RNA–Protein interactions for RNA: ENST00000520348.5

SNHG6-201, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 2 BASIC

Gene SNHG6, Length 648 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-201ENST00000520348 PDLIM7Q9NR12 457 aa17.76■□□□□ 0.43
SNHG6-201ENST00000520348 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.76■□□□□ 0.43
SNHG6-201ENST00000520348 TRAF3IP3Q9Y228 551 aa17.76■□□□□ 0.43
SNHG6-201ENST00000520348 ZKSCAN5Q9Y2L8 839 aa17.76■□□□□ 0.43
SNHG6-201ENST00000520348 IVNS1ABPQ9Y6Y0 642 aa17.76■□□□□ 0.43
SNHG6-201ENST00000520348 MCM3APO60318 1980 aa17.76■□□□□ 0.43
SNHG6-201ENST00000520348 TMEM88BA6NKF7 163 aa17.75■□□□□ 0.43
SNHG6-201ENST00000520348 TLR2O60603 784 aa17.75■□□□□ 0.43
SNHG6-201ENST00000520348 HIP1RO75146 1068 aa17.75■□□□□ 0.43
SNHG6-201ENST00000520348 GGPS1O95749 300 aa17.75■□□□□ 0.43
SNHG6-201ENST00000520348 PTMAP06454 111 aaKnown RBP17.75■□□□□ 0.43
SNHG6-201ENST00000520348 HOXC6P09630 235 aa17.75■□□□□ 0.43
SNHG6-201ENST00000520348 COPB1P53618 953 aaKnown RBP17.75■□□□□ 0.43
SNHG6-201ENST00000520348 PRKCEQ02156 737 aa17.75■□□□□ 0.43
SNHG6-201ENST00000520348 NFIL3Q16649 462 aa17.75■□□□□ 0.43
SNHG6-201ENST00000520348 CELF3Q5SZQ8 465 aaKnown RBP17.75■□□□□ 0.43
SNHG6-201ENST00000520348 SWSAP1Q6NVH7 229 aa17.75■□□□□ 0.43
SNHG6-201ENST00000520348 TAPT1Q6NXT6 567 aa17.75■□□□□ 0.43
SNHG6-201ENST00000520348 OTUD6AQ7L8S5 288 aa17.75■□□□□ 0.43
SNHG6-201ENST00000520348 ZSCAN30Q86W11 494 aa17.75■□□□□ 0.43
SNHG6-201ENST00000520348 FAM114A1Q8IWE2 563 aa17.75■□□□□ 0.43
SNHG6-201ENST00000520348 FBXO16Q8IX29 292 aaPredicted RBP17.75■□□□□ 0.43
SNHG6-201ENST00000520348 SPC24Q8NBT2 197 aa17.75■□□□□ 0.43
SNHG6-201ENST00000520348 SCFD2Q8WU76 684 aa17.75■□□□□ 0.43
SNHG6-201ENST00000520348 KCNN1Q92952 543 aa17.75■□□□□ 0.43
SNHG6-201ENST00000520348 TSG101Q99816 390 aa17.75■□□□□ 0.43
SNHG6-201ENST00000520348 ST6GALNAC4Q9H4F1 302 aa17.75■□□□□ 0.43
SNHG6-201ENST00000520348 FGFR1OPO95684 399 aaKnown RBP17.74■□□□□ 0.43
SNHG6-201ENST00000520348 ATP4AP20648 1035 aa17.74■□□□□ 0.43
SNHG6-201ENST00000520348 MARSP56192 900 aaKnown RBP17.74■□□□□ 0.43
SNHG6-201ENST00000520348 GSDMDP57764 484 aa17.74■□□□□ 0.43
SNHG6-201ENST00000520348 RTP1P59025 263 aa17.74■□□□□ 0.43
SNHG6-201ENST00000520348 TBX2Q13207 712 aaPredicted RBP17.74■□□□□ 0.43
SNHG6-201ENST00000520348 ALCAMQ13740 583 aa17.74■□□□□ 0.43
SNHG6-201ENST00000520348 TTLL4Q14679 1199 aa17.74■□□□□ 0.43
SNHG6-201ENST00000520348 HSP90AA4PQ58FG1 418 aa17.74■□□□□ 0.43
SNHG6-201ENST00000520348 CCDC186Q7Z3E2 898 aa17.74■□□□□ 0.43
SNHG6-201ENST00000520348 ANKRD20A12PQ8NF67 263 aa17.74■□□□□ 0.43
SNHG6-201ENST00000520348 SEPT1Q8WYJ6 367 aa17.74■□□□□ 0.43
SNHG6-201ENST00000520348 USP6NLQ92738 828 aa17.74■□□□□ 0.43
SNHG6-201ENST00000520348 EMID1Q96A84 441 aaPredicted RBP17.74■□□□□ 0.43
SNHG6-201ENST00000520348 MAML3Q96JK9 1138 aa17.74■□□□□ 0.43
SNHG6-201ENST00000520348 CEP63Q96MT8 703 aa17.74■□□□□ 0.43
SNHG6-201ENST00000520348 CEP89Q96ST8 783 aa17.74■□□□□ 0.43
SNHG6-201ENST00000520348 ZNF302Q9NR11 478 aa17.74■□□□□ 0.43
SNHG6-201ENST00000520348 NRBP1Q9UHY1 535 aa17.74■□□□□ 0.43
SNHG6-201ENST00000520348 CPA4Q9UI42 421 aa17.74■□□□□ 0.43
SNHG6-201ENST00000520348 PPME1Q9Y570 386 aa17.74■□□□□ 0.43
SNHG6-201ENST00000520348 ZMYM2Q9UBW7 1377 aa17.74■□□□□ 0.43
SNHG6-201ENST00000520348 ITIH6Q6UXX5 1313 aa17.73■□□□□ 0.43
SNHG6-201ENST00000520348 EMSYQ7Z589 1322 aa17.73■□□□□ 0.43
SNHG6-201ENST00000520348 PDXKO00764 312 aa17.73■□□□□ 0.43
SNHG6-201ENST00000520348 TOMM70O94826 608 aa17.73■□□□□ 0.43
SNHG6-201ENST00000520348 IGHA2P01877 340 aa17.73■□□□□ 0.43
SNHG6-201ENST00000520348 MYBP10242 640 aa17.73■□□□□ 0.43
SNHG6-201ENST00000520348 PLS3P13797 630 aa17.73■□□□□ 0.43
SNHG6-201ENST00000520348 PTGS1P23219 599 aa17.73■□□□□ 0.43
SNHG6-201ENST00000520348 FKBP3Q00688 224 aaKnown RBP17.73■□□□□ 0.43
SNHG6-201ENST00000520348 KNOP1Q1ED39 458 aaKnown RBP17.73■□□□□ 0.43
SNHG6-201ENST00000520348 XKR9Q5GH70 373 aa17.73■□□□□ 0.43
SNHG6-201ENST00000520348 PLA2G4FQ68DD2 849 aa17.73■□□□□ 0.43
SNHG6-201ENST00000520348 EEPD1Q7L9B9 569 aa17.73■□□□□ 0.43
SNHG6-201ENST00000520348 ZNF720Q7Z2F6 126 aa17.73■□□□□ 0.43
SNHG6-201ENST00000520348 DRC7Q8IY82 874 aa17.73■□□□□ 0.43
SNHG6-201ENST00000520348 TMEM174Q8WUU8 243 aa17.73■□□□□ 0.43
SNHG6-201ENST00000520348 CNOT6LQ96LI5 555 aaKnown RBP17.73■□□□□ 0.43
SNHG6-201ENST00000520348 DRC1Q96MC2 740 aa17.73■□□□□ 0.43
SNHG6-201ENST00000520348 GPR20Q99678 358 aa17.73■□□□□ 0.43
SNHG6-201ENST00000520348 NIFKQ9BYG3 293 aaKnown RBP17.73■□□□□ 0.43
SNHG6-201ENST00000520348 KCNF1Q9H3M0 494 aa17.73■□□□□ 0.43
SNHG6-201ENST00000520348 ZHX3Q9H4I2 956 aa17.73■□□□□ 0.43
SNHG6-201ENST00000520348 C17orf75Q9HAS0 396 aa17.73■□□□□ 0.43
SNHG6-201ENST00000520348 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.73■□□□□ 0.43
SNHG6-201ENST00000520348 TBC1D7Q9P0N9 293 aa17.73■□□□□ 0.43
SNHG6-201ENST00000520348 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.73■□□□□ 0.435e-16■■■□□ 14.8
SNHG6-201ENST00000520348 TMEM150BA6NC51 233 aa17.72■□□□□ 0.43
SNHG6-201ENST00000520348 LGALS16A8MUM7 142 aa17.72■□□□□ 0.43
SNHG6-201ENST00000520348 USO1O60763 962 aaKnown RBP17.72■□□□□ 0.43
SNHG6-201ENST00000520348 DGAT1O75907 488 aa17.72■□□□□ 0.43
SNHG6-201ENST00000520348 SNAI1O95863 264 aaPredicted RBP17.72■□□□□ 0.43
SNHG6-201ENST00000520348 OATP04181 439 aa17.72■□□□□ 0.43
SNHG6-201ENST00000520348 NPEPPSP55786 919 aa17.72■□□□□ 0.43
SNHG6-201ENST00000520348 TARBP2Q15633 366 aaKnown RBP17.72■□□□□ 0.43
SNHG6-201ENST00000520348 LY6KQ17RY6 165 aa17.72■□□□□ 0.43
SNHG6-201ENST00000520348 FILIP1LQ4L180 1135 aa17.72■□□□□ 0.43
SNHG6-201ENST00000520348 UTP14CQ5TAP6 766 aaKnown RBP17.72■□□□□ 0.43
SNHG6-201ENST00000520348 STXBP4Q6ZWJ1 553 aa17.72■□□□□ 0.43
SNHG6-201ENST00000520348 TMC6Q7Z403 805 aa17.72■□□□□ 0.43
SNHG6-201ENST00000520348 MYCT1Q8N699 235 aa17.72■□□□□ 0.43
SNHG6-201ENST00000520348 SLC17A8Q8NDX2 589 aa17.72■□□□□ 0.43
SNHG6-201ENST00000520348 MRPL44Q9H9J2 332 aaKnown RBP17.72■□□□□ 0.43
SNHG6-201ENST00000520348 ZFYVE28Q9HCC9 887 aa17.72■□□□□ 0.43
SNHG6-201ENST00000520348 XPNPEP1Q9NQW7 623 aa17.72■□□□□ 0.43
SNHG6-201ENST00000520348 CYP26B1Q9NR63 512 aa17.72■□□□□ 0.43
SNHG6-201ENST00000520348 TYW1Q9NV66 732 aaKnown RBP17.72■□□□□ 0.43
SNHG6-201ENST00000520348 LARSQ9P2J5 1176 aaKnown RBP17.72■□□□□ 0.43
SNHG6-201ENST00000520348 MYH9P35579 1960 aaKnown RBP17.71■□□□□ 0.43
SNHG6-201ENST00000520348 ESPNB1AK53 854 aa17.71■□□□□ 0.43
SNHG6-201ENST00000520348 TEX33O43247 280 aa17.71■□□□□ 0.43
SNHG6-201ENST00000520348 NCKAP1LP55160 1127 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms