RNA–Protein interactions for RNA: ENST00000520868.5

PABPC1-216, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-216ENST00000520868 SOS1Q07889 1333 aaPredicted RBP7.79□□□□□ -1.16
PABPC1-216ENST00000520868 COL5A3P25940 1745 aaPredicted RBP7.79□□□□□ -1.16
PABPC1-216ENST00000520868 B2RBV5 119 aa7.79□□□□□ -1.16
PABPC1-216ENST00000520868 INHBBP09529 407 aa7.79□□□□□ -1.16
PABPC1-216ENST00000520868 GLI4P10075 376 aa7.79□□□□□ -1.16
PABPC1-216ENST00000520868 PLS3P13797 630 aa7.79□□□□□ -1.16
PABPC1-216ENST00000520868 PRELPP51888 382 aa7.79□□□□□ -1.16
PABPC1-216ENST00000520868 CNGB1Q14028 1251 aaPredicted RBP7.79□□□□□ -1.16
PABPC1-216ENST00000520868 IQCEQ6IPM2 695 aa7.79□□□□□ -1.16
PABPC1-216ENST00000520868 EEPD1Q7L9B9 569 aa7.79□□□□□ -1.16
PABPC1-216ENST00000520868 C2CD5Q86YS7 1000 aa7.79□□□□□ -1.16
PABPC1-216ENST00000520868 IGDCC3Q8IVU1 814 aa7.79□□□□□ -1.16
PABPC1-216ENST00000520868 TTLL6Q8N841 843 aa7.79□□□□□ -1.16
PABPC1-216ENST00000520868 NETO2Q8NC67 525 aa7.79□□□□□ -1.16
PABPC1-216ENST00000520868 SMC1BQ8NDV3 1235 aa7.79□□□□□ -1.16
PABPC1-216ENST00000520868 CCDC140Q96MF4 163 aa7.79□□□□□ -1.16
PABPC1-216ENST00000520868 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.79□□□□□ -1.164e-23■■■■■ 34
PABPC1-216ENST00000520868 CLEC1BQ9P126 229 aa7.79□□□□□ -1.16
PABPC1-216ENST00000520868 RWDD3Q9Y3V2 267 aa7.79□□□□□ -1.16
PABPC1-216ENST00000520868 H0YIN7 160 aa7.78□□□□□ -1.16
PABPC1-216ENST00000520868 HOXC12P31275 282 aa7.78□□□□□ -1.16
PABPC1-216ENST00000520868 ZNF200P98182 395 aaPredicted RBP7.78□□□□□ -1.16
PABPC1-216ENST00000520868 ZNF227Q86WZ6 799 aa7.78□□□□□ -1.16
PABPC1-216ENST00000520868 TMEFF1Q8IYR6 380 aa7.78□□□□□ -1.16
PABPC1-216ENST00000520868 JMYQ8N9B5 988 aa7.78□□□□□ -1.16
PABPC1-216ENST00000520868 USP33Q8TEY7 942 aa7.78□□□□□ -1.16
PABPC1-216ENST00000520868 ZNF622Q969S3 477 aaKnown RBP eCLIP7.78□□□□□ -1.16
PABPC1-216ENST00000520868 GPRC5CQ9NQ84 441 aa7.78□□□□□ -1.16
PABPC1-216ENST00000520868 GULP1Q9UBP9 304 aa7.78□□□□□ -1.16
PABPC1-216ENST00000520868 COL15A1P39059 1388 aa7.78□□□□□ -1.16
PABPC1-216ENST00000520868 ZNF831Q5JPB2 1677 aa7.78□□□□□ -1.16
PABPC1-216ENST00000520868 CLSPNQ9HAW4 1339 aa7.78□□□□□ -1.16
PABPC1-216ENST00000520868 IRS2Q9Y4H2 1338 aa7.78□□□□□ -1.16
PABPC1-216ENST00000520868 ZC3H12DA2A288 527 aaKnown RBP7.77□□□□□ -1.17
PABPC1-216ENST00000520868 C7orf72A4D263 438 aa7.77□□□□□ -1.17
PABPC1-216ENST00000520868 GLTPD2A6NH11 291 aa7.77□□□□□ -1.17
PABPC1-216ENST00000520868 AGRPO00253 132 aa7.77□□□□□ -1.17
PABPC1-216ENST00000520868 BUB1BO60566 1050 aaPredicted RBP7.77□□□□□ -1.17
PABPC1-216ENST00000520868 DIAPH1O60610 1272 aaKnown RBP7.77□□□□□ -1.17
PABPC1-216ENST00000520868 STARD3NLO95772 234 aa7.77□□□□□ -1.17
PABPC1-216ENST00000520868 ITGAVP06756 1048 aa7.77□□□□□ -1.17
PABPC1-216ENST00000520868 THBDP07204 575 aa7.77□□□□□ -1.17
PABPC1-216ENST00000520868 VEGFAP15692 232 aaPredicted RBP7.77□□□□□ -1.17
PABPC1-216ENST00000520868 SLC9A5Q14940 896 aa7.77□□□□□ -1.17
PABPC1-216ENST00000520868 VMACQ2NL98 169 aa7.77□□□□□ -1.17
PABPC1-216ENST00000520868 CC2D1BQ5T0F9 858 aaKnown RBP7.77□□□□□ -1.17
PABPC1-216ENST00000520868 E4F1Q66K89 784 aaPredicted RBP7.77□□□□□ -1.17
PABPC1-216ENST00000520868 CNKSR3Q6P9H4 555 aa7.77□□□□□ -1.17
PABPC1-216ENST00000520868 TTLL10Q6ZVT0 673 aa7.77□□□□□ -1.17
PABPC1-216ENST00000520868 TTC5Q8N0Z6 440 aa7.77□□□□□ -1.17
PABPC1-216ENST00000520868 BTN2A2Q8WVV5 523 aa7.77□□□□□ -1.17
PABPC1-216ENST00000520868 PEX11GQ96HA9 241 aa7.77□□□□□ -1.17
PABPC1-216ENST00000520868 MTA3Q9BTC8 594 aa7.77□□□□□ -1.17
PABPC1-216ENST00000520868 LGR4Q9BXB1 951 aa7.77□□□□□ -1.17
PABPC1-216ENST00000520868 RNF38Q9H0F5 515 aa7.77□□□□□ -1.17
PABPC1-216ENST00000520868 FBLN5Q9UBX5 448 aa7.77□□□□□ -1.17
PABPC1-216ENST00000520868 PCNTO95613 3336 aa7.76□□□□□ -1.17
PABPC1-216ENST00000520868 TJP1Q07157 1748 aa7.76□□□□□ -1.17
PABPC1-216ENST00000520868 CPP00450 1065 aa7.76□□□□□ -1.17
PABPC1-216ENST00000520868 AFF3P51826 1226 aaKnown RBP7.76□□□□□ -1.17
PABPC1-216ENST00000520868 EIF5P55010 431 aaKnown RBP7.76□□□□□ -1.17
PABPC1-216ENST00000520868 PRR5P85299 388 aa7.76□□□□□ -1.17
PABPC1-216ENST00000520868 TBC1D9BQ66K14 1250 aa7.76□□□□□ -1.17
PABPC1-216ENST00000520868 WWC2Q6AWC2 1192 aa7.76□□□□□ -1.17
PABPC1-216ENST00000520868 FAM129CQ86XR2 697 aa7.76□□□□□ -1.17
PABPC1-216ENST00000520868 DACT3Q96B18 629 aaPredicted RBP7.76□□□□□ -1.17
PABPC1-216ENST00000520868 TSPAN17Q96FV3 270 aa7.76□□□□□ -1.17
PABPC1-216ENST00000520868 RXFP1Q9HBX9 757 aa7.76□□□□□ -1.17
PABPC1-216ENST00000520868 BRCA1P38398 1863 aaKnown RBP7.76□□□□□ -1.17
PABPC1-216ENST00000520868 CARMIL3Q8ND23 1372 aa7.75□□□□□ -1.17
PABPC1-216ENST00000520868 U2SURPO15042 1029 aaKnown RBP7.75□□□□□ -1.17
PABPC1-216ENST00000520868 GJB6O95452 261 aa7.75□□□□□ -1.17
PABPC1-216ENST00000520868 SCG5P05408 212 aa7.75□□□□□ -1.17
PABPC1-216ENST00000520868 SNRPB2P08579 225 aaKnown RBP7.75□□□□□ -1.17
PABPC1-216ENST00000520868 BMP7P18075 431 aa7.75□□□□□ -1.17
PABPC1-216ENST00000520868 TEFQ10587 303 aa7.75□□□□□ -1.17
PABPC1-216ENST00000520868 KCNAB2Q13303 367 aa7.75□□□□□ -1.17
PABPC1-216ENST00000520868 MRM1Q6IN84 353 aaKnown RBP7.75□□□□□ -1.17
PABPC1-216ENST00000520868 KRTAP5-3Q6L8H2 238 aa7.75□□□□□ -1.17
PABPC1-216ENST00000520868 ANKS3Q6ZW76 656 aa7.75□□□□□ -1.17
PABPC1-216ENST00000520868 IL17REQ8NFR9 667 aa7.75□□□□□ -1.17
PABPC1-216ENST00000520868 NPLOC4Q8TAT6 608 aa7.75□□□□□ -1.17
PABPC1-216ENST00000520868 MICAL1Q8TDZ2 1067 aa7.75□□□□□ -1.17
PABPC1-216ENST00000520868 FRS2Q8WU20 508 aa7.75□□□□□ -1.17
PABPC1-216ENST00000520868 HNRNPLLQ8WVV9 542 aaKnown RBP7.75□□□□□ -1.17
PABPC1-216ENST00000520868 ZNF496Q96IT1 587 aaPredicted RBP7.75□□□□□ -1.17
PABPC1-216ENST00000520868 RAPGEFL1Q9UHV5 662 aa7.75□□□□□ -1.17
PABPC1-216ENST00000520868 ARFGEF1Q9Y6D6 1849 aa7.75□□□□□ -1.17
PABPC1-216ENST00000520868 WDR90Q96KV7 1748 aa7.75□□□□□ -1.17
PABPC1-216ENST00000520868 NPHP1O15259 732 aa7.74□□□□□ -1.17
PABPC1-216ENST00000520868 TRIM13O60858 407 aa7.74□□□□□ -1.17
PABPC1-216ENST00000520868 PPP1R11O60927 126 aaPredicted RBP7.74□□□□□ -1.17
PABPC1-216ENST00000520868 A1BGP04217 495 aa7.74□□□□□ -1.17
PABPC1-216ENST00000520868 NCAM1P13591 858 aa7.74□□□□□ -1.17
PABPC1-216ENST00000520868 IGFBP6P24592 240 aaPredicted RBP7.74□□□□□ -1.17
PABPC1-216ENST00000520868 PRR5LQ6MZQ0 368 aa7.74□□□□□ -1.17
PABPC1-216ENST00000520868 ZNF790Q6PG37 636 aa7.74□□□□□ -1.17
PABPC1-216ENST00000520868 NPM2Q86SE8 214 aaKnown RBP7.74□□□□□ -1.17
PABPC1-216ENST00000520868 ALG3Q92685 438 aa7.74□□□□□ -1.17
PABPC1-216ENST00000520868 BRIP1Q9BX63 1249 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms