RNA–Protein interactions for RNA: ENST00000514267.1

CALCOCO2-223, Transcript of calcium binding and coiled-coil domain 2, human

TSL 2

Gene CALCOCO2, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-223	ENST00000514267	MYRF	Q9Y2G1	1151 aa		4.6	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	BLACE	A4D250	179 aa		4.59	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	CRTAM	O95727	393 aa		4.59	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	KNG1	P01042	644 aa		4.59	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	CKM	P06732	381 aa		4.59	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	JMJD7	P0C870	316 aa		4.59	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	BPI	P17213	487 aa		4.59	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	PPP2CB	P62714	309 aa		4.59	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	PPP2CA	P67775	309 aa		4.59	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	LACTB	P83111	547 aa	Predicted RBP	4.59	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	GRIN1	Q05586	938 aa		4.59	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	DBP	Q10586	325 aa	Predicted RBP	4.59	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	STRN3	Q13033	797 aa		4.59	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	TTF1	Q15361	905 aa	Predicted RBP	4.59	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	PCBP1	Q15365	356 aa	Known RBP eCLIP	4.59	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	NFE2	Q16621	373 aa	Predicted RBP	4.59	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	4.59	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	HS1BP3	Q53T59	392 aa		4.59	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	CDCA2	Q69YH5	1023 aa	Predicted RBP	4.59	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	ZCCHC8	Q6NZY4	707 aa	Known RBP	4.59	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	HHIPL2	Q6UWX4	724 aa		4.59	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	ARHGAP36	Q6ZRI8	547 aa		4.59	□□□□□ -1.67
CALCOCO2-223	ENST00000514267		Q6ZUG5	572 aa		4.59	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	STRA8	Q7Z7C7	330 aa		4.59	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	DDX53	Q86TM3	631 aa	Known RBP	4.59	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	STK32C	Q86UX6	486 aa		4.59	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	PROSER1	Q86XN7	944 aa		4.59	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	SPATS2	Q86XZ4	545 aa	Known RBP	4.59	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	OR2W6P	Q8NHA6	318 aa		4.59	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	ZCCHC14	Q8WYQ9	949 aa	Known RBP	4.59	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	USP7	Q93009	1102 aa		4.59	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	E2F7	Q96AV8	911 aa		4.59	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	TTC1	Q99614	292 aa		4.59	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	C1QTNF3	Q9BXJ4	246 aa		4.59	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	CELF4	Q9BZC1	486 aa	Known RBP	4.59	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	IFT22	Q9H7X7	185 aa		4.59	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	JADE2	Q9NQC1	790 aa		4.59	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	KCND1	Q9NSA2	647 aa		4.59	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	SLC5A4	Q9NY91	659 aa		4.59	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	APOBEC2	Q9Y235	224 aa	Known RBP	4.59	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	TRAF6	Q9Y4K3	522 aa		4.59	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	SPEF1	Q9Y4P9	236 aa		4.59	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	DUSP10	Q9Y6W6	482 aa		4.59	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	CCDC194	A0A1B0GVG4	234 aa		4.58	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	E2F8	A0AVK6	867 aa		4.58	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	CCDC66	A2RUB6	948 aa		4.58	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	NPEPPSL1	A6NEC2	478 aa		4.58	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	C1QTNF3-AMACR	E9PGA6	284 aa		4.58	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	KIF3B	O15066	747 aa		4.58	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	NKRF	O15226	690 aa	Known RBP eCLIP	4.58	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	HIP1R	O75146	1068 aa		4.58	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	RASGRP1	O95267	797 aa		4.58	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	COL6A2	P12110	1019 aa		4.58	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	POLD1	P28340	1107 aa		4.58	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	SCNN1B	P51168	640 aa		4.58	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	MLLT6	P55198	1093 aa	Predicted RBP	4.58	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	PFKP	Q01813	784 aa		4.58	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	FAM50A	Q14320	339 aa	Known RBP	4.58	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	ZNF460	Q14592	562 aa		4.58	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	USP10	Q14694	798 aa	Known RBP	4.58	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	STAT4	Q14765	748 aa		4.58	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	ARHGAP44	Q17R89	818 aa		4.58	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	ZMAT1	Q5H9K5	638 aa		4.58	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	CPZ	Q66K79	652 aa		4.58	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	CCAR1	Q8IX12	1150 aa	Known RBP	4.58	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	DVL3	Q92997	716 aa	Predicted RBP	4.58	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	WNK4	Q96J92	1243 aa		4.58	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	LOXL4	Q96JB6	756 aa		4.58	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	CAMKK2	Q96RR4	588 aa		4.58	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	RBM15	Q96T37	977 aa	Known RBP eCLIP	4.58	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	CARD11	Q9BXL7	1154 aa		4.58	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	ASPSCR1	Q9BZE9	553 aa		4.58	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	RIC8B	Q9NVN3	520 aa		4.58	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	ASXL2	Q76L83	1435 aa		4.57	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	ZNF561-AS1	K7EIQ3	104 aa		4.57	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	B4GALT3	O60512	393 aa		4.57	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	KPNA6	O60684	536 aa		4.57	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	MAF	O75444	373 aa	Predicted RBP	4.57	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	KLHL18	O94889	574 aa		4.57	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	COL6A1	P12109	1028 aa		4.57	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	PDE6A	P16499	860 aa		4.57	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	AOAH	P28039	575 aa		4.57	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	NEK2	P51955	445 aa		4.57	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	MCL1	Q07820	350 aa		4.57	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	MAP3K12	Q12852	859 aa		4.57	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	FAP	Q12884	760 aa		4.57	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	SEPT7	Q16181	437 aa	Known RBP	4.57	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	CALML6	Q8TD86	181 aa		4.57	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	MBD6	Q96DN6	1003 aa		4.57	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	MENT	Q9BUN1	341 aa		4.57	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	KATNBL1	Q9H079	304 aa		4.57	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	4.57	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	TCAF1	Q9Y4C2	921 aa		4.57	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	PCDHA8	Q9Y5H6	950 aa		4.57	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	SLC4A7	Q9Y6M7	1214 aa		4.57	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	ARID4B	Q4LE39	1312 aa	Predicted RBP	4.56	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	PRAMEF25	A6NGN4	478 aa		4.56	□□□□□ -1.68
CALCOCO2-223	ENST00000514267		K7ESF4	209 aa		4.56	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	CBX4	O00257	560 aa		4.56	□□□□□ -1.68
CALCOCO2-223	ENST00000514267	MAN2B1	O00754	1011 aa		4.56	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms