RNA–Protein interactions for RNA: ENST00000513989.5

NEDD9-214, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 4

Gene NEDD9, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-214ENST00000513989 YWHABP31946 246 aaKnown RBP11.33□□□□□ -0.6
NEDD9-214ENST00000513989 STAT6P42226 847 aa11.33□□□□□ -0.6
NEDD9-214ENST00000513989 C9orf50Q5SZB4 431 aa11.33□□□□□ -0.6
NEDD9-214ENST00000513989 HYIQ5T013 277 aa11.33□□□□□ -0.6
NEDD9-214ENST00000513989 C1orf53Q5VUE5 145 aa11.33□□□□□ -0.6
NEDD9-214ENST00000513989 POTEBQ6S5H4 581 aa11.33□□□□□ -0.6
NEDD9-214ENST00000513989 SV2BQ7L1I2 683 aa11.33□□□□□ -0.6
NEDD9-214ENST00000513989 SLC17A8Q8NDX2 589 aa11.33□□□□□ -0.6
NEDD9-214ENST00000513989 BBXQ8WY36 941 aaPredicted RBP11.33□□□□□ -0.6
NEDD9-214ENST00000513989 TRIM43Q96BQ3 446 aaPredicted RBP11.33□□□□□ -0.6
NEDD9-214ENST00000513989 GLT1D1Q96MS3 346 aa11.33□□□□□ -0.6
NEDD9-214ENST00000513989 GUCD1Q96NT3 240 aa11.33□□□□□ -0.6
NEDD9-214ENST00000513989 JPH2Q9BR39 696 aaPredicted RBP11.33□□□□□ -0.6
NEDD9-214ENST00000513989 ANKEF1Q9NU02 776 aa11.33□□□□□ -0.6
NEDD9-214ENST00000513989 DDX19AQ9NUU7 478 aaKnown RBP11.33□□□□□ -0.6
NEDD9-214ENST00000513989 TRPC6Q9Y210 931 aa11.33□□□□□ -0.6
NEDD9-214ENST00000513989 STXBP5LQ9Y2K9 1186 aa11.33□□□□□ -0.6
NEDD9-214ENST00000513989 EMSYQ7Z589 1322 aa11.33□□□□□ -0.6
NEDD9-214ENST00000513989 FAM237AA0A1B0GTK4 181 aa11.32□□□□□ -0.6
NEDD9-214ENST00000513989 ARHGEF35A5YM69 484 aa11.32□□□□□ -0.6
NEDD9-214ENST00000513989 RRN3P2A6NIE6 340 aa11.32□□□□□ -0.6
NEDD9-214ENST00000513989 MED24O75448 989 aa11.32□□□□□ -0.6
NEDD9-214ENST00000513989 MBD3O95983 291 aa11.32□□□□□ -0.6
NEDD9-214ENST00000513989 OATP04181 439 aa11.32□□□□□ -0.6
NEDD9-214ENST00000513989 SPATA31C1P0DKV0 1188 aa11.32□□□□□ -0.6
NEDD9-214ENST00000513989 PFKFB1P16118 471 aa11.32□□□□□ -0.6
NEDD9-214ENST00000513989 ACLYP53396 1101 aa11.32□□□□□ -0.6
NEDD9-214ENST00000513989 CHMP4BP1P59074 171 aa11.32□□□□□ -0.6
NEDD9-214ENST00000513989 PURAQ00577 322 aaKnown RBP11.32□□□□□ -0.6
NEDD9-214ENST00000513989 FAM160A1Q05DH4 1040 aa11.32□□□□□ -0.6
NEDD9-214ENST00000513989 MFSD10Q14728 455 aa11.32□□□□□ -0.6
NEDD9-214ENST00000513989 KARSQ15046 597 aaKnown RBP11.32□□□□□ -0.6
NEDD9-214ENST00000513989 SHHQ15465 462 aa11.32□□□□□ -0.6
NEDD9-214ENST00000513989 KIAA0753Q2KHM9 967 aa11.32□□□□□ -0.6
NEDD9-214ENST00000513989 SKOR2Q2VWA4 1001 aaPredicted RBP11.32□□□□□ -0.6
NEDD9-214ENST00000513989 ZNF484Q5JVG2 852 aa11.32□□□□□ -0.6
NEDD9-214ENST00000513989 TRMT1LQ7Z2T5 733 aaKnown RBP11.32□□□□□ -0.6
NEDD9-214ENST00000513989 CCDC60Q8IWA6 550 aaPredicted RBP11.32□□□□□ -0.6
NEDD9-214ENST00000513989 PDILTQ8N807 584 aa11.32□□□□□ -0.6
NEDD9-214ENST00000513989 C7orf31Q8N865 590 aa11.32□□□□□ -0.6
NEDD9-214ENST00000513989 ATP8B4Q8TF62 1192 aa11.32□□□□□ -0.6
NEDD9-214ENST00000513989 CEP170P1Q96L14 293 aa11.32□□□□□ -0.6
NEDD9-214ENST00000513989 PLIN2Q99541 437 aa11.32□□□□□ -0.6
NEDD9-214ENST00000513989 C16orf70Q9BSU1 422 aa11.32□□□□□ -0.6
NEDD9-214ENST00000513989 MMTAG2Q9BU76 263 aaKnown RBP11.32□□□□□ -0.6
NEDD9-214ENST00000513989 NIFKQ9BYG3 293 aaKnown RBP11.32□□□□□ -0.6
NEDD9-214ENST00000513989 MAGEF1Q9HAY2 307 aa11.32□□□□□ -0.6
NEDD9-214ENST00000513989 LMBRD1Q9NUN5 540 aa11.32□□□□□ -0.6
NEDD9-214ENST00000513989 STK17AQ9UEE5 414 aa11.32□□□□□ -0.6
NEDD9-214ENST00000513989 DBR1Q9UK59 544 aaKnown RBP11.32□□□□□ -0.6
NEDD9-214ENST00000513989 TRANK1O15050 2925 aa11.31□□□□□ -0.6
NEDD9-214ENST00000513989 CTAGE5O15320 804 aa11.31□□□□□ -0.6
NEDD9-214ENST00000513989 KINO60870 393 aaKnown RBP11.31□□□□□ -0.6
NEDD9-214ENST00000513989 GADD45BO75293 160 aaPredicted RBP11.31□□□□□ -0.6
NEDD9-214ENST00000513989 ZNF202O95125 648 aa11.31□□□□□ -0.6
NEDD9-214ENST00000513989 EYA4O95677 639 aa11.31□□□□□ -0.6
NEDD9-214ENST00000513989 F2P00734 622 aa11.31□□□□□ -0.6
NEDD9-214ENST00000513989 SLFN14P0C7P3 912 aa11.31□□□□□ -0.6
NEDD9-214ENST00000513989 ZNF286BP0CG31 522 aa11.31□□□□□ -0.6
NEDD9-214ENST00000513989 PLCG1P19174 1290 aa11.31□□□□□ -0.6
NEDD9-214ENST00000513989 PTGS1P23219 599 aa11.31□□□□□ -0.6
NEDD9-214ENST00000513989 MARK3P27448 753 aa11.31□□□□□ -0.6
NEDD9-214ENST00000513989 PSEN2P49810 448 aa11.31□□□□□ -0.6
NEDD9-214ENST00000513989 NDUFA8P51970 172 aa11.31□□□□□ -0.6
NEDD9-214ENST00000513989 IRX5P78411 483 aaPredicted RBP11.31□□□□□ -0.6
NEDD9-214ENST00000513989 PRKCEQ02156 737 aa11.31□□□□□ -0.6
NEDD9-214ENST00000513989 GRB10Q13322 594 aa11.31□□□□□ -0.6
NEDD9-214ENST00000513989 PLCB4Q15147 1175 aa11.31□□□□□ -0.6
NEDD9-214ENST00000513989 TMEM119Q4V9L6 283 aa11.31□□□□□ -0.6
NEDD9-214ENST00000513989 XKR9Q5GH70 373 aa11.31□□□□□ -0.6
NEDD9-214ENST00000513989 FAM109BQ6ICB4 259 aaPredicted RBP11.31□□□□□ -0.6
NEDD9-214ENST00000513989 CCSAPQ6IQ19 270 aaPredicted RBP11.31□□□□□ -0.6
NEDD9-214ENST00000513989 CXCL17Q6UXB2 119 aa11.31□□□□□ -0.6
NEDD9-214ENST00000513989 USP49Q70CQ1 688 aa11.31□□□□□ -0.6
NEDD9-214ENST00000513989 RETREG2Q8NC44 543 aa11.31□□□□□ -0.6
NEDD9-214ENST00000513989 CNNM3Q8NE01 707 aa11.31□□□□□ -0.6
NEDD9-214ENST00000513989 PIGOQ8TEQ8 1089 aa11.31□□□□□ -0.6
NEDD9-214ENST00000513989 BADQ92934 168 aa11.31□□□□□ -0.6
NEDD9-214ENST00000513989 DHX58Q96C10 678 aa11.31□□□□□ -0.6
NEDD9-214ENST00000513989 TIGD1Q96MW7 591 aa11.31□□□□□ -0.6
NEDD9-214ENST00000513989 PCYT2Q99447 389 aa11.31□□□□□ -0.6
NEDD9-214ENST00000513989 SEPT9Q9UHD8 586 aaPredicted RBP11.31□□□□□ -0.6
NEDD9-214ENST00000513989 HPSEQ9Y251 543 aa11.31□□□□□ -0.6
NEDD9-214ENST00000513989 NCOR1O75376 2440 aa11.31□□□□□ -0.6
NEDD9-214ENST00000513989 NRCAMQ92823 1304 aa11.31□□□□□ -0.6
NEDD9-214ENST00000513989 A0A1W2PQ45 241 aaPredicted RBP11.3□□□□□ -0.6
NEDD9-214ENST00000513989 A0A1W2PQY0 241 aa11.3□□□□□ -0.6
NEDD9-214ENST00000513989 MYADML2A6NDP7 307 aa11.3□□□□□ -0.6
NEDD9-214ENST00000513989 MAGEB2O15479 319 aa11.3□□□□□ -0.6
NEDD9-214ENST00000513989 SSBP05455 408 aaKnown RBP eCLIP11.3□□□□□ -0.6
NEDD9-214ENST00000513989 KRT18P05783 430 aaKnown RBP11.3□□□□□ -0.6
NEDD9-214ENST00000513989 PLA2G4BP0C869 781 aa11.3□□□□□ -0.6
NEDD9-214ENST00000513989 TMOD1P28289 359 aa11.3□□□□□ -0.6
NEDD9-214ENST00000513989 DNM2P50570 870 aa11.3□□□□□ -0.6
NEDD9-214ENST00000513989 EPHB4P54760 987 aa11.3□□□□□ -0.6
NEDD9-214ENST00000513989 TLE2Q04725 743 aa11.3□□□□□ -0.6
NEDD9-214ENST00000513989 PTPN11Q06124 597 aaPredicted RBP11.3□□□□□ -0.6
NEDD9-214ENST00000513989 PPFIA1Q13136 1202 aa11.3□□□□□ -0.6
NEDD9-214ENST00000513989 NFRKBQ6P4R8 1299 aa11.3□□□□□ -0.6
NEDD9-214ENST00000513989 POTEGQ6S5H5 508 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms