RNA–Protein interactions for RNA: ENST00000513538.1

TCOF1-212, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-212ENST00000513538 FAM102BQ5T8I3 360 aa11.02□□□□□ -0.65
TCOF1-212ENST00000513538 PLPPR4Q7Z2D5 763 aa11.02□□□□□ -0.65
TCOF1-212ENST00000513538 MICU3Q86XE3 530 aa11.02□□□□□ -0.65
TCOF1-212ENST00000513538 KIAA0319LQ8IZA0 1049 aa11.02□□□□□ -0.65
TCOF1-212ENST00000513538 SUSD6Q92537 303 aa11.02□□□□□ -0.65
TCOF1-212ENST00000513538 TMEM87BQ96K49 555 aa11.02□□□□□ -0.65
TCOF1-212ENST00000513538 ANO3Q9BYT9 981 aa11.02□□□□□ -0.65
TCOF1-212ENST00000513538 AGO4Q9HCK5 861 aaKnown RBP11.02□□□□□ -0.65
TCOF1-212ENST00000513538 TMEM260Q9NX78 707 aa11.02□□□□□ -0.65
TCOF1-212ENST00000513538 PLXNA3P51805 1871 aa11.02□□□□□ -0.65
TCOF1-212ENST00000513538 CACNA1HO95180 2353 aa11.01□□□□□ -0.65
TCOF1-212ENST00000513538 C9IYK1 514 aa11.01□□□□□ -0.65
TCOF1-212ENST00000513538 M0QZ92 97 aa11.01□□□□□ -0.65
TCOF1-212ENST00000513538 DDX39AO00148 427 aaKnown RBP11.01□□□□□ -0.65
TCOF1-212ENST00000513538 FSCN2O14926 492 aa11.01□□□□□ -0.65
TCOF1-212ENST00000513538 FGF18O76093 207 aa11.01□□□□□ -0.65
TCOF1-212ENST00000513538 RPLP2P05387 115 aaKnown RBP11.01□□□□□ -0.65
TCOF1-212ENST00000513538 VCPP55072 806 aaKnown RBP11.01□□□□□ -0.65
TCOF1-212ENST00000513538 APOBRQ0VD83 1088 aa11.01□□□□□ -0.65
TCOF1-212ENST00000513538 KCNC3Q14003 757 aa11.01□□□□□ -0.65
TCOF1-212ENST00000513538 SGMS1Q86VZ5 419 aa11.01□□□□□ -0.65
TCOF1-212ENST00000513538 FAM228AQ86W67 206 aa11.01□□□□□ -0.65
TCOF1-212ENST00000513538 CCDC60Q8IWA6 550 aaPredicted RBP11.01□□□□□ -0.65
TCOF1-212ENST00000513538 FANCBQ8NB91 859 aa11.01□□□□□ -0.65
TCOF1-212ENST00000513538 PPP2R3CQ969Q6 453 aa11.01□□□□□ -0.65
TCOF1-212ENST00000513538 PBXIP1Q96AQ6 731 aa11.01□□□□□ -0.65
TCOF1-212ENST00000513538 PPP1R16BQ96T49 567 aa11.01□□□□□ -0.65
TCOF1-212ENST00000513538 ADAM2Q99965 735 aa11.01□□□□□ -0.65
TCOF1-212ENST00000513538 SDF4Q9BRK5 362 aa11.01□□□□□ -0.65
TCOF1-212ENST00000513538 AZI2Q9H6S1 392 aa11.01□□□□□ -0.65
TCOF1-212ENST00000513538 TLE6Q9H808 572 aa11.01□□□□□ -0.65
TCOF1-212ENST00000513538 TLR9Q9NR96 1032 aa11.01□□□□□ -0.65
TCOF1-212ENST00000513538 RNF19AQ9NV58 838 aa11.01□□□□□ -0.65
TCOF1-212ENST00000513538 CDH22Q9UJ99 828 aa11.01□□□□□ -0.65
TCOF1-212ENST00000513538 LRFN2Q9ULH4 789 aa11.01□□□□□ -0.65
TCOF1-212ENST00000513538 GINS2Q9Y248 185 aa11.01□□□□□ -0.65
TCOF1-212ENST00000513538 TBKBP1A7MCY6 615 aa11□□□□□ -0.65
TCOF1-212ENST00000513538 MEIS1O00470 390 aa11□□□□□ -0.65
TCOF1-212ENST00000513538 DHX15O43143 795 aaKnown RBP11□□□□□ -0.65
TCOF1-212ENST00000513538 CALM1P0DP23 149 aa11□□□□□ -0.65
TCOF1-212ENST00000513538 CALM2P0DP24 149 aa11□□□□□ -0.65
TCOF1-212ENST00000513538 CALM3P0DP25 149 aa11□□□□□ -0.65
TCOF1-212ENST00000513538 FGFR1P11362 822 aa11□□□□□ -0.65
TCOF1-212ENST00000513538 ATP4AP20648 1035 aa11□□□□□ -0.65
TCOF1-212ENST00000513538 KLRC1P26715 233 aa11□□□□□ -0.65
TCOF1-212ENST00000513538 NECTIN1Q15223 517 aa11□□□□□ -0.65
TCOF1-212ENST00000513538 DUSP6Q16828 381 aa11□□□□□ -0.65
TCOF1-212ENST00000513538 CEP55Q53EZ4 464 aa11□□□□□ -0.65
TCOF1-212ENST00000513538 CREB3L3Q68CJ9 461 aa11□□□□□ -0.65
TCOF1-212ENST00000513538 ABHD15Q6UXT9 468 aa11□□□□□ -0.65
TCOF1-212ENST00000513538 NME8Q8N427 588 aa11□□□□□ -0.65
TCOF1-212ENST00000513538 COLGALT1Q8NBJ5 622 aa11□□□□□ -0.65
TCOF1-212ENST00000513538 ASIC4Q96FT7 647 aa11□□□□□ -0.65
TCOF1-212ENST00000513538 RPGRIP1Q96KN7 1286 aa11□□□□□ -0.65
TCOF1-212ENST00000513538 PHF7Q9BWX1 381 aaPredicted RBP11□□□□□ -0.65
TCOF1-212ENST00000513538 CWH43Q9H720 699 aa11□□□□□ -0.65
TCOF1-212ENST00000513538 RIC8AQ9NPQ8 531 aa11□□□□□ -0.65
TCOF1-212ENST00000513538 RGS18Q9NS28 235 aa11□□□□□ -0.65
TCOF1-212ENST00000513538 TYW1Q9NV66 732 aaKnown RBP11□□□□□ -0.65
TCOF1-212ENST00000513538 ST3GAL5Q9UNP4 418 aa11□□□□□ -0.65
TCOF1-212ENST00000513538 PCDHB7Q9Y5E2 793 aa11□□□□□ -0.65
TCOF1-212ENST00000513538 SLC12A7Q9Y666 1083 aa11□□□□□ -0.65
TCOF1-212ENST00000513538 MYO10Q9HD67 2058 aa11□□□□□ -0.65
TCOF1-212ENST00000513538 IGLV3-22A0A075B6J6 115 aa10.99□□□□□ -0.65
TCOF1-212ENST00000513538 FAM86B1E9PN63 330 aa10.99□□□□□ -0.65
TCOF1-212ENST00000513538 RPS6KA5O75582 802 aa10.99□□□□□ -0.65
TCOF1-212ENST00000513538 C22orf31O95567 290 aa10.99□□□□□ -0.65
TCOF1-212ENST00000513538 FAM86B2P0C5J1 330 aa10.99□□□□□ -0.65
TCOF1-212ENST00000513538 SREBF1P36956 1147 aa10.99□□□□□ -0.65
TCOF1-212ENST00000513538 CLK2P49760 499 aaKnown RBP10.99□□□□□ -0.65
TCOF1-212ENST00000513538 NAPAP54920 295 aa10.99□□□□□ -0.65
TCOF1-212ENST00000513538 FAM189BP81408 668 aa10.99□□□□□ -0.65
TCOF1-212ENST00000513538 UBE3AQ05086 875 aa10.99□□□□□ -0.65
TCOF1-212ENST00000513538 DSC3Q14574 896 aa10.99□□□□□ -0.65
TCOF1-212ENST00000513538 SYCE2Q6PIF2 218 aa10.99□□□□□ -0.65
TCOF1-212ENST00000513538 LRRC55Q6ZSA7 311 aa10.99□□□□□ -0.65
TCOF1-212ENST00000513538 SLC24A5Q71RS6 500 aa10.99□□□□□ -0.65
TCOF1-212ENST00000513538 TMTC2Q8N394 836 aa10.99□□□□□ -0.65
TCOF1-212ENST00000513538 FBXL6Q8N531 539 aa10.99□□□□□ -0.65
TCOF1-212ENST00000513538 MICAL1Q8TDZ2 1067 aa10.99□□□□□ -0.65
TCOF1-212ENST00000513538 CRYGNQ8WXF5 182 aa10.99□□□□□ -0.65
TCOF1-212ENST00000513538 TCEANC2Q96MN5 208 aa10.99□□□□□ -0.65
TCOF1-212ENST00000513538 OSMRQ99650 979 aa10.99□□□□□ -0.65
TCOF1-212ENST00000513538 APOL5Q9BWW9 433 aa10.99□□□□□ -0.65
TCOF1-212ENST00000513538 S1PR5Q9H228 398 aa10.99□□□□□ -0.65
TCOF1-212ENST00000513538 FAM86C1Q9NVL1 165 aa10.99□□□□□ -0.65
TCOF1-212ENST00000513538 BRPF3Q9ULD4 1205 aa10.99□□□□□ -0.65
TCOF1-212ENST00000513538 PCDHB12Q9Y5F1 795 aa10.99□□□□□ -0.65
TCOF1-212ENST00000513538 COL1A2P08123 1366 aa10.99□□□□□ -0.65
TCOF1-212ENST00000513538 HIDE1A8MVS5 230 aa10.98□□□□□ -0.65
TCOF1-212ENST00000513538 BACH1O14867 736 aa10.98□□□□□ -0.65
TCOF1-212ENST00000513538 HBP1O60381 514 aa10.98□□□□□ -0.65
TCOF1-212ENST00000513538 GPR32O75388 356 aa10.98□□□□□ -0.65
TCOF1-212ENST00000513538 PDGFBP01127 241 aaPredicted RBP10.98□□□□□ -0.65
TCOF1-212ENST00000513538 VTNP04004 478 aa10.98□□□□□ -0.65
TCOF1-212ENST00000513538 ATF7P17544 494 aaPredicted RBP10.98□□□□□ -0.65
TCOF1-212ENST00000513538 SP100P23497 879 aaPredicted RBP10.98□□□□□ -0.65
TCOF1-212ENST00000513538 PBX3P40426 434 aa10.98□□□□□ -0.65
TCOF1-212ENST00000513538 SLC26A2P50443 739 aa10.98□□□□□ -0.65
TCOF1-212ENST00000513538 ADCY7P51828 1080 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms