RNA–Protein interactions for RNA: ENST00000518140.5

SLIT3-204, Transcript of slit guidance ligand 3, humanhuman

TSL 1 (best)

Gene SLIT3, Length 2,090 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-204ENST00000518140 COPB2P35606 906 aa25.81■■□□□ 1.72
SLIT3-204ENST00000518140 ANKRD23Q86SG2 305 aa25.81■■□□□ 1.72
SLIT3-204ENST00000518140 KSR1Q8IVT5 923 aa25.81■■□□□ 1.72
SLIT3-204ENST00000518140 FAM114A1Q8IWE2 563 aa25.81■■□□□ 1.72
SLIT3-204ENST00000518140 SMAP1Q8IYB5 467 aaPredicted RBP25.81■■□□□ 1.72
SLIT3-204ENST00000518140 USO1O60763 962 aaKnown RBP25.81■■□□□ 1.72
SLIT3-204ENST00000518140 HUNKP57058 714 aa25.81■■□□□ 1.72
SLIT3-204ENST00000518140 FOXR2Q6PJQ5 311 aa25.81■■□□□ 1.72
SLIT3-204ENST00000518140 ODF2LQ9ULJ1 636 aa25.81■■□□□ 1.72
SLIT3-204ENST00000518140 SLC45A1Q9Y2W3 748 aa25.81■■□□□ 1.72
SLIT3-204ENST00000518140 RNF225M0QZC1 329 aaPredicted RBP25.8■■□□□ 1.72
SLIT3-204ENST00000518140 UBA1P22314 1058 aaKnown RBP25.8■■□□□ 1.72
SLIT3-204ENST00000518140 GTF2F1P35269 517 aaKnown RBP eCLIP25.8■■□□□ 1.72
SLIT3-204ENST00000518140 FKBP3Q00688 224 aaKnown RBP25.8■■□□□ 1.72
SLIT3-204ENST00000518140 KNOP1Q1ED39 458 aaKnown RBP25.8■■□□□ 1.72
SLIT3-204ENST00000518140 PSAPP07602 524 aa25.79■■□□□ 1.72
SLIT3-204ENST00000518140 XKR9Q5GH70 373 aa25.79■■□□□ 1.72
SLIT3-204ENST00000518140 ODR4Q5SWX8 454 aa25.79■■□□□ 1.72
SLIT3-204ENST00000518140 CHADLQ6NUI6 762 aa25.79■■□□□ 1.72
SLIT3-204ENST00000518140 SHCBP1Q8NEM2 672 aa25.79■■□□□ 1.72
SLIT3-204ENST00000518140 TMX1Q9H3N1 280 aa25.79■■□□□ 1.72
SLIT3-204ENST00000518140 ZBTB48P10074 688 aaPredicted RBP25.79■■□□□ 1.72
SLIT3-204ENST00000518140 LY6KQ17RY6 165 aa25.79■■□□□ 1.72
SLIT3-204ENST00000518140 ZNF720Q7Z2F6 126 aa25.79■■□□□ 1.72
SLIT3-204ENST00000518140 NOC4LQ9BVI4 516 aaKnown RBP25.79■■□□□ 1.72
SLIT3-204ENST00000518140 GPRC5CQ9NQ84 441 aa25.79■■□□□ 1.72
SLIT3-204ENST00000518140 KIF20AO95235 890 aa25.78■■□□□ 1.72
SLIT3-204ENST00000518140 GYPCP04921 128 aa25.78■■□□□ 1.72
SLIT3-204ENST00000518140 BMT2Q1RMZ1 405 aa25.78■■□□□ 1.72
SLIT3-204ENST00000518140 ANKEF1Q9NU02 776 aa25.78■■□□□ 1.72
SLIT3-204ENST00000518140 ARIH2O95376 493 aa25.78■■□□□ 1.72
SLIT3-204ENST00000518140 TMEM139Q8IV31 216 aa25.78■■□□□ 1.72
SLIT3-204ENST00000518140 SYNGAP1Q96PV0 1343 aa25.77■■□□□ 1.72
SLIT3-204ENST00000518140 FGFR1OPO95684 399 aaKnown RBP25.77■■□□□ 1.72
SLIT3-204ENST00000518140 SUPT20HL2P0C7V6 817 aa25.77■■□□□ 1.72
SLIT3-204ENST00000518140 CASP14P31944 242 aa25.77■■□□□ 1.72
SLIT3-204ENST00000518140 FXR1P51114 621 aaKnown RBP eCLIP25.77■■□□□ 1.72
SLIT3-204ENST00000518140 FAM178BQ8IXR5 827 aa25.77■■□□□ 1.72
SLIT3-204ENST00000518140 TRAF3IP3Q9Y228 551 aa25.77■■□□□ 1.72
SLIT3-204ENST00000518140 ITIH6Q6UXX5 1313 aa25.77■■□□□ 1.72
SLIT3-204ENST00000518140 ATG7O95352 703 aa25.76■■□□□ 1.71
SLIT3-204ENST00000518140 ATP4AP20648 1035 aa25.76■■□□□ 1.71
SLIT3-204ENST00000518140 KLK7P49862 253 aa25.76■■□□□ 1.71
SLIT3-204ENST00000518140 ADAM9Q13443 819 aa25.76■■□□□ 1.71
SLIT3-204ENST00000518140 TMEM63BQ5T3F8 832 aa25.76■■□□□ 1.71
SLIT3-204ENST00000518140 MIS18BP1Q6P0N0 1132 aa25.76■■□□□ 1.71
SLIT3-204ENST00000518140 PPFIBP1Q86W92 1011 aa25.76■■□□□ 1.71
SLIT3-204ENST00000518140 GTF3C2Q8WUA4 911 aaPredicted RBP25.76■■□□□ 1.71
SLIT3-204ENST00000518140 CCDC43Q96MW1 224 aaKnown RBP25.76■■□□□ 1.71
SLIT3-204ENST00000518140 SEL1LQ9UBV2 794 aa25.76■■□□□ 1.71
SLIT3-204ENST00000518140 TGFB1I1O43294 461 aa25.76■■□□□ 1.71
SLIT3-204ENST00000518140 FARP2O94887 1054 aaPredicted RBP25.76■■□□□ 1.71
SLIT3-204ENST00000518140 TBC1D8BQ0IIM8 1120 aa25.76■■□□□ 1.71
SLIT3-204ENST00000518140 ZC3H3Q8IXZ2 948 aaKnown RBP25.76■■□□□ 1.71
SLIT3-204ENST00000518140 ATP6V0A1Q93050 837 aa25.76■■□□□ 1.71
SLIT3-204ENST00000518140 ZNFX1Q9P2E3 1918 aaKnown RBP25.75■■□□□ 1.71
SLIT3-204ENST00000518140 ZMYM2Q9UBW7 1377 aa25.75■■□□□ 1.71
SLIT3-204ENST00000518140 GSTTP1A0A1W2PQM5 241 aa25.75■■□□□ 1.71
SLIT3-204ENST00000518140 USP27XA6NNY8 438 aa25.75■■□□□ 1.71
SLIT3-204ENST00000518140 AKR1B15C9JRZ8 316 aaPredicted RBP25.75■■□□□ 1.71
SLIT3-204ENST00000518140 DNM2P50570 870 aa25.75■■□□□ 1.71
SLIT3-204ENST00000518140 SOX10P56693 466 aa25.75■■□□□ 1.71
SLIT3-204ENST00000518140 EDRF1Q3B7T1 1238 aa25.75■■□□□ 1.71
SLIT3-204ENST00000518140 VWA3BQ502W6 1294 aa25.75■■□□□ 1.71
SLIT3-204ENST00000518140 FBXO16Q8IX29 292 aaPredicted RBP25.75■■□□□ 1.71
SLIT3-204ENST00000518140 MORF4L1Q9UBU8 362 aa25.75■■□□□ 1.71
SLIT3-204ENST00000518140 RASSF10A6NK89 507 aa25.75■■□□□ 1.71
SLIT3-204ENST00000518140 PDXKO00764 312 aa25.75■■□□□ 1.71
SLIT3-204ENST00000518140 PRKCEQ02156 737 aa25.75■■□□□ 1.71
SLIT3-204ENST00000518140 CEP170P1Q96L14 293 aa25.75■■□□□ 1.71
SLIT3-204ENST00000518140 CEP63Q96MT8 703 aa25.75■■□□□ 1.71
SLIT3-204ENST00000518140 WDR81Q562E7 1941 aa25.74■■□□□ 1.71
SLIT3-204ENST00000518140 CLIC2O15247 247 aa25.74■■□□□ 1.71
SLIT3-204ENST00000518140 EIF3DO15371 548 aaKnown RBP eCLIP25.74■■□□□ 1.71
SLIT3-204ENST00000518140 GGPS1O95749 300 aa25.74■■□□□ 1.71
SLIT3-204ENST00000518140 NR2F2P24468 414 aa25.74■■□□□ 1.71
SLIT3-204ENST00000518140 GCLCP48506 637 aaPredicted RBP25.74■■□□□ 1.71
SLIT3-204ENST00000518140 CCNA1P78396 465 aa25.74■■□□□ 1.71
SLIT3-204ENST00000518140 STRA6Q9BX79 667 aa25.74■■□□□ 1.71
SLIT3-204ENST00000518140 NDST4Q9H3R1 872 aa25.74■■□□□ 1.71
SLIT3-204ENST00000518140 DDX41Q9UJV9 622 aaKnown RBP25.74■■□□□ 1.71
SLIT3-204ENST00000518140 A0A1W2PQC6 194 aa25.73■■□□□ 1.71
SLIT3-204ENST00000518140 TGFB3P10600 412 aa25.73■■□□□ 1.71
SLIT3-204ENST00000518140 ADORA2AP29274 412 aa25.73■■□□□ 1.71
SLIT3-204ENST00000518140 ZNF157P51786 506 aaPredicted RBP25.73■■□□□ 1.71
SLIT3-204ENST00000518140 SYCP1Q15431 976 aa25.73■■□□□ 1.71
SLIT3-204ENST00000518140 PPP4R3CPQ6ZMV5 832 aa25.73■■□□□ 1.71
SLIT3-204ENST00000518140 PCYT2Q99447 389 aa25.73■■□□□ 1.71
SLIT3-204ENST00000518140 PDGFCQ9NRA1 345 aa25.73■■□□□ 1.71
SLIT3-204ENST00000518140 MAN2A1Q16706 1144 aa25.73■■□□□ 1.71
SLIT3-204ENST00000518140 CCDC40Q4G0X9 1142 aa25.73■■□□□ 1.71
SLIT3-204ENST00000518140 FAM102BQ5T8I3 360 aa25.73■■□□□ 1.71
SLIT3-204ENST00000518140 OTUD6AQ7L8S5 288 aa25.73■■□□□ 1.71
SLIT3-204ENST00000518140 RASAL3Q86YV0 1011 aa25.73■■□□□ 1.71
SLIT3-204ENST00000518140 MORC4Q8TE76 937 aa25.73■■□□□ 1.71
SLIT3-204ENST00000518140 TYW1Q9NV66 732 aaKnown RBP25.73■■□□□ 1.71
SLIT3-204ENST00000518140 SEPT9Q9UHD8 586 aaPredicted RBP25.73■■□□□ 1.71
SLIT3-204ENST00000518140 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP25.73■■□□□ 1.71
SLIT3-204ENST00000518140 MAFBQ9Y5Q3 323 aaPredicted RBP25.73■■□□□ 1.71
SLIT3-204ENST00000518140 MFAP3LO75121 409 aa25.72■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms