RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 BANK1Q8NDB2 785 aa9.24□□□□□ -0.93
RNF4-220ENST00000513578 GOLGA5Q8TBA6 731 aa9.24□□□□□ -0.93
RNF4-220ENST00000513578 MORC4Q8TE76 937 aa9.24□□□□□ -0.93
RNF4-220ENST00000513578 ZFP91Q96JP5 570 aaPredicted RBP9.24□□□□□ -0.93
RNF4-220ENST00000513578 PURBQ96QR8 312 aaKnown RBP9.24□□□□□ -0.93
RNF4-220ENST00000513578 MPHOSPH6Q99547 160 aaKnown RBP9.24□□□□□ -0.93
RNF4-220ENST00000513578 DNAJC7Q99615 494 aa9.24□□□□□ -0.93
RNF4-220ENST00000513578 MKNK1Q9BUB5 465 aa9.24□□□□□ -0.93
RNF4-220ENST00000513578 FGFBP2Q9BYJ0 223 aa9.24□□□□□ -0.93
RNF4-220ENST00000513578 NDST4Q9H3R1 872 aa9.24□□□□□ -0.93
RNF4-220ENST00000513578 MROH8Q9H579 483 aa9.24□□□□□ -0.93
RNF4-220ENST00000513578 MRPL44Q9H9J2 332 aaKnown RBP9.24□□□□□ -0.93
RNF4-220ENST00000513578 CGNQ9P2M7 1197 aaKnown RBP9.24□□□□□ -0.93
RNF4-220ENST00000513578 RBPJLQ9UBG7 517 aa9.24□□□□□ -0.93
RNF4-220ENST00000513578 PNMA3Q9UL41 463 aa9.24□□□□□ -0.93
RNF4-220ENST00000513578 PCDHB13Q9Y5F0 798 aa9.24□□□□□ -0.93
RNF4-220ENST00000513578 PLXNB2O15031 1838 aa9.24□□□□□ -0.93
RNF4-220ENST00000513578 DNAJC25-GNG10A0A024R161 153 aa9.23□□□□□ -0.93
RNF4-220ENST00000513578 SOWAHBA6NEL2 793 aa9.23□□□□□ -0.93
RNF4-220ENST00000513578 RSPH10B2B2RC85 870 aa9.23□□□□□ -0.93
RNF4-220ENST00000513578 POTEB2H3BUK9 544 aa9.23□□□□□ -0.93
RNF4-220ENST00000513578 DDX39AO00148 427 aaKnown RBP9.23□□□□□ -0.93
RNF4-220ENST00000513578 STBD1O95210 358 aa9.23□□□□□ -0.93
RNF4-220ENST00000513578 PSAPP07602 524 aa9.23□□□□□ -0.93
RNF4-220ENST00000513578 RSPH10BP0C881 870 aa9.23□□□□□ -0.93
RNF4-220ENST00000513578 TGFB3P10600 412 aa9.23□□□□□ -0.93
RNF4-220ENST00000513578 SCP2P22307 547 aa9.23□□□□□ -0.93
RNF4-220ENST00000513578 HNRNPH3P31942 346 aaKnown RBP9.23□□□□□ -0.93
RNF4-220ENST00000513578 YWHABP31946 246 aaKnown RBP9.23□□□□□ -0.93
RNF4-220ENST00000513578 FXR1P51114 621 aaKnown RBP eCLIP9.23□□□□□ -0.93
RNF4-220ENST00000513578 CASP5P51878 434 aa9.23□□□□□ -0.93
RNF4-220ENST00000513578 RTP1P59025 263 aa9.23□□□□□ -0.93
RNF4-220ENST00000513578 ZBED6P86452 979 aa9.23□□□□□ -0.93
RNF4-220ENST00000513578 ADAM9Q13443 819 aa9.23□□□□□ -0.93
RNF4-220ENST00000513578 EAPPQ56P03 285 aaPredicted RBP9.23□□□□□ -0.93
RNF4-220ENST00000513578 CEP135Q66GS9 1140 aa9.23□□□□□ -0.93
RNF4-220ENST00000513578 KCNV1Q6PIU1 500 aa9.23□□□□□ -0.93
RNF4-220ENST00000513578 ABHD15Q6UXT9 468 aa9.23□□□□□ -0.93
RNF4-220ENST00000513578 MOB2Q70IA6 237 aa9.23□□□□□ -0.93
RNF4-220ENST00000513578 OTUD6AQ7L8S5 288 aa9.23□□□□□ -0.93
RNF4-220ENST00000513578 SLC9A9Q8IVB4 645 aa9.23□□□□□ -0.93
RNF4-220ENST00000513578 C12orf56Q8IXR9 622 aa9.23□□□□□ -0.93
RNF4-220ENST00000513578 DAW1Q8N136 415 aa9.23□□□□□ -0.93
RNF4-220ENST00000513578 MYCT1Q8N699 235 aa9.23□□□□□ -0.93
RNF4-220ENST00000513578 OR8K1Q8NGG5 319 aa9.23□□□□□ -0.93
RNF4-220ENST00000513578 ATP6V0A1Q93050 837 aa9.23□□□□□ -0.93
RNF4-220ENST00000513578 HVCN1Q96D96 273 aa9.23□□□□□ -0.93
RNF4-220ENST00000513578 SLC10A4Q96EP9 437 aa9.23□□□□□ -0.93
RNF4-220ENST00000513578 PPP1R13BQ96KQ4 1090 aa9.23□□□□□ -0.93
RNF4-220ENST00000513578 DRC1Q96MC2 740 aa9.23□□□□□ -0.93
RNF4-220ENST00000513578 ZHX3Q9H4I2 956 aa9.23□□□□□ -0.93
RNF4-220ENST00000513578 C17orf75Q9HAS0 396 aa9.23□□□□□ -0.93
RNF4-220ENST00000513578 METTL14Q9HCE5 456 aaKnown RBP9.23□□□□□ -0.93
RNF4-220ENST00000513578 JPH1Q9HDC5 661 aaPredicted RBP9.23□□□□□ -0.93
RNF4-220ENST00000513578 ABHD10Q9NUJ1 306 aa9.23□□□□□ -0.93
RNF4-220ENST00000513578 TBC1D7Q9P0N9 293 aa9.23□□□□□ -0.93
RNF4-220ENST00000513578 LARSQ9P2J5 1176 aaKnown RBP9.23□□□□□ -0.93
RNF4-220ENST00000513578 SLC9A2Q9UBY0 812 aa9.23□□□□□ -0.93
RNF4-220ENST00000513578 KCNG1Q9UIX4 513 aa9.23□□□□□ -0.93
RNF4-220ENST00000513578 SIK3Q9Y2K2 1263 aa9.23□□□□□ -0.93
RNF4-220ENST00000513578 LUC7L2Q9Y383 392 aaKnown RBP9.23□□□□□ -0.93
RNF4-220ENST00000513578 PAXBP1Q9Y5B6 917 aa9.23□□□□□ -0.93
RNF4-220ENST00000513578 SIP14410 1827 aa9.23□□□□□ -0.93
RNF4-220ENST00000513578 ASTN1O14525 1302 aa9.23□□□□□ -0.93
RNF4-220ENST00000513578 IGKV6D-21A0A0A0MT36 114 aa9.22□□□□□ -0.93
RNF4-220ENST00000513578 TTC26A0AVF1 554 aa9.22□□□□□ -0.93
RNF4-220ENST00000513578 RASSF10A6NK89 507 aa9.22□□□□□ -0.93
RNF4-220ENST00000513578 USP27XA6NNY8 438 aa9.22□□□□□ -0.93
RNF4-220ENST00000513578 ZBTB39O15060 712 aa9.22□□□□□ -0.93
RNF4-220ENST00000513578 TGFB1I1O43294 461 aa9.22□□□□□ -0.93
RNF4-220ENST00000513578 HIP1RO75146 1068 aa9.22□□□□□ -0.93
RNF4-220ENST00000513578 PRPF6O94906 941 aaKnown RBP9.22□□□□□ -0.93
RNF4-220ENST00000513578 GCNT3O95395 438 aa9.22□□□□□ -0.93
RNF4-220ENST00000513578 MYBP10242 640 aa9.22□□□□□ -0.93
RNF4-220ENST00000513578 CETPP11597 493 aa9.22□□□□□ -0.93
RNF4-220ENST00000513578 PLS3P13797 630 aa9.22□□□□□ -0.93
RNF4-220ENST00000513578 TNNT1P13805 278 aa9.22□□□□□ -0.93
RNF4-220ENST00000513578 ABCD1P33897 745 aa9.22□□□□□ -0.93
RNF4-220ENST00000513578 KRT9P35527 623 aa9.22□□□□□ -0.93
RNF4-220ENST00000513578 GJA5P36382 358 aa9.22□□□□□ -0.93
RNF4-220ENST00000513578 RAD51AP2Q09MP3 1159 aa9.22□□□□□ -0.93
RNF4-220ENST00000513578 SYCP1Q15431 976 aa9.22□□□□□ -0.93
RNF4-220ENST00000513578 PTPN14Q15678 1187 aa9.22□□□□□ -0.93
RNF4-220ENST00000513578 MEA1Q16626 185 aa9.22□□□□□ -0.93
RNF4-220ENST00000513578 PTPN21Q16825 1174 aa9.22□□□□□ -0.93
RNF4-220ENST00000513578 DNTTIP2Q5QJE6 756 aaKnown RBP9.22□□□□□ -0.93
RNF4-220ENST00000513578 MIS18BP1Q6P0N0 1132 aa9.22□□□□□ -0.93
RNF4-220ENST00000513578 CYP26C1Q6V0L0 522 aa9.22□□□□□ -0.93
RNF4-220ENST00000513578 ANKRD23Q86SG2 305 aa9.22□□□□□ -0.93
RNF4-220ENST00000513578 NCAPG2Q86XI2 1143 aa9.22□□□□□ -0.93
RNF4-220ENST00000513578 REXO1L1PQ8IX06 675 aa9.22□□□□□ -0.93
RNF4-220ENST00000513578 NELFCDQ8IXH7 590 aa9.22□□□□□ -0.93
RNF4-220ENST00000513578 FAM178BQ8IXR5 827 aa9.22□□□□□ -0.93
RNF4-220ENST00000513578 ZNF526Q8TF50 670 aaPredicted RBP9.22□□□□□ -0.93
RNF4-220ENST00000513578 TMEM206Q9H813 350 aa9.22□□□□□ -0.93
RNF4-220ENST00000513578 PDLIM7Q9NR12 457 aa9.22□□□□□ -0.93
RNF4-220ENST00000513578 DMAC2Q9NW81 257 aa9.22□□□□□ -0.93
RNF4-220ENST00000513578 PKD2L1Q9P0L9 805 aa9.22□□□□□ -0.93
RNF4-220ENST00000513578 SAMM50Q9Y512 469 aa9.22□□□□□ -0.93
RNF4-220ENST00000513578 PPME1Q9Y570 386 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms