RNA–Protein interactions for RNA: ENST00000520752.1

SHPRH-208, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 4

Gene SHPRH, Length 821 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-208ENST00000520752 CFAP100Q494V2 611 aa9.46□□□□□ -0.9
SHPRH-208ENST00000520752 ZNF569Q5MCW4 686 aa9.46□□□□□ -0.9
SHPRH-208ENST00000520752 SPECC1LQ69YQ0 1117 aa9.46□□□□□ -0.9
SHPRH-208ENST00000520752 TXNDC11Q6PKC3 985 aa9.46□□□□□ -0.9
SHPRH-208ENST00000520752 Q6ZUG5 572 aa9.46□□□□□ -0.9
SHPRH-208ENST00000520752 CDC37L1Q7L3B6 337 aa9.46□□□□□ -0.9
SHPRH-208ENST00000520752 FBXO11Q86XK2 927 aa9.46□□□□□ -0.9
SHPRH-208ENST00000520752 MREGQ8N565 214 aa9.46□□□□□ -0.9
SHPRH-208ENST00000520752 CCT6BQ92526 530 aa9.46□□□□□ -0.9
SHPRH-208ENST00000520752 MRPS27Q92552 414 aaKnown RBP9.46□□□□□ -0.9
SHPRH-208ENST00000520752 KIFAP3Q92845 792 aa9.46□□□□□ -0.9
SHPRH-208ENST00000520752 DHRS1Q96LJ7 313 aa9.46□□□□□ -0.9
SHPRH-208ENST00000520752 NECAB3Q96P71 396 aaPredicted RBP9.46□□□□□ -0.9
SHPRH-208ENST00000520752 CORO1BQ9BR76 489 aa9.46□□□□□ -0.9
SHPRH-208ENST00000520752 TCHPQ9BT92 498 aa9.46□□□□□ -0.9
SHPRH-208ENST00000520752 NACA2Q9H009 215 aa9.46□□□□□ -0.9
SHPRH-208ENST00000520752 RABEP2Q9H5N1 569 aa9.46□□□□□ -0.9
SHPRH-208ENST00000520752 ZSWIM4Q9H7M6 989 aa9.46□□□□□ -0.9
SHPRH-208ENST00000520752 TMEM39AQ9NV64 488 aa9.46□□□□□ -0.9
SHPRH-208ENST00000520752 AATFQ9NY61 560 aaKnown RBP eCLIP9.46□□□□□ -0.9
SHPRH-208ENST00000520752 CFDP1Q9UEE9 299 aaPredicted RBP9.46□□□□□ -0.9
SHPRH-208ENST00000520752 PTPRTO14522 1441 aa9.46□□□□□ -0.9
SHPRH-208ENST00000520752 GPATCH8Q9UKJ3 1502 aaKnown RBP9.46□□□□□ -0.9
SHPRH-208ENST00000520752 IQGAP3Q86VI3 1631 aa9.45□□□□□ -0.9
SHPRH-208ENST00000520752 MYH15Q9Y2K3 1946 aa9.45□□□□□ -0.9
SHPRH-208ENST00000520752 DPPA5A6NC42 116 aa9.45□□□□□ -0.9
SHPRH-208ENST00000520752 CCT8L1PA6NM43 557 aa9.45□□□□□ -0.9
SHPRH-208ENST00000520752 IFIT3O14879 490 aaKnown RBP9.45□□□□□ -0.9
SHPRH-208ENST00000520752 DIAPH2O60879 1101 aa9.45□□□□□ -0.9
SHPRH-208ENST00000520752 STIP1P31948 543 aaKnown RBP9.45□□□□□ -0.9
SHPRH-208ENST00000520752 KRT9P35527 623 aa9.45□□□□□ -0.9
SHPRH-208ENST00000520752 NEK2P51955 445 aa9.45□□□□□ -0.9
SHPRH-208ENST00000520752 ZNF131P52739 623 aa9.45□□□□□ -0.9
SHPRH-208ENST00000520752 KLC1Q07866 573 aa9.45□□□□□ -0.9
SHPRH-208ENST00000520752 CBX3Q13185 183 aa9.45□□□□□ -0.9
SHPRH-208ENST00000520752 TRIM28Q13263 835 aaKnown RBP9.45□□□□□ -0.9
SHPRH-208ENST00000520752 BYSLQ13895 437 aaKnown RBP9.45□□□□□ -0.9
SHPRH-208ENST00000520752 BTG3Q14201 252 aaPredicted RBP9.45□□□□□ -0.9
SHPRH-208ENST00000520752 CFAP58Q5T655 872 aa9.45□□□□□ -0.9
SHPRH-208ENST00000520752 GKAP1Q5VSY0 366 aaPredicted RBP9.45□□□□□ -0.9
SHPRH-208ENST00000520752 HIBCHQ6NVY1 386 aaPredicted RBP9.45□□□□□ -0.9
SHPRH-208ENST00000520752 IRGCQ6NXR0 463 aa9.45□□□□□ -0.9
SHPRH-208ENST00000520752 C16orf87Q6PH81 154 aa9.45□□□□□ -0.9
SHPRH-208ENST00000520752 TRAPPC11Q7Z392 1133 aa9.45□□□□□ -0.9
SHPRH-208ENST00000520752 ZNF572Q7Z3I7 529 aaPredicted RBP9.45□□□□□ -0.9
SHPRH-208ENST00000520752 ERICH1Q86X53 443 aa9.45□□□□□ -0.9
SHPRH-208ENST00000520752 FMR1NBQ8N0W7 255 aaPredicted RBP9.45□□□□□ -0.9
SHPRH-208ENST00000520752 MMGT1Q8N4V1 131 aa9.45□□□□□ -0.9
SHPRH-208ENST00000520752 TC2NQ8N9U0 490 aa9.45□□□□□ -0.9
SHPRH-208ENST00000520752 PHC3Q8NDX5 983 aa9.45□□□□□ -0.9
SHPRH-208ENST00000520752 DDX54Q8TDD1 881 aaKnown RBP9.45□□□□□ -0.9
SHPRH-208ENST00000520752 OTUD7AQ8TE49 926 aaPredicted RBP9.45□□□□□ -0.9
SHPRH-208ENST00000520752 SH3TC2Q8TF17 1288 aa9.45□□□□□ -0.9
SHPRH-208ENST00000520752 ATRIPQ8WXE1 791 aa9.45□□□□□ -0.9
SHPRH-208ENST00000520752 GFM2Q969S9 779 aaKnown RBP9.45□□□□□ -0.9
SHPRH-208ENST00000520752 FGD4Q96M96 766 aa9.45□□□□□ -0.9
SHPRH-208ENST00000520752 SDF4Q9BRK5 362 aa9.45□□□□□ -0.9
SHPRH-208ENST00000520752 LLPHQ9BRT6 129 aaKnown RBP9.45□□□□□ -0.9
SHPRH-208ENST00000520752 NOC4LQ9BVI4 516 aaKnown RBP9.45□□□□□ -0.9
SHPRH-208ENST00000520752 MAK16Q9BXY0 300 aaKnown RBP9.45□□□□□ -0.9
SHPRH-208ENST00000520752 METTL5Q9NRN9 209 aaKnown RBP9.45□□□□□ -0.9
SHPRH-208ENST00000520752 PCMTD2Q9NV79 361 aa9.45□□□□□ -0.9
SHPRH-208ENST00000520752 CTTNBP2NLQ9P2B4 639 aa9.45□□□□□ -0.9
SHPRH-208ENST00000520752 LARSQ9P2J5 1176 aaKnown RBP9.45□□□□□ -0.9
SHPRH-208ENST00000520752 CEP131Q9UPN4 1083 aa9.45□□□□□ -0.9
SHPRH-208ENST00000520752 SH3GLB1Q9Y371 365 aa9.45□□□□□ -0.9
SHPRH-208ENST00000520752 ZFYVE9O95405 1425 aa9.45□□□□□ -0.9
SHPRH-208ENST00000520752 CDC42BPGQ6DT37 1551 aa9.45□□□□□ -0.9
SHPRH-208ENST00000520752 AKR1B15C9JRZ8 316 aaPredicted RBP9.44□□□□□ -0.9
SHPRH-208ENST00000520752 PSMD14O00487 310 aa9.44□□□□□ -0.9
SHPRH-208ENST00000520752 SCAMP3O14828 347 aaKnown RBP9.44□□□□□ -0.9
SHPRH-208ENST00000520752 TPPPO94811 219 aa9.44□□□□□ -0.9
SHPRH-208ENST00000520752 SLC3A2P08195 630 aaKnown RBP9.44□□□□□ -0.9
SHPRH-208ENST00000520752 CPA3P15088 417 aa9.44□□□□□ -0.9
SHPRH-208ENST00000520752 ATP2A2P16615 1042 aaKnown RBP9.44□□□□□ -0.9
SHPRH-208ENST00000520752 TRIM21P19474 475 aaKnown RBP9.44□□□□□ -0.9
SHPRH-208ENST00000520752 NR1D1P20393 614 aa9.44□□□□□ -0.9
SHPRH-208ENST00000520752 ATP6V1C1P21283 382 aa9.44□□□□□ -0.9
SHPRH-208ENST00000520752 MAGEA10P43363 369 aaPredicted RBP9.44□□□□□ -0.9
SHPRH-208ENST00000520752 MTHFSP49914 203 aa9.44□□□□□ -0.9
SHPRH-208ENST00000520752 SCNN1BP51168 640 aa9.44□□□□□ -0.9
SHPRH-208ENST00000520752 HDAC4P56524 1084 aa9.44□□□□□ -0.9
SHPRH-208ENST00000520752 HDLBPQ00341 1268 aaKnown RBP9.44□□□□□ -0.9
SHPRH-208ENST00000520752 ADCY1Q08828 1119 aa9.44□□□□□ -0.9
SHPRH-208ENST00000520752 MAP3K12Q12852 859 aa9.44□□□□□ -0.9
SHPRH-208ENST00000520752 PPP1R7Q15435 360 aa9.44□□□□□ -0.9
SHPRH-208ENST00000520752 TAF11Q15544 211 aa9.44□□□□□ -0.9
SHPRH-208ENST00000520752 ANKRD20A2Q5SQ80 823 aa9.44□□□□□ -0.9
SHPRH-208ENST00000520752 AKNAD1Q5T1N1 836 aa9.44□□□□□ -0.9
SHPRH-208ENST00000520752 SOGA3Q5TF21 947 aa9.44□□□□□ -0.9
SHPRH-208ENST00000520752 ANKRD20A1Q5TYW2 823 aa9.44□□□□□ -0.9
SHPRH-208ENST00000520752 ANKRD20A3Q5VUR7 823 aa9.44□□□□□ -0.9
SHPRH-208ENST00000520752 HGSNATQ68CP4 663 aa9.44□□□□□ -0.9
SHPRH-208ENST00000520752 ADALQ6DHV7 355 aa9.44□□□□□ -0.9
SHPRH-208ENST00000520752 LRIG3Q6UXM1 1119 aa9.44□□□□□ -0.9
SHPRH-208ENST00000520752 TPTE2Q6XPS3 522 aa9.44□□□□□ -0.9
SHPRH-208ENST00000520752 TOGARAM2Q6ZUX3 1019 aa9.44□□□□□ -0.9
SHPRH-208ENST00000520752 TMTC1Q8IUR5 882 aa9.44□□□□□ -0.9
SHPRH-208ENST00000520752 LRRC49Q8IUZ0 686 aa9.44□□□□□ -0.9
SHPRH-208ENST00000520752 ANKS4BQ8N8V4 417 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms