RNA–Protein interactions for RNA: ENST00000519132.5

CLK4-202, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,129 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-202ENST00000519132 TMEM253P0C7T8 217 aa8.46□□□□□ -1.06
CLK4-202ENST00000519132 PRIM2P49643 509 aa8.46□□□□□ -1.06
CLK4-202ENST00000519132 ZKSCAN2Q63HK3 967 aa8.46□□□□□ -1.06
CLK4-202ENST00000519132 LDHAL6AQ6ZMR3 332 aa8.46□□□□□ -1.06
CLK4-202ENST00000519132 EP400NLQ6ZTU2 488 aa8.46□□□□□ -1.06
CLK4-202ENST00000519132 RNF166Q96A37 237 aaPredicted RBP8.46□□□□□ -1.06
CLK4-202ENST00000519132 CDC5LQ99459 802 aaKnown RBP8.46□□□□□ -1.06
CLK4-202ENST00000519132 A0A087WZG4 1122 aa8.45□□□□□ -1.06
CLK4-202ENST00000519132 CCDC66A2RUB6 948 aa8.45□□□□□ -1.06
CLK4-202ENST00000519132 LRRC10BA6NIK2 292 aa8.45□□□□□ -1.06
CLK4-202ENST00000519132 ITGA4P13612 1032 aa8.45□□□□□ -1.06
CLK4-202ENST00000519132 ABCB4P21439 1286 aa8.45□□□□□ -1.06
CLK4-202ENST00000519132 SRSF2Q01130 221 aaKnown RBP8.45□□□□□ -1.06
CLK4-202ENST00000519132 MAP4K2Q12851 820 aa8.45□□□□□ -1.06
CLK4-202ENST00000519132 LILRA6Q6PI73 481 aa8.45□□□□□ -1.06
CLK4-202ENST00000519132 DIS3LQ8TF46 1054 aaKnown RBP8.45□□□□□ -1.06
CLK4-202ENST00000519132 VWCEQ96DN2 955 aa8.45□□□□□ -1.06
CLK4-202ENST00000519132 KCNJ15Q99712 375 aa8.45□□□□□ -1.06
CLK4-202ENST00000519132 STARD13Q9Y3M8 1113 aa8.45□□□□□ -1.06
CLK4-202ENST00000519132 IGSF1Q8N6C5 1336 aa8.45□□□□□ -1.06
CLK4-202ENST00000519132 FAM177BA6PVY3 158 aa8.45□□□□□ -1.06
CLK4-202ENST00000519132 PQBP1O60828 265 aaKnown RBP8.45□□□□□ -1.06
CLK4-202ENST00000519132 KIAA0753Q2KHM9 967 aa8.45□□□□□ -1.06
CLK4-202ENST00000519132 C1orf131Q8NDD1 294 aaKnown RBP8.45□□□□□ -1.06
CLK4-202ENST00000519132 RCC1LQ96I51 464 aaKnown RBP8.45□□□□□ -1.06
CLK4-202ENST00000519132 SEMA4AQ9H3S1 761 aa8.45□□□□□ -1.06
CLK4-202ENST00000519132 TUBD1Q9UJT1 453 aa8.45□□□□□ -1.06
CLK4-202ENST00000519132 FRMD4BQ9Y2L6 1034 aa8.45□□□□□ -1.06
CLK4-202ENST00000519132 SLC4A7Q9Y6M7 1214 aa8.45□□□□□ -1.06
CLK4-202ENST00000519132 COL14A1Q05707 1796 aaKnown RBP8.45□□□□□ -1.06
CLK4-202ENST00000519132 GOLGA8AA7E2F4 631 aa8.45□□□□□ -1.06
CLK4-202ENST00000519132 GOLGA8BA8MQT2 603 aa8.45□□□□□ -1.06
CLK4-202ENST00000519132 RGS9O75916 674 aaPredicted RBP8.45□□□□□ -1.06
CLK4-202ENST00000519132 CLEC2LP0C7M8 214 aa8.45□□□□□ -1.06
CLK4-202ENST00000519132 C5AR1P21730 350 aa8.45□□□□□ -1.06
CLK4-202ENST00000519132 MAPRE1Q15691 268 aaKnown RBP8.45□□□□□ -1.06
CLK4-202ENST00000519132 SIRT2Q8IXJ6 389 aa8.45□□□□□ -1.06
CLK4-202ENST00000519132 CHST14Q8NCH0 376 aa8.45□□□□□ -1.06
CLK4-202ENST00000519132 DDX54Q8TDD1 881 aaKnown RBP8.45□□□□□ -1.06
CLK4-202ENST00000519132 HDAC9Q9UKV0 1011 aa8.45□□□□□ -1.06
CLK4-202ENST00000519132 SPEF1Q9Y4P9 236 aa8.45□□□□□ -1.06
CLK4-202ENST00000519132 DGKBQ9Y6T7 804 aa8.45□□□□□ -1.06
CLK4-202ENST00000519132 SCINQ9Y6U3 715 aa8.45□□□□□ -1.06
CLK4-202ENST00000519132 ZNF521Q96K83 1311 aa8.44□□□□□ -1.06
CLK4-202ENST00000519132 PLEKHG2Q9H7P9 1386 aa8.44□□□□□ -1.06
CLK4-202ENST00000519132 ARVCFO00192 962 aa8.44□□□□□ -1.06
CLK4-202ENST00000519132 NCK2O43639 380 aa8.44□□□□□ -1.06
CLK4-202ENST00000519132 RNASEH2AO75792 299 aaKnown RBP8.44□□□□□ -1.06
CLK4-202ENST00000519132 PYGLP06737 847 aa8.44□□□□□ -1.06
CLK4-202ENST00000519132 BMP4P12644 408 aa8.44□□□□□ -1.06
CLK4-202ENST00000519132 LSSP48449 732 aa8.44□□□□□ -1.06
CLK4-202ENST00000519132 MECP2P51608 486 aaKnown RBP8.44□□□□□ -1.06
CLK4-202ENST00000519132 CACTIN-AS1Q8N1I8 211 aa8.44□□□□□ -1.06
CLK4-202ENST00000519132 AIFM3Q96NN9 605 aa8.44□□□□□ -1.06
CLK4-202ENST00000519132 IPPKQ9H8X2 491 aa8.44□□□□□ -1.06
CLK4-202ENST00000519132 RAD18Q9NS91 495 aa8.44□□□□□ -1.06
CLK4-202ENST00000519132 RBM28Q9NW13 759 aaKnown RBP8.44□□□□□ -1.06
CLK4-202ENST00000519132 IPO8O15397 1037 aaKnown RBP8.44□□□□□ -1.06
CLK4-202ENST00000519132 ALDH2P05091 517 aa8.44□□□□□ -1.06
CLK4-202ENST00000519132 ITGA6P23229 1130 aa8.44□□□□□ -1.06
CLK4-202ENST00000519132 CTSKP43235 329 aa8.44□□□□□ -1.06
CLK4-202ENST00000519132 MAPK9P45984 424 aa8.44□□□□□ -1.06
CLK4-202ENST00000519132 TMEM240Q5SV17 173 aa8.44□□□□□ -1.06
CLK4-202ENST00000519132 CCDC70Q6NSX1 233 aa8.44□□□□□ -1.06
CLK4-202ENST00000519132 CHST15Q7LFX5 561 aaPredicted RBP8.44□□□□□ -1.06
CLK4-202ENST00000519132 CAMKK1Q8N5S9 505 aa8.44□□□□□ -1.06
CLK4-202ENST00000519132 PDILTQ8N807 584 aa8.44□□□□□ -1.06
CLK4-202ENST00000519132 TNFRSF25Q93038 417 aa8.44□□□□□ -1.06
CLK4-202ENST00000519132 KREMEN1Q96MU8 473 aa8.44□□□□□ -1.06
CLK4-202ENST00000519132 HERPUD2Q9BSE4 406 aa8.44□□□□□ -1.06
CLK4-202ENST00000519132 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.44□□□□□ -1.06
CLK4-202ENST00000519132 RRN3Q9NYV6 651 aa8.44□□□□□ -1.06
CLK4-202ENST00000519132 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.43□□□□□ -1.06
CLK4-202ENST00000519132 KLHL33A6NCF5 533 aa8.43□□□□□ -1.06
CLK4-202ENST00000519132 EXOC5O00471 708 aa8.43□□□□□ -1.06
CLK4-202ENST00000519132 DVL2O14641 736 aa8.43□□□□□ -1.06
CLK4-202ENST00000519132 SIN3BO75182 1162 aa8.43□□□□□ -1.06
CLK4-202ENST00000519132 NAT2P11245 290 aa8.43□□□□□ -1.06
CLK4-202ENST00000519132 AK2P54819 239 aa8.43□□□□□ -1.06
CLK4-202ENST00000519132 ERVK-24P63145 666 aa8.43□□□□□ -1.06
CLK4-202ENST00000519132 PIP4K2BP78356 416 aa8.43□□□□□ -1.06
CLK4-202ENST00000519132 CPZQ66K79 652 aa8.43□□□□□ -1.06
CLK4-202ENST00000519132 POMZP3Q6PJE2 187 aa8.43□□□□□ -1.06
CLK4-202ENST00000519132 OVCH1Q7RTY7 1134 aa8.43□□□□□ -1.06
CLK4-202ENST00000519132 MAATS1Q7Z4T9 603 aa8.43□□□□□ -1.06
CLK4-202ENST00000519132 ZNF354CQ86Y25 554 aa8.43□□□□□ -1.06
CLK4-202ENST00000519132 PTRH1Q86Y79 214 aaKnown RBP8.43□□□□□ -1.06
CLK4-202ENST00000519132 TMEM169Q96HH4 297 aa8.43□□□□□ -1.06
CLK4-202ENST00000519132 CLEC1BQ9P126 229 aa8.43□□□□□ -1.06
CLK4-202ENST00000519132 GTF2A1LQ9UNN4 478 aa8.43□□□□□ -1.06
CLK4-202ENST00000519132 SHISA3A0PJX4 238 aa8.43□□□□□ -1.06
CLK4-202ENST00000519132 ZBTB48P10074 688 aaPredicted RBP8.43□□□□□ -1.06
CLK4-202ENST00000519132 PHKG2P15735 406 aa8.43□□□□□ -1.06
CLK4-202ENST00000519132 ALFQ53S48 1182 aa8.43□□□□□ -1.06
CLK4-202ENST00000519132 TEX19Q8NA77 164 aa8.43□□□□□ -1.06
CLK4-202ENST00000519132 CCDC138Q96M89 665 aa8.43□□□□□ -1.06
CLK4-202ENST00000519132 MYD88Q99836 296 aa8.43□□□□□ -1.06
CLK4-202ENST00000519132 CRIM1Q9NZV1 1036 aa8.43□□□□□ -1.06
CLK4-202ENST00000519132 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.43□□□□□ -1.06
CLK4-202ENST00000519132 LETM1O95202 739 aaPredicted RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms