RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 POLD1P28340 1107 aa5.7□□□□□ -1.5
SQLE-204ENST00000520493 GPATCH3Q96I76 525 aa5.7□□□□□ -1.5
SQLE-204ENST00000520493 CARD11Q9BXL7 1154 aa5.7□□□□□ -1.5
SQLE-204ENST00000520493 SMURF1Q9HCE7 757 aa5.7□□□□□ -1.5
SQLE-204ENST00000520493 FBXO10Q9UK96 956 aa5.7□□□□□ -1.5
SQLE-204ENST00000520493 COQ6Q9Y2Z9 468 aa5.7□□□□□ -1.5
SQLE-204ENST00000520493 FZD7O75084 574 aa5.69□□□□□ -1.5
SQLE-204ENST00000520493 VIL1P09327 827 aaKnown RBP5.69□□□□□ -1.5
SQLE-204ENST00000520493 AOAHP28039 575 aa5.69□□□□□ -1.5
SQLE-204ENST00000520493 CSF2RBP32927 897 aa5.69□□□□□ -1.5
SQLE-204ENST00000520493 ANAPC15P60006 121 aa5.69□□□□□ -1.5
SQLE-204ENST00000520493 CXXC5Q7LFL8 322 aaKnown RBP5.69□□□□□ -1.5
SQLE-204ENST00000520493 GPR155Q7Z3F1 870 aa5.69□□□□□ -1.5
SQLE-204ENST00000520493 BRAPQ7Z569 592 aa5.69□□□□□ -1.5
SQLE-204ENST00000520493 SLC7A14Q8TBB6 771 aa5.69□□□□□ -1.5
SQLE-204ENST00000520493 DVL3Q92997 716 aaPredicted RBP5.69□□□□□ -1.5
SQLE-204ENST00000520493 CDK5RAP1Q96SZ6 601 aaKnown RBP5.69□□□□□ -1.5
SQLE-204ENST00000520493 KATNBL1Q9H079 304 aa5.69□□□□□ -1.5
SQLE-204ENST00000520493 SEC61A2Q9H9S3 476 aa5.69□□□□□ -1.5
SQLE-204ENST00000520493 COL4A3BPQ9Y5P4 624 aa5.69□□□□□ -1.5
SQLE-204ENST00000520493 SLC4A7Q9Y6M7 1214 aa5.69□□□□□ -1.5
SQLE-204ENST00000520493 SLC12A8A0AV02 714 aa5.68□□□□□ -1.5
SQLE-204ENST00000520493 B4E1Z4 1266 aa5.68□□□□□ -1.5
SQLE-204ENST00000520493 SCDO00767 359 aa5.68□□□□□ -1.5
SQLE-204ENST00000520493 KCNK3O14649 394 aa5.68□□□□□ -1.5
SQLE-204ENST00000520493 ASMTLO95671 621 aa5.68□□□□□ -1.5
SQLE-204ENST00000520493 C4BPAP04003 597 aaKnown RBP5.68□□□□□ -1.5
SQLE-204ENST00000520493 MASP1P48740 699 aa5.68□□□□□ -1.5
SQLE-204ENST00000520493 DALRD3Q5D0E6 543 aaKnown RBP5.68□□□□□ -1.5
SQLE-204ENST00000520493 ZMAT1Q5H9K5 638 aa5.68□□□□□ -1.5
SQLE-204ENST00000520493 CRIP3Q6Q6R5 217 aa5.68□□□□□ -1.5
SQLE-204ENST00000520493 KRT26Q7Z3Y9 468 aa5.68□□□□□ -1.5
SQLE-204ENST00000520493 C2orf69Q8N8R5 385 aa5.68□□□□□ -1.5
SQLE-204ENST00000520493 NINJ1Q92982 152 aa5.68□□□□□ -1.5
SQLE-204ENST00000520493 LMF1Q96S06 567 aa5.68□□□□□ -1.5
SQLE-204ENST00000520493 SSBP3Q9BWW4 388 aaPredicted RBP5.68□□□□□ -1.5
SQLE-204ENST00000520493 PCED1AQ9H1Q7 454 aa5.68□□□□□ -1.5
SQLE-204ENST00000520493 DEF6Q9H4E7 631 aa5.68□□□□□ -1.5
SQLE-204ENST00000520493 NCOA5Q9HCD5 579 aaKnown RBP5.68□□□□□ -1.5
SQLE-204ENST00000520493 PCDH12Q9NPG4 1184 aa5.68□□□□□ -1.5
SQLE-204ENST00000520493 KCNH7Q9NS40 1196 aa5.68□□□□□ -1.5
SQLE-204ENST00000520493 GALNT8Q9NY28 637 aa5.68□□□□□ -1.5
SQLE-204ENST00000520493 ST6GALNAC2Q9UJ37 374 aa5.68□□□□□ -1.5
SQLE-204ENST00000520493 TCAF1Q9Y4C2 921 aa5.68□□□□□ -1.5
SQLE-204ENST00000520493 TCRBV16S1A1N1A0A5B0 115 aa5.67□□□□□ -1.5
SQLE-204ENST00000520493 PLD2O14939 933 aa5.67□□□□□ -1.5
SQLE-204ENST00000520493 KCNQ2O43526 872 aa5.67□□□□□ -1.5
SQLE-204ENST00000520493 FNDC3BQ53EP0 1204 aaKnown RBP5.67□□□□□ -1.5
SQLE-204ENST00000520493 HS1BP3Q53T59 392 aa5.67□□□□□ -1.5
SQLE-204ENST00000520493 OTOP2Q7RTS6 562 aa5.67□□□□□ -1.5
SQLE-204ENST00000520493 DDX53Q86TM3 631 aaKnown RBP5.67□□□□□ -1.5
SQLE-204ENST00000520493 HIPK4Q8NE63 616 aa5.67□□□□□ -1.5
SQLE-204ENST00000520493 SCYL1Q96KG9 808 aa5.67□□□□□ -1.5
SQLE-204ENST00000520493 BTBD2Q9BX70 525 aa5.67□□□□□ -1.5
SQLE-204ENST00000520493 METTL14Q9HCE5 456 aaKnown RBP5.67□□□□□ -1.5
SQLE-204ENST00000520493 FOXP2O15409 715 aa5.66□□□□□ -1.5
SQLE-204ENST00000520493 GPR42O15529 346 aa5.66□□□□□ -1.5
SQLE-204ENST00000520493 CNOT4O95628 575 aaKnown RBP5.66□□□□□ -1.5
SQLE-204ENST00000520493 HMGCRP04035 888 aa5.66□□□□□ -1.5
SQLE-204ENST00000520493 ETV4P43268 484 aa5.66□□□□□ -1.5
SQLE-204ENST00000520493 RAC3P60763 192 aa5.66□□□□□ -1.5
SQLE-204ENST00000520493 TOP3AQ13472 1001 aaPredicted RBP5.66□□□□□ -1.5
SQLE-204ENST00000520493 TKFCQ3LXA3 575 aa5.66□□□□□ -1.5
SQLE-204ENST00000520493 TMEM177Q53S58 311 aa5.66□□□□□ -1.5
SQLE-204ENST00000520493 NOSTRINQ8IVI9 506 aa5.66□□□□□ -1.5
SQLE-204ENST00000520493 IGSF22Q8N9C0 903 aa5.66□□□□□ -1.5
SQLE-204ENST00000520493 GIMAP8Q8ND71 665 aaPredicted RBP5.66□□□□□ -1.5
SQLE-204ENST00000520493 CALML6Q8TD86 181 aa5.66□□□□□ -1.5
SQLE-204ENST00000520493 SCLYQ96I15 445 aa5.66□□□□□ -1.5
SQLE-204ENST00000520493 LRRC37BQ96QE4 947 aa5.66□□□□□ -1.5
SQLE-204ENST00000520493 MEGF9Q9H1U4 602 aa5.66□□□□□ -1.5
SQLE-204ENST00000520493 SEMA4AQ9H3S1 761 aa5.66□□□□□ -1.5
SQLE-204ENST00000520493 MMEP08473 750 aa5.65□□□□□ -1.5
SQLE-204ENST00000520493 MC4RP32245 332 aa5.65□□□□□ -1.5
SQLE-204ENST00000520493 ECE1P42892 770 aa5.65□□□□□ -1.5
SQLE-204ENST00000520493 RRADP55042 308 aa5.65□□□□□ -1.5
SQLE-204ENST00000520493 IL13RA1P78552 427 aa5.65□□□□□ -1.5
SQLE-204ENST00000520493 IRF9Q00978 393 aa5.65□□□□□ -1.5
SQLE-204ENST00000520493 ICAM4Q14773 271 aa5.65□□□□□ -1.5
SQLE-204ENST00000520493 TMEM132BQ14DG7 1078 aa5.65□□□□□ -1.5
SQLE-204ENST00000520493 ARHGAP44Q17R89 818 aa5.65□□□□□ -1.5
SQLE-204ENST00000520493 TM4SF20Q53R12 229 aa5.65□□□□□ -1.5
SQLE-204ENST00000520493 OVCH1Q7RTY7 1134 aa5.65□□□□□ -1.5
SQLE-204ENST00000520493 MFSD3Q96ES6 412 aa5.65□□□□□ -1.5
SQLE-204ENST00000520493 WNK4Q96J92 1243 aa5.65□□□□□ -1.5
SQLE-204ENST00000520493 GBP4Q96PP9 640 aa5.65□□□□□ -1.5
SQLE-204ENST00000520493 BOCQ9BWV1 1114 aa5.65□□□□□ -1.5
SQLE-204ENST00000520493 OR10A5Q9H207 317 aa5.65□□□□□ -1.5
SQLE-204ENST00000520493 TYW1Q9NV66 732 aaKnown RBP5.65□□□□□ -1.5
SQLE-204ENST00000520493 INTS7Q9NVH2 962 aaKnown RBP5.65□□□□□ -1.5
SQLE-204ENST00000520493 UCKL1Q9NWZ5 548 aa5.65□□□□□ -1.5
SQLE-204ENST00000520493 BTBD7Q9P203 1132 aa5.65□□□□□ -1.5
SQLE-204ENST00000520493 ASB1Q9Y576 335 aa5.65□□□□□ -1.5
SQLE-204ENST00000520493 B3GALT1Q9Y5Z6 326 aa5.65□□□□□ -1.5
SQLE-204ENST00000520493 RAPGEF3O95398 923 aa5.64□□□□□ -1.51
SQLE-204ENST00000520493 ZNF888P0CJ79 500 aaPredicted RBP5.64□□□□□ -1.51
SQLE-204ENST00000520493 SDHAP31040 664 aa5.64□□□□□ -1.51
SQLE-204ENST00000520493 IGFALSP35858 605 aa5.64□□□□□ -1.51
SQLE-204ENST00000520493 FLT3P36888 993 aa5.64□□□□□ -1.51
SQLE-204ENST00000520493 ADCY8P40145 1251 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms