RNA–Protein interactions for RNA: ENST00000520337.1

CTHRC1-203, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 1 (best) BASIC

Gene CTHRC1, Length 1,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-203ENST00000520337 PCDHA6Q9UN73 950 aa8.97□□□□□ -0.97
CTHRC1-203ENST00000520337 AFG3L2Q9Y4W6 797 aa8.97□□□□□ -0.97
CTHRC1-203ENST00000520337 PCDHA8Q9Y5H6 950 aa8.97□□□□□ -0.97
CTHRC1-203ENST00000520337 ZHX2Q9Y6X8 837 aa8.97□□□□□ -0.97
CTHRC1-203ENST00000520337 SMCO2A6NFE2 343 aa8.96□□□□□ -0.98
CTHRC1-203ENST00000520337 WDR46O15213 610 aaKnown RBP8.96□□□□□ -0.98
CTHRC1-203ENST00000520337 KIF4AO95239 1232 aa8.96□□□□□ -0.98
CTHRC1-203ENST00000520337 YEATS4O95619 227 aa8.96□□□□□ -0.98
CTHRC1-203ENST00000520337 SCNN1AP37088 669 aa8.96□□□□□ -0.98
CTHRC1-203ENST00000520337 STAT2P52630 851 aa8.96□□□□□ -0.98
CTHRC1-203ENST00000520337 UBE2HP62256 183 aa8.96□□□□□ -0.98
CTHRC1-203ENST00000520337 GNL2Q13823 731 aaKnown RBP8.96□□□□□ -0.98
CTHRC1-203ENST00000520337 SLC39A14Q15043 492 aa8.96□□□□□ -0.98
CTHRC1-203ENST00000520337 SF3A1Q15459 793 aaKnown RBP8.96□□□□□ -0.98
CTHRC1-203ENST00000520337 KLHL40Q2TBA0 621 aa8.96□□□□□ -0.98
CTHRC1-203ENST00000520337 RILPL1Q5EBL4 403 aa8.96□□□□□ -0.98
CTHRC1-203ENST00000520337 MAP1SQ66K74 1059 aaPredicted RBP8.96□□□□□ -0.98
CTHRC1-203ENST00000520337 FAM160B2Q86V87 743 aa8.96□□□□□ -0.98
CTHRC1-203ENST00000520337 RETREG2Q8NC44 543 aa8.96□□□□□ -0.98
CTHRC1-203ENST00000520337 RASGRP4Q8TDF6 673 aa8.96□□□□□ -0.98
CTHRC1-203ENST00000520337 CCDC12Q8WUD4 166 aaPredicted RBP8.96□□□□□ -0.98
CTHRC1-203ENST00000520337 CHURC1Q8WUH1 139 aa8.96□□□□□ -0.98
CTHRC1-203ENST00000520337 C12orf42Q96LP6 360 aa8.96□□□□□ -0.98
CTHRC1-203ENST00000520337 MRPL18Q9H0U6 180 aaKnown RBP8.96□□□□□ -0.98
CTHRC1-203ENST00000520337 RANBP17Q9H2T7 1088 aaKnown RBP8.96□□□□□ -0.98
CTHRC1-203ENST00000520337 AS3MTQ9HBK9 375 aa8.96□□□□□ -0.98
CTHRC1-203ENST00000520337 BRMS1Q9HCU9 246 aa8.96□□□□□ -0.98
CTHRC1-203ENST00000520337 FEM1BQ9UK73 627 aa8.96□□□□□ -0.98
CTHRC1-203ENST00000520337 TRIM75PA6NK02 468 aa8.95□□□□□ -0.98
CTHRC1-203ENST00000520337 C19orf81C9J6K1 198 aa8.95□□□□□ -0.98
CTHRC1-203ENST00000520337 TRAF5O00463 557 aa8.95□□□□□ -0.98
CTHRC1-203ENST00000520337 SMNDC1O75940 238 aaKnown RBP eCLIP8.95□□□□□ -0.98
CTHRC1-203ENST00000520337 PCSK2P16519 638 aa8.95□□□□□ -0.98
CTHRC1-203ENST00000520337 VCAM1P19320 739 aa8.95□□□□□ -0.98
CTHRC1-203ENST00000520337 GNA11P29992 359 aa8.95□□□□□ -0.98
CTHRC1-203ENST00000520337 NF2P35240 595 aa8.95□□□□□ -0.98
CTHRC1-203ENST00000520337 IREB2P48200 963 aaKnown RBP8.95□□□□□ -0.98
CTHRC1-203ENST00000520337 USP14P54578 494 aa8.95□□□□□ -0.98
CTHRC1-203ENST00000520337 FMR1Q06787 632 aaKnown RBP eCLIP8.95□□□□□ -0.98
CTHRC1-203ENST00000520337 PRSS36Q5K4E3 855 aa8.95□□□□□ -0.98
CTHRC1-203ENST00000520337 LDLRAD1Q5T700 205 aa8.95□□□□□ -0.98
CTHRC1-203ENST00000520337 PIK3AP1Q6ZUJ8 805 aa8.95□□□□□ -0.98
CTHRC1-203ENST00000520337 TMEM130Q8N3G9 435 aa8.95□□□□□ -0.98
CTHRC1-203ENST00000520337 CLMNQ96JQ2 1002 aa8.95□□□□□ -0.98
CTHRC1-203ENST00000520337 AMNQ9BXJ7 453 aa8.95□□□□□ -0.98
CTHRC1-203ENST00000520337 C6orf50Q9HD87 102 aa8.95□□□□□ -0.98
CTHRC1-203ENST00000520337 NMRK2Q9NPI5 230 aa8.95□□□□□ -0.98
CTHRC1-203ENST00000520337 RIC8AQ9NPQ8 531 aa8.95□□□□□ -0.98
CTHRC1-203ENST00000520337 TRIM33Q9UPN9 1127 aa8.95□□□□□ -0.98
CTHRC1-203ENST00000520337 PCDHB6Q9Y5E3 794 aa8.95□□□□□ -0.98
CTHRC1-203ENST00000520337 PCDHA1Q9Y5I3 950 aa8.95□□□□□ -0.98
CTHRC1-203ENST00000520337 DDX49Q9Y6V7 483 aaKnown RBP8.95□□□□□ -0.98
CTHRC1-203ENST00000520337 RBBP6Q7Z6E9 1792 aaKnown RBP8.94□□□□□ -0.98
CTHRC1-203ENST00000520337 ZNFX1Q9P2E3 1918 aaKnown RBP8.94□□□□□ -0.98
CTHRC1-203ENST00000520337 SPTLC2O15270 562 aa8.94□□□□□ -0.98
CTHRC1-203ENST00000520337 EDIL3O43854 480 aa8.94□□□□□ -0.98
CTHRC1-203ENST00000520337 MBD3O95983 291 aa8.94□□□□□ -0.98
CTHRC1-203ENST00000520337 TAL1P17542 331 aaPredicted RBP8.94□□□□□ -0.98
CTHRC1-203ENST00000520337 NOS3P29474 1203 aa8.94□□□□□ -0.98
CTHRC1-203ENST00000520337 TRAPPC10P48553 1259 aa8.94□□□□□ -0.98
CTHRC1-203ENST00000520337 ADCY7P51828 1080 aa8.94□□□□□ -0.98
CTHRC1-203ENST00000520337 HMGCS2P54868 508 aa8.94□□□□□ -0.98
CTHRC1-203ENST00000520337 IKQ13123 557 aaPredicted RBP8.94□□□□□ -0.98
CTHRC1-203ENST00000520337 STK38Q15208 465 aa8.94□□□□□ -0.98
CTHRC1-203ENST00000520337 AXDND1Q5T1B0 1012 aaPredicted RBP8.94□□□□□ -0.98
CTHRC1-203ENST00000520337 LCE3BQ5TA77 95 aa8.94□□□□□ -0.98
CTHRC1-203ENST00000520337 XKR5Q6UX68 686 aa8.94□□□□□ -0.98
CTHRC1-203ENST00000520337 LDHDQ86WU2 507 aa8.94□□□□□ -0.98
CTHRC1-203ENST00000520337 ANKRD13AQ8IZ07 590 aa8.94□□□□□ -0.98
CTHRC1-203ENST00000520337 KCNG4Q8TDN1 519 aa8.94□□□□□ -0.98
CTHRC1-203ENST00000520337 SLF1Q9BQI6 1058 aa8.94□□□□□ -0.98
CTHRC1-203ENST00000520337 RPAP3Q9H6T3 665 aaPredicted RBP8.94□□□□□ -0.98
CTHRC1-203ENST00000520337 ELP3Q9H9T3 547 aa8.94□□□□□ -0.98
CTHRC1-203ENST00000520337 TMEM260Q9NX78 707 aa8.94□□□□□ -0.98
CTHRC1-203ENST00000520337 BIN2Q9UBW5 565 aaPredicted RBP8.94□□□□□ -0.98
CTHRC1-203ENST00000520337 PCDHA7Q9UN72 937 aa8.94□□□□□ -0.98
CTHRC1-203ENST00000520337 PPME1Q9Y570 386 aa8.94□□□□□ -0.98
CTHRC1-203ENST00000520337 CSADQ9Y600 493 aa8.94□□□□□ -0.98
CTHRC1-203ENST00000520337 MORC2Q9Y6X9 1032 aaPredicted RBP8.94□□□□□ -0.98
CTHRC1-203ENST00000520337 ZNF536O15090 1300 aa8.94□□□□□ -0.98
CTHRC1-203ENST00000520337 TMEM88BA6NKF7 163 aa8.93□□□□□ -0.98
CTHRC1-203ENST00000520337 MEIS2O14770 477 aa8.93□□□□□ -0.98
CTHRC1-203ENST00000520337 PPP6R2O75170 966 aa8.93□□□□□ -0.98
CTHRC1-203ENST00000520337 LIG1P18858 919 aa8.93□□□□□ -0.98
CTHRC1-203ENST00000520337 ATP2B1P20020 1258 aa8.93□□□□□ -0.98
CTHRC1-203ENST00000520337 MARCKSP29966 332 aaPredicted RBP8.93□□□□□ -0.98
CTHRC1-203ENST00000520337 MRPL12P52815 198 aaKnown RBP8.93□□□□□ -0.98
CTHRC1-203ENST00000520337 PPATQ06203 517 aa8.93□□□□□ -0.98
CTHRC1-203ENST00000520337 SETDB1Q15047 1291 aa8.93□□□□□ -0.98
CTHRC1-203ENST00000520337 ZNF174Q15697 407 aa8.93□□□□□ -0.98
CTHRC1-203ENST00000520337 TTC38Q5R3I4 469 aa8.93□□□□□ -0.98
CTHRC1-203ENST00000520337 COL13A1Q5TAT6 717 aaPredicted RBP8.93□□□□□ -0.98
CTHRC1-203ENST00000520337 JAKMIP3Q5VZ66 844 aa8.93□□□□□ -0.98
CTHRC1-203ENST00000520337 ADALQ6DHV7 355 aa8.93□□□□□ -0.98
CTHRC1-203ENST00000520337 ARMC9Q7Z3E5 817 aa8.93□□□□□ -0.98
CTHRC1-203ENST00000520337 ZNF438Q7Z4V0 828 aa8.93□□□□□ -0.98
CTHRC1-203ENST00000520337 ERO1BQ86YB8 467 aa8.93□□□□□ -0.98
CTHRC1-203ENST00000520337 REXO1Q8N1G1 1221 aaKnown RBP8.93□□□□□ -0.98
CTHRC1-203ENST00000520337 C4orf32Q8N8J7 132 aa8.93□□□□□ -0.98
CTHRC1-203ENST00000520337 PRPF38AQ8NAV1 312 aaKnown RBP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms