RNA–Protein interactions for RNA: ENST00000520850.5

TNPO1-212, Transcript of transportin 1, humanhuman

TSL 2

Gene TNPO1, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-212ENST00000520850 BRAPQ7Z569 592 aa18.28■□□□□ 0.52
TNPO1-212ENST00000520850 KIAA0319LQ8IZA0 1049 aa18.28■□□□□ 0.52
TNPO1-212ENST00000520850 DNAJB3Q8WWF6 145 aa18.28■□□□□ 0.52
TNPO1-212ENST00000520850 APBB2Q92870 758 aa18.28■□□□□ 0.52
TNPO1-212ENST00000520850 CEP89Q96ST8 783 aa18.28■□□□□ 0.52
TNPO1-212ENST00000520850 ZSWIM4Q9H7M6 989 aa18.28■□□□□ 0.52
TNPO1-212ENST00000520850 STK24Q9Y6E0 443 aa18.28■□□□□ 0.52
TNPO1-212ENST00000520850 LAMA2P24043 3122 aaKnown RBP18.27■□□□□ 0.52
TNPO1-212ENST00000520850 IGKV6-21A0A0C4DH24 114 aa18.27■□□□□ 0.52
TNPO1-212ENST00000520850 OR52Z1P0C646 297 aa18.27■□□□□ 0.52
TNPO1-212ENST00000520850 MUTP22033 750 aa18.27■□□□□ 0.52
TNPO1-212ENST00000520850 TMOD1P28289 359 aa18.27■□□□□ 0.52
TNPO1-212ENST00000520850 FXR2P51116 673 aaKnown RBP eCLIP18.27■□□□□ 0.522e-7■■■■□ 20.6
TNPO1-212ENST00000520850 MRPS6P82932 125 aaKnown RBP18.27■□□□□ 0.52
TNPO1-212ENST00000520850 MCTP1Q6DN14 999 aa18.27■□□□□ 0.52
TNPO1-212ENST00000520850 OTUD6AQ7L8S5 288 aa18.27■□□□□ 0.52
TNPO1-212ENST00000520850 DEFB128Q7Z7B8 93 aa18.27■□□□□ 0.52
TNPO1-212ENST00000520850 HSCBQ8IWL3 235 aa18.27■□□□□ 0.52
TNPO1-212ENST00000520850 LINC01465Q8N7H1 131 aa18.27■□□□□ 0.52
TNPO1-212ENST00000520850 TRAPPC12Q8WVT3 735 aa18.27■□□□□ 0.52
TNPO1-212ENST00000520850 JPH2Q9BR39 696 aaPredicted RBP18.27■□□□□ 0.52
TNPO1-212ENST00000520850 FTOQ9C0B1 505 aaKnown RBP eCLIP18.27■□□□□ 0.52
TNPO1-212ENST00000520850 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.27■□□□□ 0.52
TNPO1-212ENST00000520850 SCN5AQ14524 2016 aa18.27■□□□□ 0.51
TNPO1-212ENST00000520850 ATP2B1P20020 1258 aa18.26■□□□□ 0.51
TNPO1-212ENST00000520850 IKBKEQ14164 716 aa18.26■□□□□ 0.51
TNPO1-212ENST00000520850 ANO5Q75V66 913 aa18.26■□□□□ 0.51
TNPO1-212ENST00000520850 OTOP2Q7RTS6 562 aa18.26■□□□□ 0.51
TNPO1-212ENST00000520850 BANK1Q8NDB2 785 aa18.26■□□□□ 0.51
TNPO1-212ENST00000520850 EIF2AK1Q9BQI3 630 aaKnown RBP18.26■□□□□ 0.51
TNPO1-212ENST00000520850 SLC4A7Q9Y6M7 1214 aa18.26■□□□□ 0.51
TNPO1-212ENST00000520850 TET1Q8NFU7 2136 aa18.26■□□□□ 0.51
TNPO1-212ENST00000520850 TMEM265A0A087WTH1 108 aa18.25■□□□□ 0.51
TNPO1-212ENST00000520850 M0QZ92 97 aa18.25■□□□□ 0.51
TNPO1-212ENST00000520850 SOX1O00570 391 aaPredicted RBP18.25■□□□□ 0.51
TNPO1-212ENST00000520850 MAFO75444 373 aaPredicted RBP18.25■□□□□ 0.51
TNPO1-212ENST00000520850 SYT1P21579 422 aa18.25■□□□□ 0.51
TNPO1-212ENST00000520850 PTGDRQ13258 359 aa18.25■□□□□ 0.51
TNPO1-212ENST00000520850 MKRN4PQ13434 485 aaPredicted RBP18.25■□□□□ 0.51
TNPO1-212ENST00000520850 NCAPH2Q6IBW4 605 aa18.25■□□□□ 0.51
TNPO1-212ENST00000520850 SEPT8Q92599 483 aa18.25■□□□□ 0.51
TNPO1-212ENST00000520850 SLC9A7Q96T83 725 aa18.25■□□□□ 0.51
TNPO1-212ENST00000520850 LXNQ9BS40 222 aa18.25■□□□□ 0.51
TNPO1-212ENST00000520850 POLR3CQ9BUI4 534 aaPredicted RBP18.25■□□□□ 0.51
TNPO1-212ENST00000520850 CELF4Q9BZC1 486 aaKnown RBP18.25■□□□□ 0.51
TNPO1-212ENST00000520850 TUFT1Q9NNX1 390 aa18.25■□□□□ 0.51
TNPO1-212ENST00000520850 CXXC1Q9P0U4 656 aaPredicted RBP18.25■□□□□ 0.51
TNPO1-212ENST00000520850 PCDHB6Q9Y5E3 794 aa18.25■□□□□ 0.51
TNPO1-212ENST00000520850 DDX11L8A8MPP1 907 aa18.24■□□□□ 0.51
TNPO1-212ENST00000520850 YWHABP31946 246 aaKnown RBP18.24■□□□□ 0.51
TNPO1-212ENST00000520850 TBC1D8BQ0IIM8 1120 aa18.24■□□□□ 0.51
TNPO1-212ENST00000520850 TMEM266Q2M3C6 531 aa18.24■□□□□ 0.51
TNPO1-212ENST00000520850 FBXO47Q5MNV8 452 aa18.24■□□□□ 0.51
TNPO1-212ENST00000520850 ARL6IP4Q66PJ3 421 aaKnown RBP18.24■□□□□ 0.51
TNPO1-212ENST00000520850 EFCAB12Q6NXP0 572 aa18.24■□□□□ 0.51
TNPO1-212ENST00000520850 IGSF22Q8N9C0 903 aa18.24■□□□□ 0.51
TNPO1-212ENST00000520850 DBF4BQ8NFT6 615 aa18.24■□□□□ 0.51
TNPO1-212ENST00000520850 DYDC2Q96IM9 177 aa18.24■□□□□ 0.51
TNPO1-212ENST00000520850 RAB34Q9BZG1 259 aa18.24■□□□□ 0.51
TNPO1-212ENST00000520850 CYP26B1Q9NR63 512 aa18.24■□□□□ 0.51
TNPO1-212ENST00000520850 ANKEF1Q9NU02 776 aa18.24■□□□□ 0.51
TNPO1-212ENST00000520850 RGL1Q9NZL6 768 aa18.24■□□□□ 0.51
TNPO1-212ENST00000520850 TRPV2Q9Y5S1 764 aa18.24■□□□□ 0.51
TNPO1-212ENST00000520850 CDY2AQ9Y6F7 541 aa18.24■□□□□ 0.51
TNPO1-212ENST00000520850 GAS2O43903 313 aaKnown RBP18.23■□□□□ 0.51
TNPO1-212ENST00000520850 BMP15O95972 392 aa18.23■□□□□ 0.51
TNPO1-212ENST00000520850 RPA1P27694 616 aa18.23■□□□□ 0.51
TNPO1-212ENST00000520850 TECP42680 631 aa18.23■□□□□ 0.51
TNPO1-212ENST00000520850 ATP2C1P98194 919 aaPredicted RBP18.23■□□□□ 0.51
TNPO1-212ENST00000520850 CACNB1Q02641 598 aaPredicted RBP18.23■□□□□ 0.51
TNPO1-212ENST00000520850 ODR4Q5SWX8 454 aa18.23■□□□□ 0.51
TNPO1-212ENST00000520850 TSHZ1Q6ZSZ6 1077 aa18.23■□□□□ 0.51
TNPO1-212ENST00000520850 KCTD17Q8N5Z5 321 aa18.23■□□□□ 0.51
TNPO1-212ENST00000520850 ERMNQ8TAM6 284 aa18.23■□□□□ 0.51
TNPO1-212ENST00000520850 FAM49AQ9H0Q0 323 aaPredicted RBP18.23■□□□□ 0.51
TNPO1-212ENST00000520850 ZSCAN16Q9H4T2 348 aaPredicted RBP18.23■□□□□ 0.51
TNPO1-212ENST00000520850 WRAP73Q9P2S5 460 aaPredicted RBP18.23■□□□□ 0.51
TNPO1-212ENST00000520850 SEPT9Q9UHD8 586 aaPredicted RBP18.23■□□□□ 0.51
TNPO1-212ENST00000520850 EVPLQ92817 2033 aa18.22■□□□□ 0.51
TNPO1-212ENST00000520850 GPR32O75388 356 aa18.22■□□□□ 0.51
TNPO1-212ENST00000520850 CTSHP09668 335 aa18.22■□□□□ 0.51
TNPO1-212ENST00000520850 SPATA31C1P0DKV0 1188 aa18.22■□□□□ 0.51
TNPO1-212ENST00000520850 RFC5P40937 340 aa18.22■□□□□ 0.51
TNPO1-212ENST00000520850 DNM2P50570 870 aa18.22■□□□□ 0.51
TNPO1-212ENST00000520850 CRYBB1P53674 252 aaPredicted RBP18.22■□□□□ 0.51
TNPO1-212ENST00000520850 LPIN1Q14693 890 aa18.22■□□□□ 0.51
TNPO1-212ENST00000520850 TPH2Q8IWU9 490 aa18.22■□□□□ 0.51
TNPO1-212ENST00000520850 METTL13Q8N6R0 699 aa18.22■□□□□ 0.51
TNPO1-212ENST00000520850 MAP7D2Q96T17 732 aa18.22■□□□□ 0.51
TNPO1-212ENST00000520850 FTHL17Q9BXU8 183 aa18.22■□□□□ 0.51
TNPO1-212ENST00000520850 IFIH1Q9BYX4 1025 aaKnown RBP18.22■□□□□ 0.51
TNPO1-212ENST00000520850 DHX33Q9H6R0 707 aaKnown RBP18.22■□□□□ 0.51
TNPO1-212ENST00000520850 POTEMA6NI47 508 aa18.21■□□□□ 0.51
TNPO1-212ENST00000520850 STX6O43752 255 aa18.21■□□□□ 0.51
TNPO1-212ENST00000520850 ATP2A2P16615 1042 aaKnown RBP18.21■□□□□ 0.51
TNPO1-212ENST00000520850 WDR5P61964 334 aaKnown RBP18.21■□□□□ 0.51
TNPO1-212ENST00000520850 CTTNQ14247 550 aaKnown RBP18.21■□□□□ 0.51
TNPO1-212ENST00000520850 NBR1Q14596 966 aa18.21■□□□□ 0.51
TNPO1-212ENST00000520850 RAB30Q15771 203 aa18.21■□□□□ 0.51
TNPO1-212ENST00000520850 MTERF2Q49AM1 385 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms