 RNF19AQ9NV58 838 aa13.11□□□□□ -0.31
IGHV3-60-201ENST00000521678 PUF60Q9UHX1 559 aaKnown RBP13.11□□□□□ -0.31
IGHV3-60-201ENST00000521678 SLC12A7Q9Y666 1083 aa13.11□□□□□ -0.31
IGHV3-60-201ENST00000521678 ZNF292O60281 2723 aa13.1□□□□□ -0.31
IGHV3-60-201ENST00000521678 HIDE1A8MVS5 230 aa13.1□□□□□ -0.31
IGHV3-60-201ENST00000521678 C22orf31O95567 290 aa13.1□□□□□ -0.31
IGHV3-60-201ENST00000521678 CLK2P49760 499 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms