RNA–Protein interactions for RNA: ENST00000518780.1

CLN8-203, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-203ENST00000518780 TRPC6Q9Y210 931 aa10.57□□□□□ -0.72
CLN8-203ENST00000518780 TELO2Q9Y4R8 837 aa10.57□□□□□ -0.72
CLN8-203ENST00000518780 MCM3APO60318 1980 aa10.57□□□□□ -0.72
CLN8-203ENST00000518780 A0A0U1RQG5 324 aaPredicted RBP10.56□□□□□ -0.72
CLN8-203ENST00000518780 A0A1B0GVL5 298 aa10.56□□□□□ -0.72
CLN8-203ENST00000518780 A0A1W2PQ45 241 aaPredicted RBP10.56□□□□□ -0.72
CLN8-203ENST00000518780 A0A1W2PQY0 241 aa10.56□□□□□ -0.72
CLN8-203ENST00000518780 ARHGEF35A5YM69 484 aa10.56□□□□□ -0.72
CLN8-203ENST00000518780 ZNF202O95125 648 aa10.56□□□□□ -0.72
CLN8-203ENST00000518780 COL6A1P12109 1028 aa10.56□□□□□ -0.72
CLN8-203ENST00000518780 INSRRP14616 1297 aa10.56□□□□□ -0.72
CLN8-203ENST00000518780 HOXC8P31273 242 aa10.56□□□□□ -0.72
CLN8-203ENST00000518780 RARRES1P49788 294 aa10.56□□□□□ -0.72
CLN8-203ENST00000518780 NDUFA8P51970 172 aa10.56□□□□□ -0.72
CLN8-203ENST00000518780 CDC42EP1Q00587 391 aa10.56□□□□□ -0.72
CLN8-203ENST00000518780 PPFIA1Q13136 1202 aa10.56□□□□□ -0.72
CLN8-203ENST00000518780 ITGA7Q13683 1181 aa10.56□□□□□ -0.72
CLN8-203ENST00000518780 ZRSR1Q15695 479 aaKnown RBP10.56□□□□□ -0.72
CLN8-203ENST00000518780 ECM1Q16610 540 aa10.56□□□□□ -0.72
CLN8-203ENST00000518780 SKOR2Q2VWA4 1001 aaPredicted RBP10.56□□□□□ -0.72
CLN8-203ENST00000518780 XKR9Q5GH70 373 aa10.56□□□□□ -0.72
CLN8-203ENST00000518780 COL13A1Q5TAT6 717 aaPredicted RBP10.56□□□□□ -0.72
CLN8-203ENST00000518780 SV2BQ7L1I2 683 aa10.56□□□□□ -0.72
CLN8-203ENST00000518780 NECAB2Q7Z6G3 386 aa10.56□□□□□ -0.72
CLN8-203ENST00000518780 TRIM50Q86XT4 487 aa10.56□□□□□ -0.72
CLN8-203ENST00000518780 FMR1NBQ8N0W7 255 aaPredicted RBP10.56□□□□□ -0.72
CLN8-203ENST00000518780 RETREG2Q8NC44 543 aa10.56□□□□□ -0.72
CLN8-203ENST00000518780 MCPH1Q8NEM0 835 aa10.56□□□□□ -0.72
CLN8-203ENST00000518780 ENGASEQ8NFI3 743 aa10.56□□□□□ -0.72
CLN8-203ENST00000518780 SLC7A3Q8WY07 619 aa10.56□□□□□ -0.72
CLN8-203ENST00000518780 LARP4BQ92615 738 aaKnown RBP10.56□□□□□ -0.72
CLN8-203ENST00000518780 RAD54LQ92698 747 aa10.56□□□□□ -0.72
CLN8-203ENST00000518780 CEP170P1Q96L14 293 aa10.56□□□□□ -0.72
CLN8-203ENST00000518780 BHMT2Q9H2M3 363 aa10.56□□□□□ -0.72
CLN8-203ENST00000518780 TNMDQ9H2S6 317 aa10.56□□□□□ -0.72
CLN8-203ENST00000518780 KBTBD4Q9NVX7 518 aa10.56□□□□□ -0.72
CLN8-203ENST00000518780 WRAP73Q9P2S5 460 aaPredicted RBP10.56□□□□□ -0.72
CLN8-203ENST00000518780 SEPT9Q9UHD8 586 aaPredicted RBP10.56□□□□□ -0.72
CLN8-203ENST00000518780 MROH7Q68CQ1 1323 aa10.56□□□□□ -0.72
CLN8-203ENST00000518780 C17orf102A2RUQ5 167 aa10.55□□□□□ -0.72
CLN8-203ENST00000518780 MBLAC1A4D2B0 266 aaPredicted RBP10.55□□□□□ -0.72
CLN8-203ENST00000518780 ARVCFO00192 962 aa10.55□□□□□ -0.72
CLN8-203ENST00000518780 KINO60870 393 aaKnown RBP10.55□□□□□ -0.72
CLN8-203ENST00000518780 GADD45BO75293 160 aaPredicted RBP10.55□□□□□ -0.72
CLN8-203ENST00000518780 PLA2G4BP0C869 781 aa10.55□□□□□ -0.72
CLN8-203ENST00000518780 SMIM10L2AP0DMW4 78 aa10.55□□□□□ -0.72
CLN8-203ENST00000518780 SMIM10L2BP0DMW5 78 aa10.55□□□□□ -0.72
CLN8-203ENST00000518780 CYP11B2P19099 503 aa10.55□□□□□ -0.72
CLN8-203ENST00000518780 GUCY2CP25092 1073 aa10.55□□□□□ -0.72
CLN8-203ENST00000518780 MARK3P27448 753 aa10.55□□□□□ -0.72
CLN8-203ENST00000518780 TMOD1P28289 359 aa10.55□□□□□ -0.72
CLN8-203ENST00000518780 DNM2P50570 870 aa10.55□□□□□ -0.72
CLN8-203ENST00000518780 CDK7P50613 346 aa10.55□□□□□ -0.72
CLN8-203ENST00000518780 SLC12A3P55017 1021 aa10.55□□□□□ -0.72
CLN8-203ENST00000518780 PSMC6P62333 389 aa10.55□□□□□ -0.72
CLN8-203ENST00000518780 IRX5P78411 483 aaPredicted RBP10.55□□□□□ -0.72
CLN8-203ENST00000518780 ADAM17P78536 824 aa10.55□□□□□ -0.72
CLN8-203ENST00000518780 TBC1D8BQ0IIM8 1120 aa10.55□□□□□ -0.72
CLN8-203ENST00000518780 SNW1Q13573 536 aaKnown RBP10.55□□□□□ -0.72
CLN8-203ENST00000518780 GRIK4Q16099 956 aa10.55□□□□□ -0.72
CLN8-203ENST00000518780 NBPF20Q3BBV1 942 aa10.55□□□□□ -0.72
CLN8-203ENST00000518780 NAALADL2Q58DX5 795 aa10.55□□□□□ -0.72
CLN8-203ENST00000518780 TAF2Q6P1X5 1199 aa10.55□□□□□ -0.72
CLN8-203ENST00000518780 CNNM4Q6P4Q7 775 aa10.55□□□□□ -0.72
CLN8-203ENST00000518780 NME8Q8N427 588 aa10.55□□□□□ -0.72
CLN8-203ENST00000518780 PDILTQ8N807 584 aa10.55□□□□□ -0.72
CLN8-203ENST00000518780 CNNM3Q8NE01 707 aa10.55□□□□□ -0.72
CLN8-203ENST00000518780 PIGOQ8TEQ8 1089 aa10.55□□□□□ -0.72
CLN8-203ENST00000518780 DHX58Q96C10 678 aa10.55□□□□□ -0.72
CLN8-203ENST00000518780 ABHD8Q96I13 439 aa10.55□□□□□ -0.72
CLN8-203ENST00000518780 TOX2Q96NM4 488 aa10.55□□□□□ -0.72
CLN8-203ENST00000518780 DHX33Q9H6R0 707 aaKnown RBP10.55□□□□□ -0.72
CLN8-203ENST00000518780 C17orf75Q9HAS0 396 aa10.55□□□□□ -0.72
CLN8-203ENST00000518780 BLOC1S4Q9NUP1 217 aa10.55□□□□□ -0.72
CLN8-203ENST00000518780 GTF2IRD1Q9UHL9 959 aa10.55□□□□□ -0.72
CLN8-203ENST00000518780 HTTP42858 3142 aa10.54□□□□□ -0.72
CLN8-203ENST00000518780 A0A087X0B3 334 aa10.54□□□□□ -0.72
CLN8-203ENST00000518780 IGKV6-21A0A0C4DH24 114 aa10.54□□□□□ -0.72
CLN8-203ENST00000518780 E9PMD0 336 aa10.54□□□□□ -0.72
CLN8-203ENST00000518780 ASAP2O43150 1006 aa10.54□□□□□ -0.72
CLN8-203ENST00000518780 MAFO75444 373 aaPredicted RBP10.54□□□□□ -0.72
CLN8-203ENST00000518780 SCP2P22307 547 aa10.54□□□□□ -0.72
CLN8-203ENST00000518780 MNX1P50219 401 aaPredicted RBP10.54□□□□□ -0.72
CLN8-203ENST00000518780 POLGP54098 1239 aaPredicted RBP10.54□□□□□ -0.72
CLN8-203ENST00000518780 RTP1P59025 263 aa10.54□□□□□ -0.72
CLN8-203ENST00000518780 SNX17Q15036 470 aa10.54□□□□□ -0.72
CLN8-203ENST00000518780 LONRF3Q496Y0 759 aa10.54□□□□□ -0.72
CLN8-203ENST00000518780 IER5Q5VY09 327 aa10.54□□□□□ -0.72
CLN8-203ENST00000518780 PADI6Q6TGC4 694 aa10.54□□□□□ -0.72
CLN8-203ENST00000518780 SLC39A5Q6ZMH5 540 aa10.54□□□□□ -0.72
CLN8-203ENST00000518780 KRBA2Q6ZNG9 492 aa10.54□□□□□ -0.72
CLN8-203ENST00000518780 FAM43BQ6ZT52 329 aaPredicted RBP10.54□□□□□ -0.72
CLN8-203ENST00000518780 KCNK18Q7Z418 384 aa10.54□□□□□ -0.72
CLN8-203ENST00000518780 RPAINQ86UA6 219 aa10.54□□□□□ -0.72
CLN8-203ENST00000518780 TCP11Q8WWU5 503 aa10.54□□□□□ -0.72
CLN8-203ENST00000518780 CEP89Q96ST8 783 aa10.54□□□□□ -0.72
CLN8-203ENST00000518780 PLIN2Q99541 437 aa10.54□□□□□ -0.72
CLN8-203ENST00000518780 PANK2Q9BZ23 570 aa10.54□□□□□ -0.72
CLN8-203ENST00000518780 GTPBP4Q9BZE4 634 aaKnown RBP10.54□□□□□ -0.72
CLN8-203ENST00000518780 SENP6Q9GZR1 1112 aaPredicted RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms