RNA–Protein interactions for RNA: ENST00000513321.1

NEIL3-202, Transcript of nei like DNA glycosylase 3, humanhuman

TSL 1 (best)

Gene NEIL3, Length 1,528 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL3-202ENST00000513321 MUTP22033 750 aa23.5■■□□□ 1.35
NEIL3-202ENST00000513321 UBA7P41226 1012 aa23.5■■□□□ 1.35
NEIL3-202ENST00000513321 NPEPPSP55786 919 aa23.5■■□□□ 1.35
NEIL3-202ENST00000513321 ZRSR1Q15695 479 aaKnown RBP23.5■■□□□ 1.35
NEIL3-202ENST00000513321 SPECC1Q5M775 1068 aa23.5■■□□□ 1.35
NEIL3-202ENST00000513321 MTHFD1LQ6UB35 978 aa23.5■■□□□ 1.35
NEIL3-202ENST00000513321 NACC1Q96RE7 527 aa23.5■■□□□ 1.35
NEIL3-202ENST00000513321 PRKAG2Q9UGJ0 569 aa23.5■■□□□ 1.35
NEIL3-202ENST00000513321 KIAA1024Q9UPX6 916 aa23.5■■□□□ 1.35
NEIL3-202ENST00000513321 WDR81Q562E7 1941 aa23.5■■□□□ 1.35
NEIL3-202ENST00000513321 MYH15Q9Y2K3 1946 aa23.5■■□□□ 1.35
NEIL3-202ENST00000513321 XRCC6P12956 609 aaKnown RBP eCLIP23.49■■□□□ 1.35
NEIL3-202ENST00000513321 CABP7Q86V35 215 aa23.49■■□□□ 1.35
NEIL3-202ENST00000513321 ZNF579Q8NAF0 562 aaKnown RBP23.49■■□□□ 1.35
NEIL3-202ENST00000513321 DHX38Q92620 1227 aaKnown RBP23.49■■□□□ 1.35
NEIL3-202ENST00000513321 CEP170P1Q96L14 293 aa23.49■■□□□ 1.35
NEIL3-202ENST00000513321 CYP26B1Q9NR63 512 aa23.49■■□□□ 1.35
NEIL3-202ENST00000513321 ANKEF1Q9NU02 776 aa23.49■■□□□ 1.35
NEIL3-202ENST00000513321 ZMYND8Q9ULU4 1186 aaPredicted RBP23.49■■□□□ 1.35
NEIL3-202ENST00000513321 PCDHA2Q9Y5H9 948 aa23.49■■□□□ 1.35
NEIL3-202ENST00000513321 SYN1P17600 705 aa23.49■■□□□ 1.35
NEIL3-202ENST00000513321 XKR9Q5GH70 373 aa23.49■■□□□ 1.35
NEIL3-202ENST00000513321 RUFY4Q6ZNE9 571 aa23.49■■□□□ 1.35
NEIL3-202ENST00000513321 USP49Q70CQ1 688 aa23.49■■□□□ 1.35
NEIL3-202ENST00000513321 LEO1Q8WVC0 666 aaPredicted RBP23.49■■□□□ 1.35
NEIL3-202ENST00000513321 WNT8BQ93098 351 aa23.49■■□□□ 1.35
NEIL3-202ENST00000513321 EPSTI1Q96J88 318 aa23.49■■□□□ 1.35
NEIL3-202ENST00000513321 SPATA32Q96LK8 384 aa23.49■■□□□ 1.35
NEIL3-202ENST00000513321 CEP89Q96ST8 783 aa23.49■■□□□ 1.35
NEIL3-202ENST00000513321 NOC4LQ9BVI4 516 aaKnown RBP23.49■■□□□ 1.35
NEIL3-202ENST00000513321 HIPK3Q9H422 1215 aa23.49■■□□□ 1.35
NEIL3-202ENST00000513321 DDX19AQ9NUU7 478 aaKnown RBP23.49■■□□□ 1.35
NEIL3-202ENST00000513321 MAGEB2O15479 319 aa23.48■■□□□ 1.35
NEIL3-202ENST00000513321 C22orf31O95567 290 aa23.48■■□□□ 1.35
NEIL3-202ENST00000513321 ME1P48163 572 aa23.48■■□□□ 1.35
NEIL3-202ENST00000513321 TBC1D8BQ0IIM8 1120 aa23.48■■□□□ 1.35
NEIL3-202ENST00000513321 PLIN2Q99541 437 aa23.48■■□□□ 1.35
NEIL3-202ENST00000513321 PPP1R12CQ9BZL4 782 aa23.48■■□□□ 1.35
NEIL3-202ENST00000513321 SCAND2PQ9GZW5 306 aaPredicted RBP23.48■■□□□ 1.35
NEIL3-202ENST00000513321 CUTAO60888 179 aa23.47■■□□□ 1.35
NEIL3-202ENST00000513321 RAG1P15918 1043 aa23.47■■□□□ 1.35
NEIL3-202ENST00000513321 GRB10Q13322 594 aa23.47■■□□□ 1.35
NEIL3-202ENST00000513321 BFSP2Q13515 415 aa23.47■■□□□ 1.35
NEIL3-202ENST00000513321 TRIM71Q2Q1W2 868 aaKnown RBP23.47■■□□□ 1.35
NEIL3-202ENST00000513321 HYIQ5T013 277 aa23.47■■□□□ 1.35
NEIL3-202ENST00000513321 TAF2Q6P1X5 1199 aa23.47■■□□□ 1.35
NEIL3-202ENST00000513321 SYMPKQ92797 1274 aaKnown RBP23.47■■□□□ 1.35
NEIL3-202ENST00000513321 CDK5RAP3Q96JB5 506 aa23.47■■□□□ 1.35
NEIL3-202ENST00000513321 PNMA5Q96PV4 448 aa23.47■■□□□ 1.35
NEIL3-202ENST00000513321 CCSER1Q9C0I3 900 aa23.47■■□□□ 1.35
NEIL3-202ENST00000513321 PCDH10Q9P2E7 1040 aa23.47■■□□□ 1.35
NEIL3-202ENST00000513321 PCDHA7Q9UN72 937 aa23.47■■□□□ 1.35
NEIL3-202ENST00000513321 KAT6AQ92794 2004 aa23.47■■□□□ 1.35
NEIL3-202ENST00000513321 TRIP12Q14669 1992 aaPredicted RBP23.46■■□□□ 1.35
NEIL3-202ENST00000513321 SLC26A4O43511 780 aa23.46■■□□□ 1.35
NEIL3-202ENST00000513321 TIMP1P01033 207 aa23.46■■□□□ 1.35
NEIL3-202ENST00000513321 ITGB8P26012 769 aa23.46■■□□□ 1.35
NEIL3-202ENST00000513321 CYP2C18P33260 490 aa23.46■■□□□ 1.35
NEIL3-202ENST00000513321 RARRES1P49788 294 aa23.46■■□□□ 1.35
NEIL3-202ENST00000513321 AXDND1Q5T1B0 1012 aaPredicted RBP23.46■■□□□ 1.35
NEIL3-202ENST00000513321 CCDC155Q8N6L0 562 aa23.46■■□□□ 1.35
NEIL3-202ENST00000513321 METTL13Q8N6R0 699 aa23.46■■□□□ 1.35
NEIL3-202ENST00000513321 CAGE1Q8TC20 777 aa23.46■■□□□ 1.35
NEIL3-202ENST00000513321 DNAJB3Q8WWF6 145 aa23.46■■□□□ 1.35
NEIL3-202ENST00000513321 CALML4Q96GE6 196 aa23.46■■□□□ 1.35
NEIL3-202ENST00000513321 FAM49AQ9H0Q0 323 aaPredicted RBP23.46■■□□□ 1.35
NEIL3-202ENST00000513321 DBR1Q9UK59 544 aaKnown RBP23.46■■□□□ 1.35
NEIL3-202ENST00000513321 DNM3Q9UQ16 869 aa23.46■■□□□ 1.35
NEIL3-202ENST00000513321 UMODL1Q5DID0 1318 aa23.46■■□□□ 1.35
NEIL3-202ENST00000513321 KDM3AQ9Y4C1 1321 aa23.46■■□□□ 1.35
NEIL3-202ENST00000513321 SMIM35A0A1B0GVV1 85 aa23.45■■□□□ 1.34
NEIL3-202ENST00000513321 THPOP40225 353 aa23.45■■□□□ 1.34
NEIL3-202ENST00000513321 KARSQ15046 597 aaKnown RBP23.45■■□□□ 1.34
NEIL3-202ENST00000513321 EFCAB12Q6NXP0 572 aa23.45■■□□□ 1.34
NEIL3-202ENST00000513321 RETREG2Q8NC44 543 aa23.45■■□□□ 1.34
NEIL3-202ENST00000513321 CCDC43Q96MW1 224 aaKnown RBP23.45■■□□□ 1.34
NEIL3-202ENST00000513321 NT5C3AQ9H0P0 336 aa23.45■■□□□ 1.34
NEIL3-202ENST00000513321 SUGCTQ9HAC7 445 aa23.45■■□□□ 1.34
NEIL3-202ENST00000513321 PPME1Q9Y570 386 aa23.45■■□□□ 1.34
NEIL3-202ENST00000513321 E9PMD0 336 aa23.44■■□□□ 1.34
NEIL3-202ENST00000513321 MAFO75444 373 aaPredicted RBP23.44■■□□□ 1.34
NEIL3-202ENST00000513321 CKBP12277 381 aa23.44■■□□□ 1.34
NEIL3-202ENST00000513321 KCNK18Q7Z418 384 aa23.44■■□□□ 1.34
NEIL3-202ENST00000513321 KIAA0319LQ8IZA0 1049 aa23.44■■□□□ 1.34
NEIL3-202ENST00000513321 RASSF8Q8NHQ8 419 aa23.44■■□□□ 1.34
NEIL3-202ENST00000513321 GDPD2Q9HCC8 539 aa23.44■■□□□ 1.34
NEIL3-202ENST00000513321 H0YGN5 161 aa23.43■■□□□ 1.34
NEIL3-202ENST00000513321 PITPNM1O00562 1244 aa23.43■■□□□ 1.34
NEIL3-202ENST00000513321 TXLNAP40222 546 aa23.43■■□□□ 1.34
NEIL3-202ENST00000513321 RFC5P40937 340 aa23.43■■□□□ 1.34
NEIL3-202ENST00000513321 POLGP54098 1239 aaPredicted RBP23.43■■□□□ 1.34
NEIL3-202ENST00000513321 RBL2Q08999 1139 aa23.43■■□□□ 1.34
NEIL3-202ENST00000513321 TMEM119Q4V9L6 283 aa23.43■■□□□ 1.34
NEIL3-202ENST00000513321 RPAINQ86UA6 219 aa23.43■■□□□ 1.34
NEIL3-202ENST00000513321 RSPH3Q86UC2 560 aa23.43■■□□□ 1.34
NEIL3-202ENST00000513321 LRRC71Q8N4P6 559 aa23.43■■□□□ 1.34
NEIL3-202ENST00000513321 KCTD17Q8N5Z5 321 aa23.43■■□□□ 1.34
NEIL3-202ENST00000513321 SLC7A3Q8WY07 619 aa23.43■■□□□ 1.34
NEIL3-202ENST00000513321 BHMT2Q9H2M3 363 aa23.43■■□□□ 1.34
NEIL3-202ENST00000513321 DHX33Q9H6R0 707 aaKnown RBP23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms