RNA–Protein interactions for RNA: ENST00000515708.5

TSPAN17-209, Transcript of tetraspanin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN17, Length 2,361 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-209ENST00000515708 SIX2Q9NPC8 291 aa18.36■□□□□ 0.53
TSPAN17-209ENST00000515708 DNM3Q9UQ16 869 aa18.36■□□□□ 0.53
TSPAN17-209ENST00000515708 SRRM3A6NNA2 597 aaPredicted RBP18.35■□□□□ 0.53
TSPAN17-209ENST00000515708 TMCO5BA8MYB1 307 aa18.35■□□□□ 0.53
TSPAN17-209ENST00000515708 CCDC188H7C350 402 aa18.35■□□□□ 0.53
TSPAN17-209ENST00000515708 KRIT1O00522 736 aa18.35■□□□□ 0.53
TSPAN17-209ENST00000515708 SPATA31C1P0DKV0 1188 aa18.35■□□□□ 0.53
TSPAN17-209ENST00000515708 RPA1P27694 616 aa18.35■□□□□ 0.53
TSPAN17-209ENST00000515708 PRR16Q569H4 304 aa18.35■□□□□ 0.53
TSPAN17-209ENST00000515708 TCERG1LQ5VWI1 586 aa18.35■□□□□ 0.53
TSPAN17-209ENST00000515708 MICALCLQ6ZW33 695 aa18.35■□□□□ 0.53
TSPAN17-209ENST00000515708 PROCA1Q8NCQ7 364 aaPredicted RBP18.35■□□□□ 0.53
TSPAN17-209ENST00000515708 CRYGNQ8WXF5 182 aa18.35■□□□□ 0.53
TSPAN17-209ENST00000515708 SLC35C1Q96A29 364 aa18.35■□□□□ 0.53
TSPAN17-209ENST00000515708 MEIS2O14770 477 aa18.35■□□□□ 0.53
TSPAN17-209ENST00000515708 FAM107AO95990 144 aa18.35■□□□□ 0.53
TSPAN17-209ENST00000515708 NR3C1P04150 777 aa18.35■□□□□ 0.53
TSPAN17-209ENST00000515708 H2AFZP0C0S5 128 aa18.35■□□□□ 0.53
TSPAN17-209ENST00000515708 CTNNA1P35221 906 aaKnown RBP18.35■□□□□ 0.53
TSPAN17-209ENST00000515708 ARHGAP4P98171 946 aa18.35■□□□□ 0.53
TSPAN17-209ENST00000515708 ZNF844Q08AG5 666 aa18.35■□□□□ 0.53
TSPAN17-209ENST00000515708 H2AFVQ71UI9 128 aa18.35■□□□□ 0.53
TSPAN17-209ENST00000515708 YTHDF3Q7Z739 585 aaKnown RBP18.35■□□□□ 0.53
TSPAN17-209ENST00000515708 VPS36Q86VN1 386 aa18.35■□□□□ 0.53
TSPAN17-209ENST00000515708 RASGEF1CQ8N431 466 aa18.35■□□□□ 0.53
TSPAN17-209ENST00000515708 ARFGAP2Q8N6H7 521 aa18.35■□□□□ 0.53
TSPAN17-209ENST00000515708 ERMNQ8TAM6 284 aa18.35■□□□□ 0.53
TSPAN17-209ENST00000515708 MXD3Q9BW11 206 aa18.35■□□□□ 0.53
TSPAN17-209ENST00000515708 STXBP5LQ9Y2K9 1186 aa18.35■□□□□ 0.53
TSPAN17-209ENST00000515708 A0A0A6YYK5 440 aaPredicted RBP18.34■□□□□ 0.53
TSPAN17-209ENST00000515708 ASTN1O14525 1302 aa18.34■□□□□ 0.53
TSPAN17-209ENST00000515708 BBOX1O75936 387 aa18.34■□□□□ 0.53
TSPAN17-209ENST00000515708 ITGA4P13612 1032 aa18.34■□□□□ 0.53
TSPAN17-209ENST00000515708 CASP4P49662 377 aa18.34■□□□□ 0.53
TSPAN17-209ENST00000515708 FAM196AQ6ZSG2 479 aa18.34■□□□□ 0.53
TSPAN17-209ENST00000515708 CNPY4Q8N129 248 aa18.34■□□□□ 0.53
TSPAN17-209ENST00000515708 LMBR1Q8WVP7 490 aa18.34■□□□□ 0.53
TSPAN17-209ENST00000515708 P2RX7Q99572 595 aaKnown RBP18.34■□□□□ 0.53
TSPAN17-209ENST00000515708 METTL14Q9HCE5 456 aaKnown RBP18.34■□□□□ 0.53
TSPAN17-209ENST00000515708 TYW1Q9NV66 732 aaKnown RBP18.34■□□□□ 0.53
TSPAN17-209ENST00000515708 USP40Q9NVE5 1235 aa18.34■□□□□ 0.53
TSPAN17-209ENST00000515708 GCNT4Q9P109 453 aa18.34■□□□□ 0.53
TSPAN17-209ENST00000515708 SUCLA2Q9P2R7 463 aaPredicted RBP18.34■□□□□ 0.53
TSPAN17-209ENST00000515708 AMACRQ9UHK6 382 aa18.34■□□□□ 0.53
TSPAN17-209ENST00000515708 CAPN7Q9Y6W3 813 aa18.34■□□□□ 0.53
TSPAN17-209ENST00000515708 DDX3XO00571 662 aaKnown RBP eCLIP18.34■□□□□ 0.531e-8■■■■■ 31.1
TSPAN17-209ENST00000515708 FSBPO95073 299 aa18.34■□□□□ 0.53
TSPAN17-209ENST00000515708 SLURP2P0DP57 97 aa18.34■□□□□ 0.53
TSPAN17-209ENST00000515708 GUCY2CP25092 1073 aa18.34■□□□□ 0.53
TSPAN17-209ENST00000515708 HNRNPH1P31943 449 aaKnown RBP18.34■□□□□ 0.53
TSPAN17-209ENST00000515708 FNTAP49354 379 aa18.34■□□□□ 0.53
TSPAN17-209ENST00000515708 HDLBPQ00341 1268 aaKnown RBP18.34■□□□□ 0.53
TSPAN17-209ENST00000515708 AP3B2Q13367 1082 aa18.34■□□□□ 0.53
TSPAN17-209ENST00000515708 BMT2Q1RMZ1 405 aa18.34■□□□□ 0.53
TSPAN17-209ENST00000515708 KCNV1Q6PIU1 500 aa18.34■□□□□ 0.53
TSPAN17-209ENST00000515708 RSPH10B2B2RC85 870 aa18.33■□□□□ 0.53
TSPAN17-209ENST00000515708 E7EVH7 732 aa18.33■□□□□ 0.53
TSPAN17-209ENST00000515708 TBX3O15119 743 aa18.33■□□□□ 0.53
TSPAN17-209ENST00000515708 SLC16A3O15427 465 aaKnown RBP18.33■□□□□ 0.53
TSPAN17-209ENST00000515708 RAD21O60216 631 aa18.33■□□□□ 0.53
TSPAN17-209ENST00000515708 RSPH10BP0C881 870 aa18.33■□□□□ 0.53
TSPAN17-209ENST00000515708 RPL13P26373 211 aaKnown RBP18.33■□□□□ 0.53
TSPAN17-209ENST00000515708 GJB7Q6PEY0 223 aa18.33■□□□□ 0.53
TSPAN17-209ENST00000515708 DAAM2Q86T65 1068 aa18.33■□□□□ 0.53
TSPAN17-209ENST00000515708 NT5DC3Q86UY8 548 aa18.33■□□□□ 0.53
TSPAN17-209ENST00000515708 SEPT12Q8IYM1 358 aa18.33■□□□□ 0.53
TSPAN17-209ENST00000515708 CERS5Q8N5B7 392 aa18.33■□□□□ 0.53
TSPAN17-209ENST00000515708 PRPF38AQ8NAV1 312 aaKnown RBP18.33■□□□□ 0.53
TSPAN17-209ENST00000515708 SLITRK6Q9H5Y7 841 aa18.33■□□□□ 0.53
TSPAN17-209ENST00000515708 INTUQ9ULD6 942 aa18.33■□□□□ 0.53
TSPAN17-209ENST00000515708 MYO1FO00160 1098 aa18.33■□□□□ 0.52
TSPAN17-209ENST00000515708 DAPK3O43293 454 aa18.33■□□□□ 0.52
TSPAN17-209ENST00000515708 FLT3P36888 993 aa18.33■□□□□ 0.52
TSPAN17-209ENST00000515708 BIRC3Q13489 604 aa18.33■□□□□ 0.52
TSPAN17-209ENST00000515708 SYCE1Q8N0S2 351 aa18.33■□□□□ 0.52
TSPAN17-209ENST00000515708 LENG9Q96B70 501 aa18.33■□□□□ 0.52
TSPAN17-209ENST00000515708 SLC12A6Q9UHW9 1150 aa18.33■□□□□ 0.52
TSPAN17-209ENST00000515708 SUGT1Q9Y2Z0 365 aa18.33■□□□□ 0.52
TSPAN17-209ENST00000515708 NPEPPSP55786 919 aa18.32■□□□□ 0.52
TSPAN17-209ENST00000515708 KCTD19Q17RG1 926 aaPredicted RBP18.32■□□□□ 0.52
TSPAN17-209ENST00000515708 Q4G0T1 1027 aa18.32■□□□□ 0.52
TSPAN17-209ENST00000515708 RUFY4Q6ZNE9 571 aa18.32■□□□□ 0.52
TSPAN17-209ENST00000515708 HES6Q96HZ4 224 aa18.32■□□□□ 0.52
TSPAN17-209ENST00000515708 PPANQ9NQ55 473 aaKnown RBP18.32■□□□□ 0.52
TSPAN17-209ENST00000515708 GGA2Q9UJY4 613 aa18.32■□□□□ 0.52
TSPAN17-209ENST00000515708 GTPBP10A4D1E9 387 aaKnown RBP18.32■□□□□ 0.52
TSPAN17-209ENST00000515708 HLA-DOAP06340 250 aa18.32■□□□□ 0.52
TSPAN17-209ENST00000515708 KCNA1Q09470 495 aa18.32■□□□□ 0.52
TSPAN17-209ENST00000515708 MTMR3Q13615 1198 aa18.32■□□□□ 0.52
TSPAN17-209ENST00000515708 MCTP2Q6DN12 878 aa18.32■□□□□ 0.52
TSPAN17-209ENST00000515708 U2AF1L4Q8WU68 220 aaKnown RBP18.32■□□□□ 0.52
TSPAN17-209ENST00000515708 UBLCP1Q8WVY7 318 aaPredicted RBP18.32■□□□□ 0.52
TSPAN17-209ENST00000515708 SEC14L1Q92503 715 aa18.32■□□□□ 0.52
TSPAN17-209ENST00000515708 BCAS3Q9H6U6 928 aa18.32■□□□□ 0.52
TSPAN17-209ENST00000515708 LY75O60449 1722 aa18.31■□□□□ 0.52
TSPAN17-209ENST00000515708 LTBP1Q14766 1721 aa18.31■□□□□ 0.52
TSPAN17-209ENST00000515708 FAM86B1E9PN63 330 aa18.31■□□□□ 0.52
TSPAN17-209ENST00000515708 RIMBP2O15034 1052 aa18.31■□□□□ 0.52
TSPAN17-209ENST00000515708 CLIC2O15247 247 aa18.31■□□□□ 0.52
TSPAN17-209ENST00000515708 TTI1O43156 1089 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms