RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 C6orf203Q9P0P8 240 aaPredicted RBP5.29□□□□□ -1.56
HMGB1P19-201ENST00000517578 SEPT10Q9P0V9 454 aa5.29□□□□□ -1.56
HMGB1P19-201ENST00000517578 CTTNBP2NLQ9P2B4 639 aa5.29□□□□□ -1.56
HMGB1P19-201ENST00000517578 MYO1AQ9UBC5 1043 aa5.29□□□□□ -1.56
HMGB1P19-201ENST00000517578 TUBGCP4Q9UGJ1 667 aa5.29□□□□□ -1.56
HMGB1P19-201ENST00000517578 NRBP1Q9UHY1 535 aa5.29□□□□□ -1.56
HMGB1P19-201ENST00000517578 CDC23Q9UJX2 597 aa5.29□□□□□ -1.56
HMGB1P19-201ENST00000517578 G3BP2Q9UN86 482 aaKnown RBP5.29□□□□□ -1.56
HMGB1P19-201ENST00000517578 ITM2BQ9Y287 266 aa5.29□□□□□ -1.56
HMGB1P19-201ENST00000517578 COMMD10Q9Y6G5 202 aa5.29□□□□□ -1.56
HMGB1P19-201ENST00000517578 ZNF608Q9ULD9 1512 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P19-201ENST00000517578 USP27XA6NNY8 438 aa5.28□□□□□ -1.56
HMGB1P19-201ENST00000517578 BIN1O00499 593 aa5.28□□□□□ -1.56
HMGB1P19-201ENST00000517578 AP5Z1O43299 807 aa5.28□□□□□ -1.56
HMGB1P19-201ENST00000517578 STX6O43752 255 aa5.28□□□□□ -1.56
HMGB1P19-201ENST00000517578 MARCH6O60337 910 aa5.28□□□□□ -1.56
HMGB1P19-201ENST00000517578 USO1O60763 962 aaKnown RBP5.28□□□□□ -1.56
HMGB1P19-201ENST00000517578 LEFTY1O75610 366 aa5.28□□□□□ -1.56
HMGB1P19-201ENST00000517578 WDHD1O75717 1129 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P19-201ENST00000517578 STAM2O75886 525 aa5.28□□□□□ -1.56
HMGB1P19-201ENST00000517578 PRPF6O94906 941 aaKnown RBP5.28□□□□□ -1.56
HMGB1P19-201ENST00000517578 MBD4O95243 580 aa5.28□□□□□ -1.56
HMGB1P19-201ENST00000517578 ANP32DO95626 131 aa5.28□□□□□ -1.56
HMGB1P19-201ENST00000517578 RNASE1P07998 156 aaKnown RBP5.28□□□□□ -1.56
HMGB1P19-201ENST00000517578 GSTP1P09211 210 aaKnown RBP5.28□□□□□ -1.56
HMGB1P19-201ENST00000517578 CPA3P15088 417 aa5.28□□□□□ -1.56
HMGB1P19-201ENST00000517578 POLR2EP19388 210 aaKnown RBP5.28□□□□□ -1.56
HMGB1P19-201ENST00000517578 FUT4P22083 530 aa5.28□□□□□ -1.56
HMGB1P19-201ENST00000517578 GNA15P30679 374 aa5.28□□□□□ -1.56
HMGB1P19-201ENST00000517578 ATICP31939 592 aa5.28□□□□□ -1.56
HMGB1P19-201ENST00000517578 KRT9P35527 623 aa5.28□□□□□ -1.56
HMGB1P19-201ENST00000517578 CD96P40200 585 aa5.28□□□□□ -1.56
HMGB1P19-201ENST00000517578 NEK4P51957 841 aa5.28□□□□□ -1.56
HMGB1P19-201ENST00000517578 GNGT1P63211 74 aa5.28□□□□□ -1.56
HMGB1P19-201ENST00000517578 POU5F1Q01860 360 aaKnown RBP5.28□□□□□ -1.56
HMGB1P19-201ENST00000517578 TUBA3CQ13748 450 aa5.28□□□□□ -1.56
HMGB1P19-201ENST00000517578 PKP1Q13835 747 aa5.28□□□□□ -1.56
HMGB1P19-201ENST00000517578 TRIM29Q14134 588 aa5.28□□□□□ -1.56
HMGB1P19-201ENST00000517578 TTLL4Q14679 1199 aa5.28□□□□□ -1.56
HMGB1P19-201ENST00000517578 E2F5Q15329 346 aa5.28□□□□□ -1.56
HMGB1P19-201ENST00000517578 CCDC144BQ3MJ40 725 aa5.28□□□□□ -1.56
HMGB1P19-201ENST00000517578 CFAP100Q494V2 611 aa5.28□□□□□ -1.56
HMGB1P19-201ENST00000517578 SLC44A4Q53GD3 710 aa5.28□□□□□ -1.56
HMGB1P19-201ENST00000517578 SPECC1Q5M775 1068 aa5.28□□□□□ -1.56
HMGB1P19-201ENST00000517578 CCDC122Q5T0U0 273 aa5.28□□□□□ -1.56
HMGB1P19-201ENST00000517578 AKNAD1Q5T1N1 836 aa5.28□□□□□ -1.56
HMGB1P19-201ENST00000517578 CREB3L3Q68CJ9 461 aa5.28□□□□□ -1.56
HMGB1P19-201ENST00000517578 NCCRP1Q6ZVX7 275 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P19-201ENST00000517578 PHLDB2Q86SQ0 1253 aa5.28□□□□□ -1.56
HMGB1P19-201ENST00000517578 PDZD3Q86UT5 571 aa5.28□□□□□ -1.56
HMGB1P19-201ENST00000517578 NPAS4Q8IUM7 802 aa5.28□□□□□ -1.56
HMGB1P19-201ENST00000517578 SULF2Q8IWU5 870 aa5.28□□□□□ -1.56
HMGB1P19-201ENST00000517578 CCAR1Q8IX12 1150 aaKnown RBP5.28□□□□□ -1.56
HMGB1P19-201ENST00000517578 CCDC144CPQ8IYA2 1237 aa5.28□□□□□ -1.56
HMGB1P19-201ENST00000517578 FAM186BQ8IYM0 893 aa5.28□□□□□ -1.56
HMGB1P19-201ENST00000517578 SYCP3Q8IZU3 236 aa5.28□□□□□ -1.56
HMGB1P19-201ENST00000517578 TTC39CQ8N584 583 aa5.28□□□□□ -1.56
HMGB1P19-201ENST00000517578 TRIML1Q8N9V2 468 aa5.28□□□□□ -1.56
HMGB1P19-201ENST00000517578 STKLD1Q8NE28 680 aa5.28□□□□□ -1.56
HMGB1P19-201ENST00000517578 RASSF8Q8NHQ8 419 aa5.28□□□□□ -1.56
HMGB1P19-201ENST00000517578 CAGE1Q8TC20 777 aa5.28□□□□□ -1.56
HMGB1P19-201ENST00000517578 STK35Q8TDR2 534 aa5.28□□□□□ -1.56
HMGB1P19-201ENST00000517578 SH3GL2Q99962 352 aa5.28□□□□□ -1.56
HMGB1P19-201ENST00000517578 GOLPH3LQ9H4A5 285 aa5.28□□□□□ -1.56
HMGB1P19-201ENST00000517578 CLSTN2Q9H4D0 955 aa5.28□□□□□ -1.56
HMGB1P19-201ENST00000517578 PIDD1Q9HB75 910 aa5.28□□□□□ -1.56
HMGB1P19-201ENST00000517578 PARVBQ9HBI1 364 aa5.28□□□□□ -1.56
HMGB1P19-201ENST00000517578 HELLSQ9NRZ9 838 aa5.28□□□□□ -1.56
HMGB1P19-201ENST00000517578 KRT82Q9NSB4 513 aa5.28□□□□□ -1.56
HMGB1P19-201ENST00000517578 TBCCD1Q9NVR7 557 aa5.28□□□□□ -1.56
HMGB1P19-201ENST00000517578 NDUFA13Q9P0J0 144 aa5.28□□□□□ -1.56
HMGB1P19-201ENST00000517578 PARP2Q9UGN5 583 aa5.28□□□□□ -1.56
HMGB1P19-201ENST00000517578 ADAMTS6Q9UKP5 1117 aa5.28□□□□□ -1.56
HMGB1P19-201ENST00000517578 TTF2Q9UNY4 1162 aaKnown RBP5.28□□□□□ -1.56
HMGB1P19-201ENST00000517578 BZW2Q9Y6E2 419 aaKnown RBP5.28□□□□□ -1.56
HMGB1P19-201ENST00000517578 SSH2Q76I76 1423 aa5.28□□□□□ -1.56
HMGB1P19-201ENST00000517578 EHBP1L1Q8N3D4 1523 aa5.28□□□□□ -1.56
HMGB1P19-201ENST00000517578 MBD5Q9P267 1494 aa5.27□□□□□ -1.57
HMGB1P19-201ENST00000517578 CLTCL1P53675 1640 aa5.27□□□□□ -1.57
HMGB1P19-201ENST00000517578 KAT6BQ8WYB5 2073 aa5.27□□□□□ -1.57
HMGB1P19-201ENST00000517578 GPR75-ASB3A0A0A6YYF3 556 aa5.27□□□□□ -1.57
HMGB1P19-201ENST00000517578 FRMD3A2A2Y4 597 aa5.27□□□□□ -1.57
HMGB1P19-201ENST00000517578 IQCA1LA6NCM1 817 aa5.27□□□□□ -1.57
HMGB1P19-201ENST00000517578 TMEM247A6NEH6 219 aa5.27□□□□□ -1.57
HMGB1P19-201ENST00000517578 TBKBP1A7MCY6 615 aa5.27□□□□□ -1.57
HMGB1P19-201ENST00000517578 ANKRD65E5RJM6 399 aa5.27□□□□□ -1.57
HMGB1P19-201ENST00000517578 PRPF3O43395 683 aaKnown RBP5.27□□□□□ -1.57
HMGB1P19-201ENST00000517578 STX10O60499 249 aa5.27□□□□□ -1.57
HMGB1P19-201ENST00000517578 DIAPH2O60879 1101 aa5.27□□□□□ -1.57
HMGB1P19-201ENST00000517578 CUTAO60888 179 aa5.27□□□□□ -1.57
HMGB1P19-201ENST00000517578 PARNO95453 639 aaKnown RBP5.27□□□□□ -1.57
HMGB1P19-201ENST00000517578 FAM107AO95990 144 aa5.27□□□□□ -1.57
HMGB1P19-201ENST00000517578 F13A1P00488 732 aa5.27□□□□□ -1.57
HMGB1P19-201ENST00000517578 U2AF1L5P0DN76 240 aaPredicted RBP5.27□□□□□ -1.57
HMGB1P19-201ENST00000517578 ARNTP27540 789 aa5.27□□□□□ -1.57
HMGB1P19-201ENST00000517578 GBP1P32455 592 aa5.27□□□□□ -1.57
HMGB1P19-201ENST00000517578 TCF7P36402 384 aaPredicted RBP5.27□□□□□ -1.57
HMGB1P19-201ENST00000517578 GNAQP50148 359 aa5.27□□□□□ -1.57
HMGB1P19-201ENST00000517578 PMS2P54278 862 aa5.27□□□□□ -1.57
HMGB1P19-201ENST00000517578 CSE1LP55060 971 aaKnown RBP5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms