RNA–Protein interactions for RNA: ENST00000513433.1

SNX25-206, Transcript of sorting nexin 25, humanhuman

TSL 3

Gene SNX25, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-206ENST00000513433 GRIA2P42262 883 aa6.65□□□□□ -1.34
SNX25-206ENST00000513433 KCNJ6P48051 423 aa6.65□□□□□ -1.34
SNX25-206ENST00000513433 PPP2R2AP63151 447 aa6.65□□□□□ -1.34
SNX25-206ENST00000513433 MEX3CQ5U5Q3 659 aaKnown RBP6.65□□□□□ -1.34
SNX25-206ENST00000513433 KCTD13Q8WZ19 329 aa6.65□□□□□ -1.34
SNX25-206ENST00000513433 SGSM3Q96HU1 749 aa6.65□□□□□ -1.34
SNX25-206ENST00000513433 LOXL4Q96JB6 756 aa6.65□□□□□ -1.34
SNX25-206ENST00000513433 TINF2Q9BSI4 451 aa6.65□□□□□ -1.34
SNX25-206ENST00000513433 YIPF4Q9BSR8 244 aa6.65□□□□□ -1.34
SNX25-206ENST00000513433 ZNF408Q9H9D4 720 aa6.65□□□□□ -1.34
SNX25-206ENST00000513433 CD248Q9HCU0 757 aa6.65□□□□□ -1.34
SNX25-206ENST00000513433 SLC6A20Q9NP91 592 aa6.65□□□□□ -1.34
SNX25-206ENST00000513433 MYOTQ9UBF9 498 aa6.65□□□□□ -1.34
SNX25-206ENST00000513433 DCCP43146 1447 aa6.65□□□□□ -1.35
SNX25-206ENST00000513433 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.64□□□□□ -1.35
SNX25-206ENST00000513433 DLX3O60479 287 aa6.64□□□□□ -1.35
SNX25-206ENST00000513433 CHGBP05060 677 aa6.64□□□□□ -1.35
SNX25-206ENST00000513433 GNL2Q13823 731 aaKnown RBP6.64□□□□□ -1.35
SNX25-206ENST00000513433 NBPF8Q3BBV2 869 aa6.64□□□□□ -1.35
SNX25-206ENST00000513433 HABP4Q5JVS0 413 aaKnown RBP6.64□□□□□ -1.35
SNX25-206ENST00000513433 TRIM48Q8IWZ4 208 aa6.64□□□□□ -1.35
SNX25-206ENST00000513433 KLHL36Q8N4N3 616 aa6.64□□□□□ -1.35
SNX25-206ENST00000513433 GMLQ99445 158 aa6.64□□□□□ -1.35
SNX25-206ENST00000513433 TMEM168Q9H0V1 697 aa6.64□□□□□ -1.35
SNX25-206ENST00000513433 EIF3AQ14152 1382 aaKnown RBP6.64□□□□□ -1.35
SNX25-206ENST00000513433 ADGRL3Q9HAR2 1447 aa6.64□□□□□ -1.35
SNX25-206ENST00000513433 CDK12Q9NYV4 1490 aaPredicted RBP6.64□□□□□ -1.35
SNX25-206ENST00000513433 LRP5O75197 1615 aa6.64□□□□□ -1.35
SNX25-206ENST00000513433 ZXDAP98168 799 aa6.63□□□□□ -1.35
SNX25-206ENST00000513433 CDSNQ15517 529 aa6.63□□□□□ -1.35
SNX25-206ENST00000513433 PRAMEF18Q5VWM3 479 aa6.63□□□□□ -1.35
SNX25-206ENST00000513433 GLB1LQ6UWU2 654 aa6.63□□□□□ -1.35
SNX25-206ENST00000513433 MCF2L2Q86YR7 1114 aa6.63□□□□□ -1.35
SNX25-206ENST00000513433 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.63□□□□□ -1.35
SNX25-206ENST00000513433 KRTAP9-8Q9BYQ0 159 aa6.63□□□□□ -1.35
SNX25-206ENST00000513433 L2HGDHQ9H9P8 463 aa6.63□□□□□ -1.35
SNX25-206ENST00000513433 FMN2Q9NZ56 1722 aa6.63□□□□□ -1.35
SNX25-206ENST00000513433 SBNO2Q9Y2G9 1366 aa6.63□□□□□ -1.35
SNX25-206ENST00000513433 TSC22D4Q9Y3Q8 395 aa6.63□□□□□ -1.35
SNX25-206ENST00000513433 ITSN1Q15811 1721 aa6.62□□□□□ -1.35
SNX25-206ENST00000513433 TOPAZ1Q8N9V7 1692 aa6.62□□□□□ -1.35
SNX25-206ENST00000513433 TMEM94Q12767 1356 aa6.62□□□□□ -1.35
SNX25-206ENST00000513433 AGRPO00253 132 aa6.62□□□□□ -1.35
SNX25-206ENST00000513433 KRIT1O00522 736 aa6.62□□□□□ -1.35
SNX25-206ENST00000513433 MSCO60682 206 aa6.62□□□□□ -1.35
SNX25-206ENST00000513433 PPP2CBP62714 309 aa6.62□□□□□ -1.35
SNX25-206ENST00000513433 PPP2CAP67775 309 aa6.62□□□□□ -1.35
SNX25-206ENST00000513433 LIMS2Q7Z4I7 341 aa6.62□□□□□ -1.35
SNX25-206ENST00000513433 DTX3Q8N9I9 347 aa6.62□□□□□ -1.35
SNX25-206ENST00000513433 SLC43A3Q8NBI5 491 aa6.62□□□□□ -1.35
SNX25-206ENST00000513433 ZFYVE21Q9BQ24 234 aa6.62□□□□□ -1.35
SNX25-206ENST00000513433 ADAM29Q9UKF5 820 aa6.62□□□□□ -1.35
SNX25-206ENST00000513433 GPR42O15529 346 aa6.61□□□□□ -1.35
SNX25-206ENST00000513433 CYP1A1P04798 512 aaPredicted RBP6.61□□□□□ -1.35
SNX25-206ENST00000513433 FGFR1P11362 822 aa6.61□□□□□ -1.35
SNX25-206ENST00000513433 ARID5AQ03989 594 aa6.61□□□□□ -1.35
SNX25-206ENST00000513433 OTOP3Q7RTS5 596 aa6.61□□□□□ -1.35
SNX25-206ENST00000513433 CHAMP1Q96JM3 812 aa6.61□□□□□ -1.35
SNX25-206ENST00000513433 TULP4Q9NRJ4 1543 aa6.6□□□□□ -1.35
SNX25-206ENST00000513433 MSH6P52701 1360 aa6.6□□□□□ -1.35
SNX25-206ENST00000513433 USP47Q96K76 1375 aa6.6□□□□□ -1.35
SNX25-206ENST00000513433 PLEKHH1Q9ULM0 1364 aa6.6□□□□□ -1.35
SNX25-206ENST00000513433 ZNF536O15090 1300 aa6.6□□□□□ -1.35
SNX25-206ENST00000513433 KLF4O43474 513 aa6.6□□□□□ -1.35
SNX25-206ENST00000513433 AKAP8O43823 692 aaKnown RBP6.6□□□□□ -1.35
SNX25-206ENST00000513433 KLHL18O94889 574 aa6.6□□□□□ -1.35
SNX25-206ENST00000513433 TCF3P15923 654 aa6.6□□□□□ -1.35
SNX25-206ENST00000513433 EPHA5P54756 1037 aa6.6□□□□□ -1.35
SNX25-206ENST00000513433 NFATC3Q12968 1075 aa6.6□□□□□ -1.35
SNX25-206ENST00000513433 ICAM4Q14773 271 aa6.6□□□□□ -1.35
SNX25-206ENST00000513433 DDR2Q16832 855 aa6.6□□□□□ -1.35
SNX25-206ENST00000513433 KBTBD2Q8IY47 623 aa6.6□□□□□ -1.35
SNX25-206ENST00000513433 CELF2-AS1Q8N7Q2 184 aa6.6□□□□□ -1.35
SNX25-206ENST00000513433 UHMK1Q8TAS1 419 aaKnown RBP6.6□□□□□ -1.35
SNX25-206ENST00000513433 PIP4K2CQ8TBX8 421 aa6.6□□□□□ -1.35
SNX25-206ENST00000513433 IGDCC4Q8TDY8 1250 aa6.6□□□□□ -1.35
SNX25-206ENST00000513433 DCAF4Q8WV16 495 aa6.6□□□□□ -1.35
SNX25-206ENST00000513433 CLEC4DQ8WXI8 215 aa6.6□□□□□ -1.35
SNX25-206ENST00000513433 ZSWIM3Q96MP5 696 aa6.6□□□□□ -1.35
SNX25-206ENST00000513433 IER2Q9BTL4 223 aa6.6□□□□□ -1.35
SNX25-206ENST00000513433 DLL4Q9NR61 685 aa6.6□□□□□ -1.35
SNX25-206ENST00000513433 FTSJ1Q9UET6 329 aa6.6□□□□□ -1.35
SNX25-206ENST00000513433 KIF1AQ12756 1690 aa6.6□□□□□ -1.35
SNX25-206ENST00000513433 USP32Q8NFA0 1604 aa6.6□□□□□ -1.35
SNX25-206ENST00000513433 PATE3B3GLJ2 98 aa6.59□□□□□ -1.35
SNX25-206ENST00000513433 HSP90AA2PQ14568 343 aaPredicted RBP6.59□□□□□ -1.35
SNX25-206ENST00000513433 SLFN13Q68D06 897 aa6.59□□□□□ -1.35
SNX25-206ENST00000513433 LBX2Q6XYB7 198 aa6.59□□□□□ -1.35
SNX25-206ENST00000513433 CHST13Q8NET6 341 aa6.59□□□□□ -1.35
SNX25-206ENST00000513433 ZNF669Q96BR6 464 aaPredicted RBP6.59□□□□□ -1.35
SNX25-206ENST00000513433 PHF20Q9BVI0 1012 aa6.59□□□□□ -1.35
SNX25-206ENST00000513433 CARD11Q9BXL7 1154 aa6.59□□□□□ -1.35
SNX25-206ENST00000513433 ATP7BP35670 1465 aa6.59□□□□□ -1.36
SNX25-206ENST00000513433 MST1RQ04912 1400 aa6.59□□□□□ -1.36
SNX25-206ENST00000513433 ANKARQ7Z5J8 1434 aa6.59□□□□□ -1.36
SNX25-206ENST00000513433 ROBO1Q9Y6N7 1651 aa6.58□□□□□ -1.36
SNX25-206ENST00000513433 JCADQ9P266 1359 aa6.58□□□□□ -1.36
SNX25-206ENST00000513433 NHSL1Q5SYE7 1610 aa6.58□□□□□ -1.36
SNX25-206ENST00000513433 CENPJQ9HC77 1338 aaPredicted RBP6.58□□□□□ -1.36
SNX25-206ENST00000513433 NPEPPSL1A6NEC2 478 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms