RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 TIFAQ96CG3 184 aa4.56□□□□□ -1.68
HMGN1P28-201ENST00000521340 HSPBAP1Q96EW2 488 aa4.56□□□□□ -1.68
HMGN1P28-201ENST00000521340 ACAP3Q96P50 834 aa4.56□□□□□ -1.68
HMGN1P28-201ENST00000521340 KRTAP4-9Q9BYQ8 210 aa4.56□□□□□ -1.68
HMGN1P28-201ENST00000521340 C19orf44Q9H6X5 657 aa4.56□□□□□ -1.68
HMGN1P28-201ENST00000521340 DDX21Q9NR30 783 aaKnown RBP eCLIP4.56□□□□□ -1.68
HMGN1P28-201ENST00000521340 MKS1Q9NXB0 559 aa4.56□□□□□ -1.68
HMGN1P28-201ENST00000521340 SERPINB13Q9UIV8 391 aa4.56□□□□□ -1.68
HMGN1P28-201ENST00000521340 PPP2R3BQ9Y5P8 575 aa4.56□□□□□ -1.68
HMGN1P28-201ENST00000521340 FITM1A5D6W6 292 aa4.55□□□□□ -1.68
HMGN1P28-201ENST00000521340 PLEKHD1A6NEE1 506 aa4.55□□□□□ -1.68
HMGN1P28-201ENST00000521340 ZNF503-AS2A6NEH8 195 aa4.55□□□□□ -1.68
HMGN1P28-201ENST00000521340 DBX1A6NMT0 343 aa4.55□□□□□ -1.68
HMGN1P28-201ENST00000521340 A6NNZ2 444 aa4.55□□□□□ -1.68
HMGN1P28-201ENST00000521340 NFIBO00712 420 aa4.55□□□□□ -1.68
HMGN1P28-201ENST00000521340 FOXP2O15409 715 aa4.55□□□□□ -1.68
HMGN1P28-201ENST00000521340 SNUPNO95149 360 aaKnown RBP4.55□□□□□ -1.68
HMGN1P28-201ENST00000521340 LRG1P02750 347 aa4.55□□□□□ -1.68
HMGN1P28-201ENST00000521340 MMEP08473 750 aa4.55□□□□□ -1.68
HMGN1P28-201ENST00000521340 FAHP16930 419 aa4.55□□□□□ -1.68
HMGN1P28-201ENST00000521340 AOAHP28039 575 aa4.55□□□□□ -1.68
HMGN1P28-201ENST00000521340 FXR1P51114 621 aaKnown RBP eCLIP4.55□□□□□ -1.68
HMGN1P28-201ENST00000521340 GALK1P51570 392 aa4.55□□□□□ -1.68
HMGN1P28-201ENST00000521340 CYP4F8P98187 520 aa4.55□□□□□ -1.68
HMGN1P28-201ENST00000521340 SRSF2Q01130 221 aaKnown RBP4.55□□□□□ -1.68
HMGN1P28-201ENST00000521340 TRIM25Q14258 630 aaKnown RBP4.55□□□□□ -1.68
HMGN1P28-201ENST00000521340 TMEM132BQ14DG7 1078 aa4.55□□□□□ -1.68
HMGN1P28-201ENST00000521340 CT83Q5H943 113 aa4.55□□□□□ -1.68
HMGN1P28-201ENST00000521340 ATAT1Q5SQI0 421 aa4.55□□□□□ -1.68
HMGN1P28-201ENST00000521340 CHST15Q7LFX5 561 aaPredicted RBP4.55□□□□□ -1.68
HMGN1P28-201ENST00000521340 SPPL2CQ8IUH8 684 aa4.55□□□□□ -1.68
HMGN1P28-201ENST00000521340 FBXO41Q8TF61 875 aa4.55□□□□□ -1.68
HMGN1P28-201ENST00000521340 EAF2Q96CJ1 260 aaPredicted RBP4.55□□□□□ -1.68
HMGN1P28-201ENST00000521340 AMNQ9BXJ7 453 aa4.55□□□□□ -1.68
HMGN1P28-201ENST00000521340 RXFP1Q9HBX9 757 aa4.55□□□□□ -1.68
HMGN1P28-201ENST00000521340 MSRAQ9UJ68 235 aa4.55□□□□□ -1.68
HMGN1P28-201ENST00000521340 PLA2G2DQ9UNK4 145 aa4.55□□□□□ -1.68
HMGN1P28-201ENST00000521340 CTNND2Q9UQB3 1225 aa4.55□□□□□ -1.68
HMGN1P28-201ENST00000521340 HCFC2Q9Y5Z7 792 aa4.55□□□□□ -1.68
HMGN1P28-201ENST00000521340 TAF6LQ9Y6J9 622 aa4.55□□□□□ -1.68
HMGN1P28-201ENST00000521340 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.54□□□□□ -1.68
HMGN1P28-201ENST00000521340 HIP1RO75146 1068 aa4.54□□□□□ -1.68
HMGN1P28-201ENST00000521340 POU2F2P09086 479 aa4.54□□□□□ -1.68
HMGN1P28-201ENST00000521340 FBLN1P23142 703 aa4.54□□□□□ -1.68
HMGN1P28-201ENST00000521340 EDNRBP24530 442 aa4.54□□□□□ -1.68
HMGN1P28-201ENST00000521340 AKAP5P24588 427 aa4.54□□□□□ -1.68
HMGN1P28-201ENST00000521340 USP14P54578 494 aa4.54□□□□□ -1.68
HMGN1P28-201ENST00000521340 PURAQ00577 322 aaKnown RBP4.54□□□□□ -1.68
HMGN1P28-201ENST00000521340 ADCY1Q08828 1119 aa4.54□□□□□ -1.68
HMGN1P28-201ENST00000521340 DBPQ10586 325 aaPredicted RBP4.54□□□□□ -1.68
HMGN1P28-201ENST00000521340 SNX17Q15036 470 aa4.54□□□□□ -1.68
HMGN1P28-201ENST00000521340 SLC14A2Q15849 920 aa4.54□□□□□ -1.68
HMGN1P28-201ENST00000521340 RGL3Q3MIN7 710 aa4.54□□□□□ -1.68
HMGN1P28-201ENST00000521340 PAN2Q504Q3 1202 aaKnown RBP4.54□□□□□ -1.68
HMGN1P28-201ENST00000521340 FYB2Q5VWT5 728 aa4.54□□□□□ -1.68
HMGN1P28-201ENST00000521340 SPOCD1Q6ZMY3 1216 aa4.54□□□□□ -1.68
HMGN1P28-201ENST00000521340 MIB1Q86YT6 1006 aa4.54□□□□□ -1.68
HMGN1P28-201ENST00000521340 CCAR1Q8IX12 1150 aaKnown RBP4.54□□□□□ -1.68
HMGN1P28-201ENST00000521340 FAM43AQ8N2R8 423 aa4.54□□□□□ -1.68
HMGN1P28-201ENST00000521340 TSPEARQ8WU66 669 aa4.54□□□□□ -1.68
HMGN1P28-201ENST00000521340 GBP4Q96PP9 640 aa4.54□□□□□ -1.68
HMGN1P28-201ENST00000521340 TAAR9Q96RI9 348 aa4.54□□□□□ -1.68
HMGN1P28-201ENST00000521340 RPS6KC1Q96S38 1066 aa4.54□□□□□ -1.68
HMGN1P28-201ENST00000521340 SARGQ9BW04 601 aa4.54□□□□□ -1.68
HMGN1P28-201ENST00000521340 ANO3Q9BYT9 981 aa4.54□□□□□ -1.68
HMGN1P28-201ENST00000521340 PCIF1Q9H4Z3 704 aa4.54□□□□□ -1.68
HMGN1P28-201ENST00000521340 DNM3Q9UQ16 869 aa4.54□□□□□ -1.68
HMGN1P28-201ENST00000521340 ASB1Q9Y576 335 aa4.54□□□□□ -1.68
HMGN1P28-201ENST00000521340 PCDHB4Q9Y5E5 795 aa4.54□□□□□ -1.68
HMGN1P28-201ENST00000521340 GPR45Q9Y5Y3 372 aa4.54□□□□□ -1.68
HMGN1P28-201ENST00000521340 GOLGA6CA6NDK9 693 aa4.53□□□□□ -1.68
HMGN1P28-201ENST00000521340 GOLGA6BA6NDN3 693 aa4.53□□□□□ -1.68
HMGN1P28-201ENST00000521340 PRLP01236 227 aa4.53□□□□□ -1.68
HMGN1P28-201ENST00000521340 CYBBP04839 570 aa4.53□□□□□ -1.68
HMGN1P28-201ENST00000521340 MYL1P05976 194 aa4.53□□□□□ -1.68
HMGN1P28-201ENST00000521340 PFKMP08237 780 aa4.53□□□□□ -1.68
HMGN1P28-201ENST00000521340 CELA3BP08861 270 aa4.53□□□□□ -1.68
HMGN1P28-201ENST00000521340 CLEC2LP0C7M8 214 aa4.53□□□□□ -1.68
HMGN1P28-201ENST00000521340 GOLGA6DP0CG33 693 aa4.53□□□□□ -1.68
HMGN1P28-201ENST00000521340 ADKP55263 362 aaKnown RBP4.53□□□□□ -1.68
HMGN1P28-201ENST00000521340 MRPS9P82933 396 aaKnown RBP4.53□□□□□ -1.68
HMGN1P28-201ENST00000521340 GRIN1Q05586 938 aa4.53□□□□□ -1.68
HMGN1P28-201ENST00000521340 CHRNA2Q15822 529 aa4.53□□□□□ -1.68
HMGN1P28-201ENST00000521340 MINDY4Q4G0A6 757 aa4.53□□□□□ -1.68
HMGN1P28-201ENST00000521340 FBLN7Q53RD9 439 aa4.53□□□□□ -1.68
HMGN1P28-201ENST00000521340 TOR2AQ5JU69 321 aa4.53□□□□□ -1.68
HMGN1P28-201ENST00000521340 SYCP2LQ5T4T6 812 aa4.53□□□□□ -1.68
HMGN1P28-201ENST00000521340 ZSWIM9Q86XI8 627 aa4.53□□□□□ -1.68
HMGN1P28-201ENST00000521340 NME9Q86XW9 330 aa4.53□□□□□ -1.68
HMGN1P28-201ENST00000521340 DCP2Q8IU60 420 aaKnown RBP4.53□□□□□ -1.68
HMGN1P28-201ENST00000521340 TRIM48Q8IWZ4 208 aa4.53□□□□□ -1.68
HMGN1P28-201ENST00000521340 SMC5Q8IY18 1101 aa4.53□□□□□ -1.68
HMGN1P28-201ENST00000521340 LILRA2Q8N149 483 aa4.53□□□□□ -1.68
HMGN1P28-201ENST00000521340 OXR1Q8N573 874 aa4.53□□□□□ -1.68
HMGN1P28-201ENST00000521340 SSH1Q8WYL5 1049 aa4.53□□□□□ -1.68
HMGN1P28-201ENST00000521340 HPS3Q969F9 1004 aa4.53□□□□□ -1.68
HMGN1P28-201ENST00000521340 CLIP3Q96DZ5 547 aa4.53□□□□□ -1.68
HMGN1P28-201ENST00000521340 TSPAN17Q96FV3 270 aa4.53□□□□□ -1.68
HMGN1P28-201ENST00000521340 SLC2A13Q96QE2 648 aa4.53□□□□□ -1.68
HMGN1P28-201ENST00000521340 MYL10Q9BUA6 226 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms