RNA–Protein interactions for RNA: ENST00000520525.1

TRAPPC13-212, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-212ENST00000520525 OTOP1Q7RTM1 612 aa4.54□□□□□ -1.68
TRAPPC13-212ENST00000520525 PLEKHH3Q7Z736 793 aa4.54□□□□□ -1.68
TRAPPC13-212ENST00000520525 PTRH1Q86Y79 214 aaKnown RBP4.54□□□□□ -1.68
TRAPPC13-212ENST00000520525 KBTBD2Q8IY47 623 aa4.54□□□□□ -1.68
TRAPPC13-212ENST00000520525 KLHL36Q8N4N3 616 aa4.54□□□□□ -1.68
TRAPPC13-212ENST00000520525 C2orf69Q8N8R5 385 aa4.54□□□□□ -1.68
TRAPPC13-212ENST00000520525 CHST14Q8NCH0 376 aa4.54□□□□□ -1.68
TRAPPC13-212ENST00000520525 SH3RF3Q8TEJ3 882 aaPredicted RBP4.54□□□□□ -1.68
TRAPPC13-212ENST00000520525 CHAC2Q8WUX2 184 aa4.54□□□□□ -1.68
TRAPPC13-212ENST00000520525 DVL3Q92997 716 aaPredicted RBP4.54□□□□□ -1.68
TRAPPC13-212ENST00000520525 CD244Q9BZW8 370 aa4.54□□□□□ -1.68
TRAPPC13-212ENST00000520525 CAAP1Q9H8G2 361 aa4.54□□□□□ -1.68
TRAPPC13-212ENST00000520525 CABP5Q9NP86 173 aa4.54□□□□□ -1.68
TRAPPC13-212ENST00000520525 KCND1Q9NSA2 647 aa4.54□□□□□ -1.68
TRAPPC13-212ENST00000520525 B4GALT6Q9UBX8 382 aa4.54□□□□□ -1.68
TRAPPC13-212ENST00000520525 ST6GALNAC2Q9UJ37 374 aa4.54□□□□□ -1.68
TRAPPC13-212ENST00000520525 ZFP69BQ9UJL9 534 aa4.54□□□□□ -1.68
TRAPPC13-212ENST00000520525 ADAM29Q9UKF5 820 aa4.54□□□□□ -1.68
TRAPPC13-212ENST00000520525 NUB1Q9Y5A7 615 aa4.54□□□□□ -1.68
TRAPPC13-212ENST00000520525 ZNF839A8K0R7 811 aa4.53□□□□□ -1.68
TRAPPC13-212ENST00000520525 KCNK3O14649 394 aa4.53□□□□□ -1.68
TRAPPC13-212ENST00000520525 SOX5P35711 763 aa4.53□□□□□ -1.68
TRAPPC13-212ENST00000520525 PFKPQ01813 784 aa4.53□□□□□ -1.68
TRAPPC13-212ENST00000520525 ICAM4Q14773 271 aa4.53□□□□□ -1.68
TRAPPC13-212ENST00000520525 SURF1Q15526 300 aa4.53□□□□□ -1.68
TRAPPC13-212ENST00000520525 SMAD2Q15796 467 aaKnown RBP4.53□□□□□ -1.68
TRAPPC13-212ENST00000520525 FIGNQ5HY92 759 aa4.53□□□□□ -1.68
TRAPPC13-212ENST00000520525 FSTL4Q6MZW2 842 aa4.53□□□□□ -1.68
TRAPPC13-212ENST00000520525 GLB1LQ6UWU2 654 aa4.53□□□□□ -1.68
TRAPPC13-212ENST00000520525 KIF18BQ86Y91 864 aa4.53□□□□□ -1.68
TRAPPC13-212ENST00000520525 NLGN4XQ8N0W4 816 aa4.53□□□□□ -1.68
TRAPPC13-212ENST00000520525 NXPE1Q8N323 547 aa4.53□□□□□ -1.68
TRAPPC13-212ENST00000520525 UBR7Q8N806 425 aa4.53□□□□□ -1.68
TRAPPC13-212ENST00000520525 DNERQ8NFT8 737 aa4.53□□□□□ -1.68
TRAPPC13-212ENST00000520525 LEO1Q8WVC0 666 aaPredicted RBP4.53□□□□□ -1.68
TRAPPC13-212ENST00000520525 PTPN18Q99952 460 aa4.53□□□□□ -1.68
TRAPPC13-212ENST00000520525 MEGF9Q9H1U4 602 aa4.53□□□□□ -1.68
TRAPPC13-212ENST00000520525 ATP23Q9Y6H3 246 aa4.53□□□□□ -1.68
TRAPPC13-212ENST00000520525 SLC12A8A0AV02 714 aa4.52□□□□□ -1.69
TRAPPC13-212ENST00000520525 PTPDC1A2A3K4 754 aa4.52□□□□□ -1.69
TRAPPC13-212ENST00000520525 ZNF891A8MT65 544 aaPredicted RBP4.52□□□□□ -1.69
TRAPPC13-212ENST00000520525 CLASP2O75122 1294 aaKnown RBP4.52□□□□□ -1.69
TRAPPC13-212ENST00000520525 CHGBP05060 677 aa4.52□□□□□ -1.69
TRAPPC13-212ENST00000520525 ZBTB48P10074 688 aaPredicted RBP4.52□□□□□ -1.69
TRAPPC13-212ENST00000520525 GLRBP48167 497 aa4.52□□□□□ -1.69
TRAPPC13-212ENST00000520525 PPP2CBP62714 309 aa4.52□□□□□ -1.69
TRAPPC13-212ENST00000520525 PPP2CAP67775 309 aa4.52□□□□□ -1.69
TRAPPC13-212ENST00000520525 DSG1Q02413 1049 aa4.52□□□□□ -1.69
TRAPPC13-212ENST00000520525 CDSNQ15517 529 aa4.52□□□□□ -1.69
TRAPPC13-212ENST00000520525 ARHGAP44Q17R89 818 aa4.52□□□□□ -1.69
TRAPPC13-212ENST00000520525 Q6ZUG5 572 aa4.52□□□□□ -1.69
TRAPPC13-212ENST00000520525 NOSTRINQ8IVI9 506 aa4.52□□□□□ -1.69
TRAPPC13-212ENST00000520525 STPG3Q8N7X2 389 aa4.52□□□□□ -1.69
TRAPPC13-212ENST00000520525 CHST13Q8NET6 341 aa4.52□□□□□ -1.69
TRAPPC13-212ENST00000520525 BOCQ9BWV1 1114 aa4.52□□□□□ -1.69
TRAPPC13-212ENST00000520525 BARX1Q9HBU1 254 aaPredicted RBP4.52□□□□□ -1.69
TRAPPC13-212ENST00000520525 CD248Q9HCU0 757 aa4.52□□□□□ -1.69
TRAPPC13-212ENST00000520525 ARHGAP20Q9P2F6 1191 aa4.52□□□□□ -1.69
TRAPPC13-212ENST00000520525 ZDHHC9Q9Y397 364 aa4.52□□□□□ -1.69
TRAPPC13-212ENST00000520525 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.51□□□□□ -1.69
TRAPPC13-212ENST00000520525 FAM90A27PA6NNH2 459 aa4.51□□□□□ -1.69
TRAPPC13-212ENST00000520525 SCDO00767 359 aa4.51□□□□□ -1.69
TRAPPC13-212ENST00000520525 B4GALT4O60513 344 aa4.51□□□□□ -1.69
TRAPPC13-212ENST00000520525 KRT37O76014 449 aa4.51□□□□□ -1.69
TRAPPC13-212ENST00000520525 FBXO21O94952 628 aa4.51□□□□□ -1.69
TRAPPC13-212ENST00000520525 CNOT4O95628 575 aaKnown RBP4.51□□□□□ -1.69
TRAPPC13-212ENST00000520525 F2P00734 622 aa4.51□□□□□ -1.69
TRAPPC13-212ENST00000520525 ENO2P09104 434 aaPredicted RBP4.51□□□□□ -1.69
TRAPPC13-212ENST00000520525 PTPN1P18031 435 aaKnown RBP4.51□□□□□ -1.69
TRAPPC13-212ENST00000520525 POU3F3P20264 500 aaPredicted RBP4.51□□□□□ -1.69
TRAPPC13-212ENST00000520525 CNGA1P29973 690 aa4.51□□□□□ -1.69
TRAPPC13-212ENST00000520525 CSF2RBP32927 897 aa4.51□□□□□ -1.69
TRAPPC13-212ENST00000520525 DHCR24Q15392 516 aa4.51□□□□□ -1.69
TRAPPC13-212ENST00000520525 SEC23AQ15436 765 aa4.51□□□□□ -1.69
TRAPPC13-212ENST00000520525 CRB2Q5IJ48 1285 aa4.51□□□□□ -1.69
TRAPPC13-212ENST00000520525 CT47A1Q5JQC4 288 aaPredicted RBP4.51□□□□□ -1.69
TRAPPC13-212ENST00000520525 BTBD8Q5XKL5 378 aa4.51□□□□□ -1.69
TRAPPC13-212ENST00000520525 CREB3L3Q68CJ9 461 aa4.51□□□□□ -1.69
TRAPPC13-212ENST00000520525 ARHGEF18Q6ZSZ5 1173 aa4.51□□□□□ -1.69
TRAPPC13-212ENST00000520525 EP400NLQ6ZTU2 488 aa4.51□□□□□ -1.69
TRAPPC13-212ENST00000520525 DDX46Q7L014 1031 aaKnown RBP4.51□□□□□ -1.69
TRAPPC13-212ENST00000520525 STRA8Q7Z7C7 330 aa4.51□□□□□ -1.69
TRAPPC13-212ENST00000520525 AFAP1L2Q8N4X5 818 aa4.51□□□□□ -1.69
TRAPPC13-212ENST00000520525 OR2W6PQ8NHA6 318 aa4.51□□□□□ -1.69
TRAPPC13-212ENST00000520525 AJUBAQ96IF1 538 aa4.51□□□□□ -1.69
TRAPPC13-212ENST00000520525 WWC2-AS2Q96NR7 200 aa4.51□□□□□ -1.69
TRAPPC13-212ENST00000520525 TACO1Q9BSH4 297 aaKnown RBP4.51□□□□□ -1.69
TRAPPC13-212ENST00000520525 FAM126AQ9BYI3 521 aaPredicted RBP4.51□□□□□ -1.69
TRAPPC13-212ENST00000520525 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.51□□□□□ -1.69
TRAPPC13-212ENST00000520525 SLC39A2Q9NP94 309 aa4.51□□□□□ -1.69
TRAPPC13-212ENST00000520525 ZKSCAN5Q9Y2L8 839 aa4.51□□□□□ -1.69
TRAPPC13-212ENST00000520525 NPEPPSL1A6NEC2 478 aa4.5□□□□□ -1.69
TRAPPC13-212ENST00000520525 PATE3B3GLJ2 98 aa4.5□□□□□ -1.69
TRAPPC13-212ENST00000520525 DVL2O14641 736 aa4.5□□□□□ -1.69
TRAPPC13-212ENST00000520525 GAS7O60861 476 aa4.5□□□□□ -1.69
TRAPPC13-212ENST00000520525 FZD7O75084 574 aa4.5□□□□□ -1.69
TRAPPC13-212ENST00000520525 ATP2A2P16615 1042 aaKnown RBP4.5□□□□□ -1.69
TRAPPC13-212ENST00000520525 GJA4P35212 333 aa4.5□□□□□ -1.69
TRAPPC13-212ENST00000520525 SCNN1BP51168 640 aa4.5□□□□□ -1.69
TRAPPC13-212ENST00000520525 IRF9Q00978 393 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms