RNA–Protein interactions for RNA: ENST00000517211.2

RN7SKP40-201, Transcript of RNA, 7SK small nuclear pseudogene 40, humanhuman

BASIC

Gene RN7SKP40, Length 242 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP40-201ENST00000517211 NAP1L4Q99733 375 aaKnown RBP3.45□□□□□ -1.86
RN7SKP40-201ENST00000517211 TACO1Q9BSH4 297 aaKnown RBP3.45□□□□□ -1.86
RN7SKP40-201ENST00000517211 PCGF6Q9BYE7 350 aa3.45□□□□□ -1.86
RN7SKP40-201ENST00000517211 KIAA1683Q9H0B3 1180 aa3.45□□□□□ -1.86
RN7SKP40-201ENST00000517211 SPC25Q9HBM1 224 aa3.45□□□□□ -1.86
RN7SKP40-201ENST00000517211 VTI1BQ9UEU0 232 aa3.45□□□□□ -1.86
RN7SKP40-201ENST00000517211 CGGBP1Q9UFW8 167 aaPredicted RBP3.45□□□□□ -1.86
RN7SKP40-201ENST00000517211 X6R8D5 127 aa3.45□□□□□ -1.86
RN7SKP40-201ENST00000517211 SYNJ2O15056 1496 aa3.44□□□□□ -1.86
RN7SKP40-201ENST00000517211 A0A087WZG4 1122 aa3.44□□□□□ -1.86
RN7SKP40-201ENST00000517211 DNAJC9-AS1A6NH13 148 aa3.44□□□□□ -1.86
RN7SKP40-201ENST00000517211 HGSO14964 777 aaPredicted RBP3.44□□□□□ -1.86
RN7SKP40-201ENST00000517211 NR4A1P22736 598 aa3.44□□□□□ -1.86
RN7SKP40-201ENST00000517211 POU5F1Q01860 360 aaKnown RBP3.44□□□□□ -1.86
RN7SKP40-201ENST00000517211 TOB2Q14106 344 aaPredicted RBP3.44□□□□□ -1.86
RN7SKP40-201ENST00000517211 SAFB2Q14151 953 aaKnown RBP eCLIP3.44□□□□□ -1.86
RN7SKP40-201ENST00000517211 BMS1Q14692 1282 aaKnown RBP3.44□□□□□ -1.86
RN7SKP40-201ENST00000517211 ZNF568Q3ZCX4 644 aa3.44□□□□□ -1.86
RN7SKP40-201ENST00000517211 STEAP3Q658P3 488 aa3.44□□□□□ -1.86
RN7SKP40-201ENST00000517211 PCGF5Q86SE9 256 aa3.44□□□□□ -1.86
RN7SKP40-201ENST00000517211 REXO1L1PQ8IX06 675 aa3.44□□□□□ -1.86
RN7SKP40-201ENST00000517211 THEMISQ8N1K5 641 aaPredicted RBP3.44□□□□□ -1.86
RN7SKP40-201ENST00000517211 SLC43A3Q8NBI5 491 aa3.44□□□□□ -1.86
RN7SKP40-201ENST00000517211 TMEM87AQ8NBN3 555 aa3.44□□□□□ -1.86
RN7SKP40-201ENST00000517211 JDP2Q8WYK2 163 aa3.44□□□□□ -1.86
RN7SKP40-201ENST00000517211 MMP19Q99542 508 aa3.44□□□□□ -1.86
RN7SKP40-201ENST00000517211 CCSER2Q9H7U1 834 aa3.44□□□□□ -1.86
RN7SKP40-201ENST00000517211 METTL5Q9NRN9 209 aaKnown RBP3.44□□□□□ -1.86
RN7SKP40-201ENST00000517211 DDX56Q9NY93 547 aaKnown RBP3.44□□□□□ -1.86
RN7SKP40-201ENST00000517211 TCEAL9Q9UHQ7 104 aa3.44□□□□□ -1.86
RN7SKP40-201ENST00000517211 ESYT3A0FGR9 886 aa3.43□□□□□ -1.86
RN7SKP40-201ENST00000517211 CFAP69A5D8W1 941 aa3.43□□□□□ -1.86
RN7SKP40-201ENST00000517211 TTC36A6NLP5 189 aa3.43□□□□□ -1.86
RN7SKP40-201ENST00000517211 DNAJC6O75061 913 aa3.43□□□□□ -1.86
RN7SKP40-201ENST00000517211 RPS19P39019 145 aaKnown RBP3.43□□□□□ -1.86
RN7SKP40-201ENST00000517211 EVA1CP58658 441 aa3.43□□□□□ -1.86
RN7SKP40-201ENST00000517211 AMPD2Q01433 879 aa3.43□□□□□ -1.86
RN7SKP40-201ENST00000517211 CYP4F3Q08477 520 aa3.43□□□□□ -1.86
RN7SKP40-201ENST00000517211 GNL2Q13823 731 aaKnown RBP3.43□□□□□ -1.86
RN7SKP40-201ENST00000517211 CNGB1Q14028 1251 aaPredicted RBP3.43□□□□□ -1.86
RN7SKP40-201ENST00000517211 CCDC96Q2M329 555 aa3.43□□□□□ -1.86
RN7SKP40-201ENST00000517211 SOGA3Q5TF21 947 aa3.43□□□□□ -1.86
RN7SKP40-201ENST00000517211 HECTD2Q5U5R9 776 aa3.43□□□□□ -1.86
RN7SKP40-201ENST00000517211 INTS3Q68E01 1043 aaKnown RBP3.43□□□□□ -1.86
RN7SKP40-201ENST00000517211 VASNQ6EMK4 673 aa3.43□□□□□ -1.86
RN7SKP40-201ENST00000517211 CCSAPQ6IQ19 270 aaPredicted RBP3.43□□□□□ -1.86
RN7SKP40-201ENST00000517211 UNC5AQ6ZN44 842 aa3.43□□□□□ -1.86
RN7SKP40-201ENST00000517211 LARP4Q71RC2 724 aaKnown RBP eCLIP3.43□□□□□ -1.86
RN7SKP40-201ENST00000517211 RHOUQ7L0Q8 258 aa3.43□□□□□ -1.86
RN7SKP40-201ENST00000517211 NT5DC4Q86YG4 428 aa3.43□□□□□ -1.86
RN7SKP40-201ENST00000517211 PRPF38AQ8NAV1 312 aaKnown RBP3.43□□□□□ -1.86
RN7SKP40-201ENST00000517211 ZNF296Q8WUU4 475 aaPredicted RBP3.43□□□□□ -1.86
RN7SKP40-201ENST00000517211 CLEC4DQ8WXI8 215 aa3.43□□□□□ -1.86
RN7SKP40-201ENST00000517211 HAS1Q92839 578 aa3.43□□□□□ -1.86
RN7SKP40-201ENST00000517211 PDGFDQ9GZP0 370 aaPredicted RBP3.43□□□□□ -1.86
RN7SKP40-201ENST00000517211 OSBPL2Q9H1P3 480 aa3.43□□□□□ -1.86
RN7SKP40-201ENST00000517211 CAPN10Q9HC96 672 aa3.43□□□□□ -1.86
RN7SKP40-201ENST00000517211 KCNQ5Q9NR82 932 aa3.43□□□□□ -1.86
RN7SKP40-201ENST00000517211 IFT57Q9NWB7 429 aa3.43□□□□□ -1.86
RN7SKP40-201ENST00000517211 ASH2LQ9UBL3 628 aa3.43□□□□□ -1.86
RN7SKP40-201ENST00000517211 NUB1Q9Y5A7 615 aa3.43□□□□□ -1.86
RN7SKP40-201ENST00000517211 MRPL42Q9Y6G3 142 aaKnown RBP3.43□□□□□ -1.86
RN7SKP40-201ENST00000517211 ROBO2Q9HCK4 1378 aa3.42□□□□□ -1.86
RN7SKP40-201ENST00000517211 PLIN1O60240 522 aa3.42□□□□□ -1.86
RN7SKP40-201ENST00000517211 CD53P19397 219 aa3.42□□□□□ -1.86
RN7SKP40-201ENST00000517211 EIF4A3P38919 411 aaKnown RBP3.42□□□□□ -1.86
RN7SKP40-201ENST00000517211 FANCCQ00597 558 aa3.42□□□□□ -1.86
RN7SKP40-201ENST00000517211 POU5F1BQ06416 359 aa3.42□□□□□ -1.86
RN7SKP40-201ENST00000517211 LRRFIP1Q32MZ4 808 aaKnown RBP3.42□□□□□ -1.86
RN7SKP40-201ENST00000517211 CCDC103Q8IW40 242 aa3.42□□□□□ -1.86
RN7SKP40-201ENST00000517211 PDILTQ8N807 584 aa3.42□□□□□ -1.86
RN7SKP40-201ENST00000517211 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.42□□□□□ -1.86
RN7SKP40-201ENST00000517211 COPS5Q92905 334 aa3.42□□□□□ -1.86
RN7SKP40-201ENST00000517211 RNF34Q969K3 372 aa3.42□□□□□ -1.86
RN7SKP40-201ENST00000517211 HAUS7Q99871 368 aa3.42□□□□□ -1.86
RN7SKP40-201ENST00000517211 ANP32EQ9BTT0 268 aa3.42□□□□□ -1.86
RN7SKP40-201ENST00000517211 TGIF2Q9GZN2 237 aa3.42□□□□□ -1.86
RN7SKP40-201ENST00000517211 KLHL25Q9H0H3 589 aa3.42□□□□□ -1.86
RN7SKP40-201ENST00000517211 GEMIN8Q9NWZ8 242 aaKnown RBP3.42□□□□□ -1.86
RN7SKP40-201ENST00000517211 ARHGAP20Q9P2F6 1191 aa3.42□□□□□ -1.86
RN7SKP40-201ENST00000517211 SH3BP1Q9Y3L3 701 aa3.42□□□□□ -1.86
RN7SKP40-201ENST00000517211 THOC2Q8NI27 1593 aaKnown RBP3.42□□□□□ -1.86
RN7SKP40-201ENST00000517211 TRBV23OR9-2A0A075B6M9 112 aa3.41□□□□□ -1.86
RN7SKP40-201ENST00000517211 ARHGAP6O43182 974 aa3.41□□□□□ -1.86
RN7SKP40-201ENST00000517211 HOXB6P17509 224 aaKnown RBP3.41□□□□□ -1.86
RN7SKP40-201ENST00000517211 POLD1P28340 1107 aa3.41□□□□□ -1.86
RN7SKP40-201ENST00000517211 MAN1A1P33908 653 aa3.41□□□□□ -1.86
RN7SKP40-201ENST00000517211 ZNF76P36508 570 aa3.41□□□□□ -1.86
RN7SKP40-201ENST00000517211 PFKPQ01813 784 aa3.41□□□□□ -1.86
RN7SKP40-201ENST00000517211 FOXF2Q12947 444 aa3.41□□□□□ -1.86
RN7SKP40-201ENST00000517211 TOP3AQ13472 1001 aaPredicted RBP3.41□□□□□ -1.86
RN7SKP40-201ENST00000517211 UBE4AQ14139 1066 aa3.41□□□□□ -1.86
RN7SKP40-201ENST00000517211 DHX8Q14562 1220 aaKnown RBP3.41□□□□□ -1.86
RN7SKP40-201ENST00000517211 ODR4Q5SWX8 454 aa3.41□□□□□ -1.86
RN7SKP40-201ENST00000517211 L1TD1Q5T7N2 865 aaKnown RBP3.41□□□□□ -1.86
RN7SKP40-201ENST00000517211 ICE2Q659A1 982 aa3.41□□□□□ -1.86
RN7SKP40-201ENST00000517211 ADAT2Q7Z6V5 191 aaKnown RBP3.41□□□□□ -1.86
RN7SKP40-201ENST00000517211 METTL16Q86W50 562 aaKnown RBP3.41□□□□□ -1.86
RN7SKP40-201ENST00000517211 REXO1Q8N1G1 1221 aaKnown RBP3.41□□□□□ -1.86
RN7SKP40-201ENST00000517211 Q8N1Y9 231 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms