RNA–Protein interactions for RNA: ENST00000513725.1

SFXN1-210, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-210ENST00000513725 CXCL14O95715 111 aa13.82□□□□□ -0.2
SFXN1-210ENST00000513725 RPLP2P05387 115 aaKnown RBP13.82□□□□□ -0.2
SFXN1-210ENST00000513725 UBA1P22314 1058 aaKnown RBP13.82□□□□□ -0.2
SFXN1-210ENST00000513725 PDE4AP27815 886 aa13.82□□□□□ -0.2
SFXN1-210ENST00000513725 NRLP54845 237 aa13.82□□□□□ -0.2
SFXN1-210ENST00000513725 MRPS6P82932 125 aaKnown RBP13.82□□□□□ -0.2
SFXN1-210ENST00000513725 UBXN2BQ14CS0 331 aa13.82□□□□□ -0.2
SFXN1-210ENST00000513725 USH1GQ495M9 461 aa13.82□□□□□ -0.2
SFXN1-210ENST00000513725 AASDHQ4L235 1098 aaPredicted RBP13.82□□□□□ -0.2
SFXN1-210ENST00000513725 IER5Q5VY09 327 aa13.82□□□□□ -0.2
SFXN1-210ENST00000513725 KCNT2Q6UVM3 1135 aa13.82□□□□□ -0.2
SFXN1-210ENST00000513725 ERC1Q8IUD2 1116 aa13.82□□□□□ -0.2
SFXN1-210ENST00000513725 LURAP1LQ8IV03 231 aa13.82□□□□□ -0.2
SFXN1-210ENST00000513725 DNAJB3Q8WWF6 145 aa13.82□□□□□ -0.2
SFXN1-210ENST00000513725 STAMQ92783 540 aa13.82□□□□□ -0.2
SFXN1-210ENST00000513725 GPCPD1Q9NPB8 672 aa13.82□□□□□ -0.2
SFXN1-210ENST00000513725 SPG21Q9NZD8 308 aa13.82□□□□□ -0.2
SFXN1-210ENST00000513725 EPS15L1Q9UBC2 864 aa13.82□□□□□ -0.2
SFXN1-210ENST00000513725 DMXL2Q8TDJ6 3036 aa13.81□□□□□ -0.2
SFXN1-210ENST00000513725 CYSRT1A8MQ03 144 aa13.81□□□□□ -0.2
SFXN1-210ENST00000513725 CHGBP05060 677 aa13.81□□□□□ -0.2
SFXN1-210ENST00000513725 SLC3A2P08195 630 aaKnown RBP13.81□□□□□ -0.2
SFXN1-210ENST00000513725 SP2Q02086 613 aa13.81□□□□□ -0.2
SFXN1-210ENST00000513725 C15orf39Q6ZRI6 1047 aa13.81□□□□□ -0.2
SFXN1-210ENST00000513725 FAM43BQ6ZT52 329 aaPredicted RBP13.81□□□□□ -0.2
SFXN1-210ENST00000513725 MCF2L2Q86YR7 1114 aa13.81□□□□□ -0.2
SFXN1-210ENST00000513725 TBC1D5Q92609 795 aa13.81□□□□□ -0.2
SFXN1-210ENST00000513725 ARHGAP45Q92619 1136 aa13.81□□□□□ -0.2
SFXN1-210ENST00000513725 LOXHD1Q8IVV2 1947 aa13.81□□□□□ -0.2
SFXN1-210ENST00000513725 FRMPD2Q68DX3 1309 aaPredicted RBP13.81□□□□□ -0.2
SFXN1-210ENST00000513725 RALGAPA1Q6GYQ0 2036 aa13.81□□□□□ -0.2
SFXN1-210ENST00000513725 IGSF10Q6WRI0 2623 aa13.8□□□□□ -0.2
SFXN1-210ENST00000513725 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.8□□□□□ -0.2
SFXN1-210ENST00000513725 FAM170BA6NMN3 283 aa13.8□□□□□ -0.2
SFXN1-210ENST00000513725 M0QZ92 97 aa13.8□□□□□ -0.2
SFXN1-210ENST00000513725 N4BP1O75113 896 aaKnown RBP13.8□□□□□ -0.2
SFXN1-210ENST00000513725 FOXC1Q12948 553 aa13.8□□□□□ -0.2
SFXN1-210ENST00000513725 GIT2Q14161 759 aa13.8□□□□□ -0.2
SFXN1-210ENST00000513725 PPFIBP1Q86W92 1011 aa13.8□□□□□ -0.2
SFXN1-210ENST00000513725 FEZF2Q8TBJ5 459 aa13.8□□□□□ -0.2
SFXN1-210ENST00000513725 SLC22A17Q8WUG5 538 aa13.8□□□□□ -0.2
SFXN1-210ENST00000513725 GATA6Q92908 595 aa13.8□□□□□ -0.2
SFXN1-210ENST00000513725 PRMT8Q9NR22 394 aaPredicted RBP13.8□□□□□ -0.2
SFXN1-210ENST00000513725 PXMP2Q9NR77 195 aa13.8□□□□□ -0.2
SFXN1-210ENST00000513725 RXFP3Q9NSD7 469 aa13.8□□□□□ -0.2
SFXN1-210ENST00000513725 TSPY2A6NKD2 308 aa13.79□□□□□ -0.2
SFXN1-210ENST00000513725 HSPD1P10809 573 aaKnown RBP13.79□□□□□ -0.2
SFXN1-210ENST00000513725 MYCLP12524 364 aaPredicted RBP13.79□□□□□ -0.2
SFXN1-210ENST00000513725 PRKCQQ04759 706 aa13.79□□□□□ -0.2
SFXN1-210ENST00000513725 PSAPL1Q6NUJ1 521 aa13.79□□□□□ -0.2
SFXN1-210ENST00000513725 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.79□□□□□ -0.2
SFXN1-210ENST00000513725 TRIM50Q86XT4 487 aa13.79□□□□□ -0.2
SFXN1-210ENST00000513725 DDX23Q9BUQ8 820 aaKnown RBP13.79□□□□□ -0.2
SFXN1-210ENST00000513725 TMX1Q9H3N1 280 aa13.79□□□□□ -0.2
SFXN1-210ENST00000513725 ATP6V0A4Q9HBG4 840 aa13.79□□□□□ -0.2
SFXN1-210ENST00000513725 IL17RBQ9NRM6 502 aa13.79□□□□□ -0.2
SFXN1-210ENST00000513725 C1orf112Q9NSG2 853 aa13.79□□□□□ -0.2
SFXN1-210ENST00000513725 TUBE1Q9UJT0 475 aa13.79□□□□□ -0.2
SFXN1-210ENST00000513725 DENND3A2RUS2 1198 aa13.78□□□□□ -0.2
SFXN1-210ENST00000513725 NCAM2O15394 837 aa13.78□□□□□ -0.2
SFXN1-210ENST00000513725 APPP05067 770 aa13.78□□□□□ -0.2
SFXN1-210ENST00000513725 PBX3P40426 434 aa13.78□□□□□ -0.2
SFXN1-210ENST00000513725 SNW1Q13573 536 aaKnown RBP13.78□□□□□ -0.2
SFXN1-210ENST00000513725 PPP2R5DQ14738 602 aa13.78□□□□□ -0.2
SFXN1-210ENST00000513725 ZBTB41Q5SVQ8 909 aa13.78□□□□□ -0.2
SFXN1-210ENST00000513725 UTP14CQ5TAP6 766 aaKnown RBP13.78□□□□□ -0.2
SFXN1-210ENST00000513725 SLC24A5Q71RS6 500 aa13.78□□□□□ -0.2
SFXN1-210ENST00000513725 PDZD3Q86UT5 571 aa13.78□□□□□ -0.2
SFXN1-210ENST00000513725 C12orf50Q8NA57 414 aaPredicted RBP13.78□□□□□ -0.2
SFXN1-210ENST00000513725 KLHL5Q96PQ7 755 aa13.78□□□□□ -0.2
SFXN1-210ENST00000513725 LSM14BQ9BX40 385 aaKnown RBP13.78□□□□□ -0.2
SFXN1-210ENST00000513725 MRS2Q9HD23 443 aa13.78□□□□□ -0.2
SFXN1-210ENST00000513725 MTF2Q9Y483 593 aaPredicted RBP13.78□□□□□ -0.2
SFXN1-210ENST00000513725 TRPV2Q9Y5S1 764 aa13.78□□□□□ -0.2
SFXN1-210ENST00000513725 ABCB11O95342 1321 aa13.78□□□□□ -0.2
SFXN1-210ENST00000513725 IGSF9BQ9UPX0 1349 aa13.78□□□□□ -0.2
SFXN1-210ENST00000513725 NMT2O60551 498 aa13.77□□□□□ -0.21
SFXN1-210ENST00000513725 MYH7P12883 1935 aa13.77□□□□□ -0.21
SFXN1-210ENST00000513725 SPINK2P20155 84 aa13.77□□□□□ -0.21
SFXN1-210ENST00000513725 ADAMTS20P59510 1910 aa13.77□□□□□ -0.21
SFXN1-210ENST00000513725 NFX1Q12986 1120 aaKnown RBP13.77□□□□□ -0.21
SFXN1-210ENST00000513725 PPFIA1Q13136 1202 aa13.77□□□□□ -0.21
SFXN1-210ENST00000513725 SIM2Q14190 667 aaPredicted RBP13.77□□□□□ -0.21
SFXN1-210ENST00000513725 MLF2Q15773 248 aaPredicted RBP13.77□□□□□ -0.21
SFXN1-210ENST00000513725 C2orf16Q68DN1 1984 aa13.77□□□□□ -0.21
SFXN1-210ENST00000513725 RSPO2Q6UXX9 243 aaPredicted RBP13.77□□□□□ -0.21
SFXN1-210ENST00000513725 LRRC43Q8N309 656 aa13.77□□□□□ -0.21
SFXN1-210ENST00000513725 BBXQ8WY36 941 aaPredicted RBP13.77□□□□□ -0.21
SFXN1-210ENST00000513725 CLUAP1Q96AJ1 413 aa13.77□□□□□ -0.21
SFXN1-210ENST00000513725 TMEM117Q9H0C3 514 aa13.77□□□□□ -0.21
SFXN1-210ENST00000513725 BOLA2Q9H3K6 86 aa13.77□□□□□ -0.21
SFXN1-210ENST00000513725 EPB41L4AQ9HCS5 686 aaPredicted RBP13.77□□□□□ -0.21
SFXN1-210ENST00000513725 IL1RAPL2Q9NP60 686 aa13.77□□□□□ -0.21
SFXN1-210ENST00000513725 RGS18Q9NS28 235 aa13.77□□□□□ -0.21
SFXN1-210ENST00000513725 LAMA5O15230 3695 aa13.77□□□□□ -0.21
SFXN1-210ENST00000513725 COL4A3Q01955 1670 aa13.76□□□□□ -0.21
SFXN1-210ENST00000513725 IFIT2P09913 472 aaKnown RBP13.76□□□□□ -0.21
SFXN1-210ENST00000513725 CT47B1P0C2W7 299 aaPredicted RBP13.76□□□□□ -0.21
SFXN1-210ENST00000513725 FGFR1P11362 822 aa13.76□□□□□ -0.21
SFXN1-210ENST00000513725 GNAT2P19087 354 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms