RNA–Protein interactions for RNA: ENST00000513452.5

CLDND1-227, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-227ENST00000513452 MTHFRP42898 656 aa12.07□□□□□ -0.48
CLDND1-227ENST00000513452 KRT76Q01546 638 aa12.07□□□□□ -0.48
CLDND1-227ENST00000513452 ITIH3Q06033 890 aa12.07□□□□□ -0.48
CLDND1-227ENST00000513452 FNDC1Q4ZHG4 1894 aaPredicted RBP12.07□□□□□ -0.48
CLDND1-227ENST00000513452 RARS2Q5T160 578 aaKnown RBP12.07□□□□□ -0.48
CLDND1-227ENST00000513452 USP17L6PQ6QN14 398 aa12.07□□□□□ -0.48
CLDND1-227ENST00000513452 SMARCC2Q8TAQ2 1214 aa12.07□□□□□ -0.48
CLDND1-227ENST00000513452 KRT23Q9C075 422 aa12.07□□□□□ -0.48
CLDND1-227ENST00000513452 RIOX1Q9H6W3 641 aa12.07□□□□□ -0.48
CLDND1-227ENST00000513452 CWH43Q9H720 699 aa12.07□□□□□ -0.48
CLDND1-227ENST00000513452 NGRNQ9NPE2 291 aaKnown RBP12.07□□□□□ -0.48
CLDND1-227ENST00000513452 PCDHB15Q9Y5E8 787 aa12.07□□□□□ -0.48
CLDND1-227ENST00000513452 HCFC2Q9Y5Z7 792 aa12.07□□□□□ -0.48
CLDND1-227ENST00000513452 CYTH3O43739 400 aa12.06□□□□□ -0.48
CLDND1-227ENST00000513452 LMNAP02545 664 aaKnown RBP12.06□□□□□ -0.48
CLDND1-227ENST00000513452 CA8P35219 290 aa12.06□□□□□ -0.48
CLDND1-227ENST00000513452 PLCB3Q01970 1234 aa12.06□□□□□ -0.48
CLDND1-227ENST00000513452 GRM4Q14833 912 aa12.06□□□□□ -0.48
CLDND1-227ENST00000513452 SEC23AQ15436 765 aa12.06□□□□□ -0.48
CLDND1-227ENST00000513452 ANKRD45Q5TZF3 282 aa12.06□□□□□ -0.48
CLDND1-227ENST00000513452 XRRA1Q6P2D8 792 aa12.06□□□□□ -0.48
CLDND1-227ENST00000513452 TMC7Q7Z402 723 aa12.06□□□□□ -0.48
CLDND1-227ENST00000513452 ZDHHC14Q8IZN3 488 aa12.06□□□□□ -0.48
CLDND1-227ENST00000513452 DTWD2Q8NBA8 298 aa12.06□□□□□ -0.48
CLDND1-227ENST00000513452 CUL5Q93034 780 aa12.06□□□□□ -0.48
CLDND1-227ENST00000513452 RILPL2Q969X0 211 aa12.06□□□□□ -0.48
CLDND1-227ENST00000513452 GPRASP2Q96D09 838 aa12.06□□□□□ -0.48
CLDND1-227ENST00000513452 CNTNAP3BQ96NU0 1288 aa12.06□□□□□ -0.48
CLDND1-227ENST00000513452 PCYT2Q99447 389 aa12.06□□□□□ -0.48
CLDND1-227ENST00000513452 HINFPQ9BQA5 517 aa12.06□□□□□ -0.48
CLDND1-227ENST00000513452 CNTNAP3Q9BZ76 1288 aa12.06□□□□□ -0.48
CLDND1-227ENST00000513452 ATP6V0A4Q9HBG4 840 aa12.06□□□□□ -0.48
CLDND1-227ENST00000513452 ERVK-5Q9HDB9 667 aa12.06□□□□□ -0.48
CLDND1-227ENST00000513452 C1orf112Q9NSG2 853 aa12.06□□□□□ -0.48
CLDND1-227ENST00000513452 PCDHA2Q9Y5H9 948 aa12.06□□□□□ -0.48
CLDND1-227ENST00000513452 DMXL1Q9Y485 3027 aa12.06□□□□□ -0.48
CLDND1-227ENST00000513452 KDM3AQ9Y4C1 1321 aa12.06□□□□□ -0.48
CLDND1-227ENST00000513452 DNAH14Q0VDD8 3507 aa12.06□□□□□ -0.48
CLDND1-227ENST00000513452 WDR87Q6ZQQ6 2873 aa12.05□□□□□ -0.48
CLDND1-227ENST00000513452 C9IYK1 514 aa12.05□□□□□ -0.48
CLDND1-227ENST00000513452 RPS6KA5O75582 802 aa12.05□□□□□ -0.48
CLDND1-227ENST00000513452 NPR3P17342 541 aa12.05□□□□□ -0.48
CLDND1-227ENST00000513452 ITGB5P18084 799 aa12.05□□□□□ -0.48
CLDND1-227ENST00000513452 PUM1Q14671 1186 aaKnown RBP eCLIP12.05□□□□□ -0.48
CLDND1-227ENST00000513452 SMC1AQ14683 1233 aaKnown RBP12.05□□□□□ -0.48
CLDND1-227ENST00000513452 PLCB4Q15147 1175 aa12.05□□□□□ -0.48
CLDND1-227ENST00000513452 IMMTQ16891 758 aaKnown RBP12.05□□□□□ -0.48
CLDND1-227ENST00000513452 KCNT2Q6UVM3 1135 aa12.05□□□□□ -0.48
CLDND1-227ENST00000513452 SLC24A5Q71RS6 500 aa12.05□□□□□ -0.48
CLDND1-227ENST00000513452 TICAM2Q86XR7 235 aa12.05□□□□□ -0.48
CLDND1-227ENST00000513452 SIX5Q8N196 739 aa12.05□□□□□ -0.48
CLDND1-227ENST00000513452 C12orf76Q8N812 135 aaPredicted RBP12.05□□□□□ -0.48
CLDND1-227ENST00000513452 TMEM40Q8WWA1 233 aa12.05□□□□□ -0.48
CLDND1-227ENST00000513452 CDHR1Q96JP9 859 aa12.05□□□□□ -0.48
CLDND1-227ENST00000513452 ZNF558Q96NG5 402 aa12.05□□□□□ -0.48
CLDND1-227ENST00000513452 AZI2Q9H6S1 392 aa12.05□□□□□ -0.48
CLDND1-227ENST00000513452 CNNM2Q9H8M5 875 aa12.05□□□□□ -0.48
CLDND1-227ENST00000513452 RGS18Q9NS28 235 aa12.05□□□□□ -0.48
CLDND1-227ENST00000513452 TMEM161AQ9NX61 479 aa12.05□□□□□ -0.48
CLDND1-227ENST00000513452 DBR1Q9UK59 544 aaKnown RBP12.05□□□□□ -0.48
CLDND1-227ENST00000513452 FBXL21Q9UKT6 434 aa12.05□□□□□ -0.48
CLDND1-227ENST00000513452 NOC2LQ9Y3T9 749 aaKnown RBP12.05□□□□□ -0.48
CLDND1-227ENST00000513452 R4GN57 208 aa12.05□□□□□ -0.48
CLDND1-227ENST00000513452 LOXHD1Q8IVV2 1947 aa12.05□□□□□ -0.48
CLDND1-227ENST00000513452 SMIM35A0A1B0GVV1 85 aa12.04□□□□□ -0.48
CLDND1-227ENST00000513452 C2orf71A6NGG8 1288 aa12.04□□□□□ -0.48
CLDND1-227ENST00000513452 CLASP2O75122 1294 aaKnown RBP12.04□□□□□ -0.48
CLDND1-227ENST00000513452 EOMESO95936 686 aa12.04□□□□□ -0.48
CLDND1-227ENST00000513452 SDSP20132 328 aa12.04□□□□□ -0.48
CLDND1-227ENST00000513452 PPM1AP35813 382 aa12.04□□□□□ -0.48
CLDND1-227ENST00000513452 KRT17Q04695 432 aa12.04□□□□□ -0.48
CLDND1-227ENST00000513452 MTMR1Q13613 665 aa12.04□□□□□ -0.48
CLDND1-227ENST00000513452 KIAA1841Q6NSI8 718 aa12.04□□□□□ -0.48
CLDND1-227ENST00000513452 KANK3Q6NY19 840 aa12.04□□□□□ -0.48
CLDND1-227ENST00000513452 MTHFD1LQ6UB35 978 aa12.04□□□□□ -0.48
CLDND1-227ENST00000513452 CYB5R4Q7L1T6 521 aa12.04□□□□□ -0.48
CLDND1-227ENST00000513452 LRRC43Q8N309 656 aa12.04□□□□□ -0.48
CLDND1-227ENST00000513452 PLCD3Q8N3E9 789 aa12.04□□□□□ -0.48
CLDND1-227ENST00000513452 CYP2W1Q8TAV3 490 aa12.04□□□□□ -0.48
CLDND1-227ENST00000513452 PPP1R16BQ96T49 567 aa12.04□□□□□ -0.48
CLDND1-227ENST00000513452 RTP3Q9BQQ7 232 aa12.04□□□□□ -0.48
CLDND1-227ENST00000513452 CDHR5Q9HBB8 845 aa12.04□□□□□ -0.48
CLDND1-227ENST00000513452 JPH1Q9HDC5 661 aaPredicted RBP12.04□□□□□ -0.48
CLDND1-227ENST00000513452 ST3GAL5Q9UNP4 418 aa12.04□□□□□ -0.48
CLDND1-227ENST00000513452 KMT2BQ9UMN6 2715 aaPredicted RBP12.04□□□□□ -0.48
CLDND1-227ENST00000513452 MYO10Q9HD67 2058 aa12.04□□□□□ -0.48
CLDND1-227ENST00000513452 CEP250Q9BV73 2442 aa12.03□□□□□ -0.48
CLDND1-227ENST00000513452 MEIS2O14770 477 aa12.03□□□□□ -0.48
CLDND1-227ENST00000513452 CWC27Q6UX04 472 aaKnown RBP12.03□□□□□ -0.48
CLDND1-227ENST00000513452 LRRC55Q6ZSA7 311 aa12.03□□□□□ -0.48
CLDND1-227ENST00000513452 NME8Q8N427 588 aa12.03□□□□□ -0.48
CLDND1-227ENST00000513452 MRPL43Q8N983 215 aaKnown RBP12.03□□□□□ -0.48
CLDND1-227ENST00000513452 TNPO1Q92973 898 aaKnown RBP12.03□□□□□ -0.48
CLDND1-227ENST00000513452 TMEM117Q9H0C3 514 aa12.03□□□□□ -0.48
CLDND1-227ENST00000513452 SEMA4AQ9H3S1 761 aa12.03□□□□□ -0.48
CLDND1-227ENST00000513452 CYP26B1Q9NR63 512 aa12.03□□□□□ -0.48
CLDND1-227ENST00000513452 DZANK1Q9NVP4 752 aa12.03□□□□□ -0.48
CLDND1-227ENST00000513452 SPG21Q9NZD8 308 aa12.03□□□□□ -0.48
CLDND1-227ENST00000513452 USTQ9Y2C2 406 aa12.03□□□□□ -0.48
CLDND1-227ENST00000513452 BAZ2BQ9UIF8 2168 aaKnown RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms