RNA–Protein interactions for RNA: ENST00000518910.5

CTNNA1-211, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-211ENST00000518910 CCDC155Q8N6L0 562 aa13.73□□□□□ -0.21
CTNNA1-211ENST00000518910 SNX29Q8TEQ0 813 aa13.73□□□□□ -0.21
CTNNA1-211ENST00000518910 SCLT1Q96NL6 688 aa13.73□□□□□ -0.21
CTNNA1-211ENST00000518910 USP28Q96RU2 1077 aa13.73□□□□□ -0.21
CTNNA1-211ENST00000518910 NRBP2Q9NSY0 501 aa13.73□□□□□ -0.21
CTNNA1-211ENST00000518910 LRWD1Q9UFC0 647 aa13.73□□□□□ -0.21
CTNNA1-211ENST00000518910 AKT3Q9Y243 479 aa13.73□□□□□ -0.21
CTNNA1-211ENST00000518910 ZBBXA8MT70 800 aa13.72□□□□□ -0.21
CTNNA1-211ENST00000518910 ZBTB42B2RXF5 422 aa13.72□□□□□ -0.21
CTNNA1-211ENST00000518910 ATP2C1P98194 919 aaPredicted RBP13.72□□□□□ -0.21
CTNNA1-211ENST00000518910 TRIM71Q2Q1W2 868 aaKnown RBP13.72□□□□□ -0.21
CTNNA1-211ENST00000518910 OTOP2Q7RTS6 562 aa13.72□□□□□ -0.21
CTNNA1-211ENST00000518910 RDM1Q8NG50 284 aa13.72□□□□□ -0.21
CTNNA1-211ENST00000518910 RASSF8Q8NHQ8 419 aa13.72□□□□□ -0.21
CTNNA1-211ENST00000518910 BBXQ8WY36 941 aaPredicted RBP13.72□□□□□ -0.21
CTNNA1-211ENST00000518910 FAM167AQ96KS9 214 aa13.72□□□□□ -0.21
CTNNA1-211ENST00000518910 CEP170P1Q96L14 293 aa13.72□□□□□ -0.21
CTNNA1-211ENST00000518910 CLIC6Q96NY7 704 aa13.72□□□□□ -0.21
CTNNA1-211ENST00000518910 POLD4Q9HCU8 107 aa13.72□□□□□ -0.21
CTNNA1-211ENST00000518910 RRN3P2A6NIE6 340 aa13.71□□□□□ -0.21
CTNNA1-211ENST00000518910 SLITRK3O94933 977 aa13.71□□□□□ -0.21
CTNNA1-211ENST00000518910 STBD1O95210 358 aa13.71□□□□□ -0.21
CTNNA1-211ENST00000518910 C22orf31O95567 290 aa13.71□□□□□ -0.21
CTNNA1-211ENST00000518910 SSBP05455 408 aaKnown RBP eCLIP13.71□□□□□ -0.21
CTNNA1-211ENST00000518910 IQCF3P0C7M6 154 aa13.71□□□□□ -0.21
CTNNA1-211ENST00000518910 GHRP10912 638 aa13.71□□□□□ -0.21
CTNNA1-211ENST00000518910 SELPP16109 830 aa13.71□□□□□ -0.21
CTNNA1-211ENST00000518910 YWHABP31946 246 aaKnown RBP13.71□□□□□ -0.21
CTNNA1-211ENST00000518910 SLC26A2P50443 739 aa13.71□□□□□ -0.21
CTNNA1-211ENST00000518910 TBC1D8BQ0IIM8 1120 aa13.71□□□□□ -0.21
CTNNA1-211ENST00000518910 DRP2Q13474 957 aa13.71□□□□□ -0.21
CTNNA1-211ENST00000518910 STK38Q15208 465 aa13.71□□□□□ -0.21
CTNNA1-211ENST00000518910 SHHQ15465 462 aa13.71□□□□□ -0.21
CTNNA1-211ENST00000518910 ECM1Q16610 540 aa13.71□□□□□ -0.21
CTNNA1-211ENST00000518910 XKR3Q5GH77 459 aa13.71□□□□□ -0.21
CTNNA1-211ENST00000518910 ZNF484Q5JVG2 852 aa13.71□□□□□ -0.21
CTNNA1-211ENST00000518910 MFSD5Q6N075 450 aa13.71□□□□□ -0.21
CTNNA1-211ENST00000518910 EFCAB12Q6NXP0 572 aa13.71□□□□□ -0.21
CTNNA1-211ENST00000518910 ANO5Q75V66 913 aa13.71□□□□□ -0.21
CTNNA1-211ENST00000518910 ERMNQ8TAM6 284 aa13.71□□□□□ -0.21
CTNNA1-211ENST00000518910 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.71□□□□□ -0.211e-11■■□□□ 13.1
CTNNA1-211ENST00000518910 CDY2AQ9Y6F7 541 aa13.71□□□□□ -0.21
CTNNA1-211ENST00000518910 RSPH10B2B2RC85 870 aa13.7□□□□□ -0.22
CTNNA1-211ENST00000518910 USO1O60763 962 aaKnown RBP13.7□□□□□ -0.22
CTNNA1-211ENST00000518910 RSPH10BP0C881 870 aa13.7□□□□□ -0.22
CTNNA1-211ENST00000518910 SPATA31C1P0DKV0 1188 aa13.7□□□□□ -0.22
CTNNA1-211ENST00000518910 HOXC8P31273 242 aa13.7□□□□□ -0.22
CTNNA1-211ENST00000518910 POLGP54098 1239 aaPredicted RBP13.7□□□□□ -0.22
CTNNA1-211ENST00000518910 ADAM17P78536 824 aa13.7□□□□□ -0.22
CTNNA1-211ENST00000518910 DNM1Q05193 864 aaKnown RBP13.7□□□□□ -0.22
CTNNA1-211ENST00000518910 PPIGQ13427 754 aaKnown RBP eCLIP13.7□□□□□ -0.222e-8■□□□□ 10.5
CTNNA1-211ENST00000518910 DHX8Q14562 1220 aaKnown RBP13.7□□□□□ -0.22
CTNNA1-211ENST00000518910 MBTPS1Q14703 1052 aa13.7□□□□□ -0.22
CTNNA1-211ENST00000518910 KIZQ2M2Z5 673 aa13.7□□□□□ -0.22
CTNNA1-211ENST00000518910 TCTN1Q2MV58 587 aa13.7□□□□□ -0.22
CTNNA1-211ENST00000518910 ZNF365Q70YC5 407 aa13.7□□□□□ -0.22
CTNNA1-211ENST00000518910 CATSPER3Q86XQ3 398 aa13.7□□□□□ -0.22
CTNNA1-211ENST00000518910 CAGE1Q8TC20 777 aa13.7□□□□□ -0.22
CTNNA1-211ENST00000518910 TMEM143Q96AN5 459 aa13.7□□□□□ -0.22
CTNNA1-211ENST00000518910 GDF15Q99988 308 aa13.7□□□□□ -0.22
CTNNA1-211ENST00000518910 SEZ6LQ9BYH1 1024 aa13.7□□□□□ -0.22
CTNNA1-211ENST00000518910 ZSWIM4Q9H7M6 989 aa13.7□□□□□ -0.22
CTNNA1-211ENST00000518910 CYP26B1Q9NR63 512 aa13.7□□□□□ -0.22
CTNNA1-211ENST00000518910 DDX19AQ9NUU7 478 aaKnown RBP13.7□□□□□ -0.22
CTNNA1-211ENST00000518910 CEP131Q9UPN4 1083 aa13.7□□□□□ -0.22
CTNNA1-211ENST00000518910 ZDHHC9Q9Y397 364 aa13.7□□□□□ -0.22
CTNNA1-211ENST00000518910 COL1A2P08123 1366 aa13.7□□□□□ -0.22
CTNNA1-211ENST00000518910 M0QZ92 97 aa13.69□□□□□ -0.22
CTNNA1-211ENST00000518910 NBNO60934 754 aa13.69□□□□□ -0.22
CTNNA1-211ENST00000518910 CSDE1O75534 798 aaKnown RBP13.69□□□□□ -0.22
CTNNA1-211ENST00000518910 CHRNA1P02708 482 aa13.69□□□□□ -0.22
CTNNA1-211ENST00000518910 FGFR4P22455 802 aa13.69□□□□□ -0.22
CTNNA1-211ENST00000518910 FXR2P51116 673 aaKnown RBP eCLIP13.69□□□□□ -0.224e-9■■■□□ 16.3
CTNNA1-211ENST00000518910 MRPS6P82932 125 aaKnown RBP13.69□□□□□ -0.22
CTNNA1-211ENST00000518910 ORC2Q13416 577 aaPredicted RBP13.69□□□□□ -0.22
CTNNA1-211ENST00000518910 KRT79Q5XKE5 535 aa13.69□□□□□ -0.22
CTNNA1-211ENST00000518910 FAM117BQ6P1L5 589 aa13.69□□□□□ -0.22
CTNNA1-211ENST00000518910 TMCO2Q7Z6W1 182 aaPredicted RBP13.69□□□□□ -0.22
CTNNA1-211ENST00000518910 RSPH3Q86UC2 560 aa13.69□□□□□ -0.22
CTNNA1-211ENST00000518910 KSR1Q8IVT5 923 aa13.69□□□□□ -0.22
CTNNA1-211ENST00000518910 TNPO1Q92973 898 aaKnown RBP13.69□□□□□ -0.22
CTNNA1-211ENST00000518910 CDK5RAP3Q96JB5 506 aa13.69□□□□□ -0.22
CTNNA1-211ENST00000518910 RNPC3Q96LT9 517 aaKnown RBP13.69□□□□□ -0.22
CTNNA1-211ENST00000518910 RAB34Q9BZG1 259 aa13.69□□□□□ -0.22
CTNNA1-211ENST00000518910 ZSCAN16Q9H4T2 348 aaPredicted RBP13.69□□□□□ -0.22
CTNNA1-211ENST00000518910 CDHR5Q9HBB8 845 aa13.69□□□□□ -0.22
CTNNA1-211ENST00000518910 IL23AQ9NPF7 189 aa13.69□□□□□ -0.22
CTNNA1-211ENST00000518910 KIAA1024Q9UPX6 916 aa13.69□□□□□ -0.22
CTNNA1-211ENST00000518910 PCDHA2Q9Y5H9 948 aa13.69□□□□□ -0.22
CTNNA1-211ENST00000518910 MBLAC1A4D2B0 266 aaPredicted RBP13.68□□□□□ -0.22
CTNNA1-211ENST00000518910 ARHGEF35A5YM69 484 aa13.68□□□□□ -0.22
CTNNA1-211ENST00000518910 E9PMD0 336 aa13.68□□□□□ -0.22
CTNNA1-211ENST00000518910 RAD51AP2Q09MP3 1159 aa13.68□□□□□ -0.22
CTNNA1-211ENST00000518910 EMC2Q15006 297 aa13.68□□□□□ -0.22
CTNNA1-211ENST00000518910 PTPAQ15257 358 aa13.68□□□□□ -0.22
CTNNA1-211ENST00000518910 TMEM240Q5SV17 173 aa13.68□□□□□ -0.22
CTNNA1-211ENST00000518910 HAUS3Q68CZ6 603 aa13.68□□□□□ -0.22
CTNNA1-211ENST00000518910 TRAF7Q6Q0C0 670 aa13.68□□□□□ -0.22
CTNNA1-211ENST00000518910 USP49Q70CQ1 688 aa13.68□□□□□ -0.22
CTNNA1-211ENST00000518910 C16orf59Q7L2K0 433 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms