RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 LRRC26Q2I0M4 334 aa11.05□□□□□ -0.64
CLN8-202ENST00000517514 TPRNQ4KMQ1 711 aa11.05□□□□□ -0.64
CLN8-202ENST00000517514 NFRKBQ6P4R8 1299 aa11.05□□□□□ -0.64
CLN8-202ENST00000517514 SLC39A5Q6ZMH5 540 aa11.05□□□□□ -0.64
CLN8-202ENST00000517514 FMR1NBQ8N0W7 255 aaPredicted RBP11.05□□□□□ -0.64
CLN8-202ENST00000517514 PDILTQ8N807 584 aa11.05□□□□□ -0.64
CLN8-202ENST00000517514 FSIP1Q8NA03 581 aa11.05□□□□□ -0.64
CLN8-202ENST00000517514 ERMNQ8TAM6 284 aa11.05□□□□□ -0.64
CLN8-202ENST00000517514 LMBR1Q8WVP7 490 aa11.05□□□□□ -0.64
CLN8-202ENST00000517514 WNT8BQ93098 351 aa11.05□□□□□ -0.64
CLN8-202ENST00000517514 GLT1D1Q96MS3 346 aa11.05□□□□□ -0.64
CLN8-202ENST00000517514 NACC1Q96RE7 527 aa11.05□□□□□ -0.64
CLN8-202ENST00000517514 XPNPEP1Q9NQW7 623 aa11.05□□□□□ -0.64
CLN8-202ENST00000517514 STARD7Q9NQZ5 370 aa11.05□□□□□ -0.64
CLN8-202ENST00000517514 ANKEF1Q9NU02 776 aa11.05□□□□□ -0.64
CLN8-202ENST00000517514 SEPT9Q9UHD8 586 aaPredicted RBP11.05□□□□□ -0.64
CLN8-202ENST00000517514 GTF2IRD1Q9UHL9 959 aa11.05□□□□□ -0.64
CLN8-202ENST00000517514 DBR1Q9UK59 544 aaKnown RBP11.05□□□□□ -0.64
CLN8-202ENST00000517514 ZNF215Q9UL58 517 aaPredicted RBP11.05□□□□□ -0.64
CLN8-202ENST00000517514 STK24Q9Y6E0 443 aa11.05□□□□□ -0.64
CLN8-202ENST00000517514 IGKV6-21A0A0C4DH24 114 aa11.04□□□□□ -0.64
CLN8-202ENST00000517514 A0A0U1RQG5 324 aaPredicted RBP11.04□□□□□ -0.64
CLN8-202ENST00000517514 CCDC85CA6NKD9 419 aa11.04□□□□□ -0.64
CLN8-202ENST00000517514 POLR2DO15514 142 aaKnown RBP11.04□□□□□ -0.64
CLN8-202ENST00000517514 TREHO43280 583 aa11.04□□□□□ -0.64
CLN8-202ENST00000517514 C22orf31O95567 290 aa11.04□□□□□ -0.64
CLN8-202ENST00000517514 XRCC6P12956 609 aaKnown RBP eCLIP11.04□□□□□ -0.64
CLN8-202ENST00000517514 ATN1P54259 1190 aaPredicted RBP11.04□□□□□ -0.64
CLN8-202ENST00000517514 CHMP4BP1P59074 171 aa11.04□□□□□ -0.64
CLN8-202ENST00000517514 PPFIA1Q13136 1202 aa11.04□□□□□ -0.64
CLN8-202ENST00000517514 MCM6Q14566 821 aa11.04□□□□□ -0.64
CLN8-202ENST00000517514 LONRF3Q496Y0 759 aa11.04□□□□□ -0.64
CLN8-202ENST00000517514 MTERF2Q49AM1 385 aa11.04□□□□□ -0.64
CLN8-202ENST00000517514 ARSHQ5FYA8 562 aa11.04□□□□□ -0.64
CLN8-202ENST00000517514 ZNF484Q5JVG2 852 aa11.04□□□□□ -0.64
CLN8-202ENST00000517514 RUFY4Q6ZNE9 571 aa11.04□□□□□ -0.64
CLN8-202ENST00000517514 CKAP2LQ8IYA6 745 aa11.04□□□□□ -0.64
CLN8-202ENST00000517514 SYT2Q8N9I0 419 aaPredicted RBP11.04□□□□□ -0.64
CLN8-202ENST00000517514 MRPS27Q92552 414 aaKnown RBP11.04□□□□□ -0.64
CLN8-202ENST00000517514 DHX38Q92620 1227 aaKnown RBP11.04□□□□□ -0.64
CLN8-202ENST00000517514 RAD54LQ92698 747 aa11.04□□□□□ -0.64
CLN8-202ENST00000517514 FAM167AQ96KS9 214 aa11.04□□□□□ -0.64
CLN8-202ENST00000517514 RUSC1Q9BVN2 902 aa11.04□□□□□ -0.64
CLN8-202ENST00000517514 KATNAL1Q9BW62 490 aa11.04□□□□□ -0.64
CLN8-202ENST00000517514 TRPV6Q9H1D0 765 aa11.04□□□□□ -0.64
CLN8-202ENST00000517514 C11orf49Q9H6J7 331 aa11.04□□□□□ -0.64
CLN8-202ENST00000517514 DHX33Q9H6R0 707 aaKnown RBP11.04□□□□□ -0.64
CLN8-202ENST00000517514 CYP26B1Q9NR63 512 aa11.04□□□□□ -0.64
CLN8-202ENST00000517514 NRBP2Q9NSY0 501 aa11.04□□□□□ -0.64
CLN8-202ENST00000517514 TRMT13Q9NUP7 481 aaKnown RBP11.04□□□□□ -0.64
CLN8-202ENST00000517514 KCNH3Q9ULD8 1083 aa11.04□□□□□ -0.64
CLN8-202ENST00000517514 TRPC6Q9Y210 931 aa11.04□□□□□ -0.64
CLN8-202ENST00000517514 KDM3AQ9Y4C1 1321 aa11.04□□□□□ -0.64
CLN8-202ENST00000517514 COL1A2P08123 1366 aa11.03□□□□□ -0.64
CLN8-202ENST00000517514 B4GALT4O60513 344 aa11.03□□□□□ -0.64
CLN8-202ENST00000517514 DKC1O60832 514 aaKnown RBP eCLIP11.03□□□□□ -0.64
CLN8-202ENST00000517514 NR1I2O75469 434 aa11.03□□□□□ -0.64
CLN8-202ENST00000517514 CD4P01730 458 aa11.03□□□□□ -0.64
CLN8-202ENST00000517514 PLA2G4BP0C869 781 aa11.03□□□□□ -0.64
CLN8-202ENST00000517514 KLRC1P26715 233 aa11.03□□□□□ -0.64
CLN8-202ENST00000517514 MCM4P33991 863 aa11.03□□□□□ -0.64
CLN8-202ENST00000517514 UBE2HP62256 183 aa11.03□□□□□ -0.64
CLN8-202ENST00000517514 IGBP1P78318 339 aa11.03□□□□□ -0.64
CLN8-202ENST00000517514 PTPN11Q06124 597 aaPredicted RBP11.03□□□□□ -0.64
CLN8-202ENST00000517514 MAPK7Q13164 816 aa11.03□□□□□ -0.64
CLN8-202ENST00000517514 DRP2Q13474 957 aa11.03□□□□□ -0.64
CLN8-202ENST00000517514 TRIM71Q2Q1W2 868 aaKnown RBP11.03□□□□□ -0.64
CLN8-202ENST00000517514 XKR9Q5GH70 373 aa11.03□□□□□ -0.64
CLN8-202ENST00000517514 C1orf53Q5VUE5 145 aa11.03□□□□□ -0.64
CLN8-202ENST00000517514 RRAGBQ5VZM2 374 aa11.03□□□□□ -0.64
CLN8-202ENST00000517514 MTHFD1LQ6UB35 978 aa11.03□□□□□ -0.64
CLN8-202ENST00000517514 C1orf186Q6ZWK4 172 aa11.03□□□□□ -0.64
CLN8-202ENST00000517514 NECAB2Q7Z6G3 386 aa11.03□□□□□ -0.64
CLN8-202ENST00000517514 SH3RF1Q7Z6J0 888 aa11.03□□□□□ -0.64
CLN8-202ENST00000517514 FAM126BQ8IXS8 530 aa11.03□□□□□ -0.64
CLN8-202ENST00000517514 DAW1Q8N136 415 aa11.03□□□□□ -0.64
CLN8-202ENST00000517514 GPT2Q8TD30 523 aa11.03□□□□□ -0.64
CLN8-202ENST00000517514 VTI1AQ96AJ9 217 aa11.03□□□□□ -0.64
CLN8-202ENST00000517514 DHX58Q96C10 678 aa11.03□□□□□ -0.64
CLN8-202ENST00000517514 CALML4Q96GE6 196 aa11.03□□□□□ -0.64
CLN8-202ENST00000517514 CEP170P1Q96L14 293 aa11.03□□□□□ -0.64
CLN8-202ENST00000517514 GBP4Q96PP9 640 aa11.03□□□□□ -0.64
CLN8-202ENST00000517514 NT5C3AQ9H0P0 336 aa11.03□□□□□ -0.64
CLN8-202ENST00000517514 BHMT2Q9H2M3 363 aa11.03□□□□□ -0.64
CLN8-202ENST00000517514 POLD4Q9HCU8 107 aa11.03□□□□□ -0.64
CLN8-202ENST00000517514 FAM13BQ9NYF5 915 aa11.03□□□□□ -0.64
CLN8-202ENST00000517514 PCDH10Q9P2E7 1040 aa11.03□□□□□ -0.64
CLN8-202ENST00000517514 SERTAD1Q9UHV2 236 aa11.03□□□□□ -0.64
CLN8-202ENST00000517514 DNM3Q9UQ16 869 aa11.03□□□□□ -0.64
CLN8-202ENST00000517514 NRCAMQ92823 1304 aa11.03□□□□□ -0.64
CLN8-202ENST00000517514 TANC1Q9C0D5 1861 aa11.02□□□□□ -0.64
CLN8-202ENST00000517514 NPHP3-ACAD11A0A0J9YXS1 232 aa11.02□□□□□ -0.65
CLN8-202ENST00000517514 C17orf102A2RUQ5 167 aa11.02□□□□□ -0.65
CLN8-202ENST00000517514 MYMKA6NI61 221 aa11.02□□□□□ -0.65
CLN8-202ENST00000517514 MAFO75444 373 aaPredicted RBP11.02□□□□□ -0.65
CLN8-202ENST00000517514 ZNF202O95125 648 aa11.02□□□□□ -0.65
CLN8-202ENST00000517514 CYP11B2P19099 503 aa11.02□□□□□ -0.65
CLN8-202ENST00000517514 CASP1P29466 404 aa11.02□□□□□ -0.65
CLN8-202ENST00000517514 RTP1P59025 263 aa11.02□□□□□ -0.65
CLN8-202ENST00000517514 MDM2Q00987 491 aaPredicted RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms