RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-208ENST00000520228 GSTA4O15217 222 aa9.27□□□□□ -0.93
SDCBP-208ENST00000520228 PEX10O60683 326 aa9.27□□□□□ -0.93
SDCBP-208ENST00000520228 ZBTB7AO95365 584 aa9.27□□□□□ -0.93
SDCBP-208ENST00000520228 GNAT1P11488 350 aa9.27□□□□□ -0.93
SDCBP-208ENST00000520228 VIPR1P32241 457 aa9.27□□□□□ -0.93
SDCBP-208ENST00000520228 FAM47CQ5HY64 1035 aa9.27□□□□□ -0.93
SDCBP-208ENST00000520228 ZC3H14Q6PJT7 736 aaKnown RBP9.27□□□□□ -0.93
SDCBP-208ENST00000520228 OVCH1Q7RTY7 1134 aa9.27□□□□□ -0.93
SDCBP-208ENST00000520228 THNSL2Q86YJ6 484 aa9.27□□□□□ -0.93
SDCBP-208ENST00000520228 IGSF22Q8N9C0 903 aa9.27□□□□□ -0.93
SDCBP-208ENST00000520228 ORAI3Q9BRQ5 295 aa9.27□□□□□ -0.93
SDCBP-208ENST00000520228 PDGFDQ9GZP0 370 aaPredicted RBP9.27□□□□□ -0.93
SDCBP-208ENST00000520228 MTFR1LQ9H019 292 aa9.27□□□□□ -0.93
SDCBP-208ENST00000520228 AP5M1Q9H0R1 490 aa9.27□□□□□ -0.93
SDCBP-208ENST00000520228 NSUN3Q9H649 340 aaKnown RBP9.27□□□□□ -0.93
SDCBP-208ENST00000520228 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.27□□□□□ -0.93
SDCBP-208ENST00000520228 PRKAB1Q9Y478 270 aa9.27□□□□□ -0.93
SDCBP-208ENST00000520228 BCL9LQ86UU0 1499 aa9.27□□□□□ -0.93
SDCBP-208ENST00000520228 TOPAZ1Q8N9V7 1692 aa9.26□□□□□ -0.93
SDCBP-208ENST00000520228 KIAA0232Q92628 1395 aa9.26□□□□□ -0.93
SDCBP-208ENST00000520228 ZNF561-AS1K7EIQ3 104 aa9.26□□□□□ -0.93
SDCBP-208ENST00000520228 AMY2AP04746 511 aa9.26□□□□□ -0.93
SDCBP-208ENST00000520228 APPP05067 770 aa9.26□□□□□ -0.93
SDCBP-208ENST00000520228 JMJD7P0C870 316 aa9.26□□□□□ -0.93
SDCBP-208ENST00000520228 PDE6AP16499 860 aa9.26□□□□□ -0.93
SDCBP-208ENST00000520228 AMY2BP19961 511 aa9.26□□□□□ -0.93
SDCBP-208ENST00000520228 FBLN1P23142 703 aa9.26□□□□□ -0.93
SDCBP-208ENST00000520228 ST5P78524 1137 aa9.26□□□□□ -0.93
SDCBP-208ENST00000520228 SLC9A5Q14940 896 aa9.26□□□□□ -0.93
SDCBP-208ENST00000520228 ZNF605Q86T29 641 aa9.26□□□□□ -0.93
SDCBP-208ENST00000520228 NME9Q86XW9 330 aa9.26□□□□□ -0.93
SDCBP-208ENST00000520228 DIRC2Q96SL1 478 aa9.26□□□□□ -0.93
SDCBP-208ENST00000520228 POLR3GLQ9BT43 218 aa9.26□□□□□ -0.93
SDCBP-208ENST00000520228 SMOC1Q9H4F8 434 aa9.26□□□□□ -0.93
SDCBP-208ENST00000520228 KCNK12Q9HB15 430 aa9.26□□□□□ -0.93
SDCBP-208ENST00000520228 CATSPERZQ9NTU4 200 aa9.26□□□□□ -0.93
SDCBP-208ENST00000520228 SAMD15Q9P1V8 674 aa9.26□□□□□ -0.93
SDCBP-208ENST00000520228 PALD1Q9ULE6 856 aa9.26□□□□□ -0.93
SDCBP-208ENST00000520228 SLIT2O94813 1529 aa9.26□□□□□ -0.93
SDCBP-208ENST00000520228 A0A1W2PP64 1363 aa9.25□□□□□ -0.93
SDCBP-208ENST00000520228 ITSN1Q15811 1721 aa9.25□□□□□ -0.93
SDCBP-208ENST00000520228 TRPM3Q9HCF6 1732 aaPredicted RBP9.25□□□□□ -0.93
SDCBP-208ENST00000520228 ATRNO75882 1429 aa9.25□□□□□ -0.93
SDCBP-208ENST00000520228 LRRC10BA6NIK2 292 aa9.25□□□□□ -0.93
SDCBP-208ENST00000520228 KRIT1O00522 736 aa9.25□□□□□ -0.93
SDCBP-208ENST00000520228 GLRX3O76003 335 aaKnown RBP9.25□□□□□ -0.93
SDCBP-208ENST00000520228 DNM2P50570 870 aa9.25□□□□□ -0.93
SDCBP-208ENST00000520228 MECP2P51608 486 aaKnown RBP9.25□□□□□ -0.93
SDCBP-208ENST00000520228 GPR19Q15760 415 aa9.25□□□□□ -0.93
SDCBP-208ENST00000520228 VPS72Q15906 364 aa9.25□□□□□ -0.93
SDCBP-208ENST00000520228 MLANAQ16655 118 aa9.25□□□□□ -0.93
SDCBP-208ENST00000520228 CDCA2Q69YH5 1023 aaPredicted RBP9.25□□□□□ -0.93
SDCBP-208ENST00000520228 DDX53Q86TM3 631 aaKnown RBP9.25□□□□□ -0.93
SDCBP-208ENST00000520228 OSTM1Q86WC4 334 aa9.25□□□□□ -0.93
SDCBP-208ENST00000520228 KCNH5Q8NCM2 988 aa9.25□□□□□ -0.93
SDCBP-208ENST00000520228 MCOLN1Q9GZU1 580 aa9.25□□□□□ -0.93
SDCBP-208ENST00000520228 EPB41L4BQ9H329 900 aa9.25□□□□□ -0.93
SDCBP-208ENST00000520228 TMX1Q9H3N1 280 aa9.25□□□□□ -0.93
SDCBP-208ENST00000520228 SMURF1Q9HCE7 757 aa9.25□□□□□ -0.93
SDCBP-208ENST00000520228 DCP1AQ9NPI6 582 aaPredicted RBP9.25□□□□□ -0.93
SDCBP-208ENST00000520228 DBR1Q9UK59 544 aaKnown RBP9.25□□□□□ -0.93
SDCBP-208ENST00000520228 PLA2G2DQ9UNK4 145 aa9.25□□□□□ -0.93
SDCBP-208ENST00000520228 CD163L1Q9NR16 1453 aa9.25□□□□□ -0.93
SDCBP-208ENST00000520228 IRS2Q9Y4H2 1338 aa9.25□□□□□ -0.93
SDCBP-208ENST00000520228 CPDO75976 1380 aa9.24□□□□□ -0.93
SDCBP-208ENST00000520228 EDC4Q6P2E9 1401 aaKnown RBP9.24□□□□□ -0.93
SDCBP-208ENST00000520228 TCRBV5S2A0A599 114 aa9.24□□□□□ -0.93
SDCBP-208ENST00000520228 PDE8AO60658 829 aa9.24□□□□□ -0.93
SDCBP-208ENST00000520228 VIL1P09327 827 aaKnown RBP9.24□□□□□ -0.93
SDCBP-208ENST00000520228 MYCLP1P12525 358 aaPredicted RBP9.24□□□□□ -0.93
SDCBP-208ENST00000520228 FLT3P36888 993 aa9.24□□□□□ -0.93
SDCBP-208ENST00000520228 EVA1CP58658 441 aa9.24□□□□□ -0.93
SDCBP-208ENST00000520228 CRY1Q16526 586 aa9.24□□□□□ -0.93
SDCBP-208ENST00000520228 TMEM177Q53S58 311 aa9.24□□□□□ -0.93
SDCBP-208ENST00000520228 OLFML2BQ68BL8 750 aa9.24□□□□□ -0.93
SDCBP-208ENST00000520228 CNNM4Q6P4Q7 775 aa9.24□□□□□ -0.93
SDCBP-208ENST00000520228 TMC6Q7Z403 805 aa9.24□□□□□ -0.93
SDCBP-208ENST00000520228 MILR1Q7Z6M3 343 aa9.24□□□□□ -0.93
SDCBP-208ENST00000520228 PHOSPHO1Q8TCT1 267 aa9.24□□□□□ -0.93
SDCBP-208ENST00000520228 PANK1Q8TE04 598 aa9.24□□□□□ -0.93
SDCBP-208ENST00000520228 ASH2LQ9UBL3 628 aa9.24□□□□□ -0.93
SDCBP-208ENST00000520228 DSEQ9UL01 958 aa9.24□□□□□ -0.93
SDCBP-208ENST00000520228 MAPRE3Q9UPY8 281 aa9.24□□□□□ -0.93
SDCBP-208ENST00000520228 ANKRD36BQ8N2N9 1353 aa9.24□□□□□ -0.93
SDCBP-208ENST00000520228 MAFKO60675 156 aa9.23□□□□□ -0.93
SDCBP-208ENST00000520228 EPHA5P54756 1037 aa9.23□□□□□ -0.93
SDCBP-208ENST00000520228 JAM2P57087 298 aa9.23□□□□□ -0.93
SDCBP-208ENST00000520228 CFAP100Q494V2 611 aa9.23□□□□□ -0.93
SDCBP-208ENST00000520228 PIK3R6Q5UE93 754 aa9.23□□□□□ -0.93
SDCBP-208ENST00000520228 ARHGAP36Q6ZRI8 547 aa9.23□□□□□ -0.93
SDCBP-208ENST00000520228 UBE2R2Q712K3 238 aaPredicted RBP9.23□□□□□ -0.93
SDCBP-208ENST00000520228 RNF180Q86T96 592 aa9.23□□□□□ -0.93
SDCBP-208ENST00000520228 PPM1KQ8N3J5 372 aa9.23□□□□□ -0.93
SDCBP-208ENST00000520228 CISD2Q8N5K1 135 aaKnown RBP9.23□□□□□ -0.93
SDCBP-208ENST00000520228 MYOTQ9UBF9 498 aa9.23□□□□□ -0.93
SDCBP-208ENST00000520228 MBD1Q9UIS9 605 aaPredicted RBP9.23□□□□□ -0.93
SDCBP-208ENST00000520228 TELO2Q9Y4R8 837 aa9.23□□□□□ -0.93
SDCBP-208ENST00000520228 PCDHB4Q9Y5E5 795 aa9.23□□□□□ -0.93
SDCBP-208ENST00000520228 ALS2Q96Q42 1657 aa9.23□□□□□ -0.93
SDCBP-208ENST00000520228 TEX51A0A1B0GUA7 166 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms