RNA–Protein interactions for RNA: ENST00000513016.5

VCAN-209, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 8,483 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-209ENST00000513016 ORC4O43929 436 aa4.58□□□□□ -1.68
VCAN-209ENST00000513016 HBP1O60381 514 aa4.58□□□□□ -1.68
VCAN-209ENST00000513016 MMP1P03956 469 aa4.58□□□□□ -1.68
VCAN-209ENST00000513016 GTF2H3Q13889 308 aa4.58□□□□□ -1.68
VCAN-209ENST00000513016 CTTNQ14247 550 aaKnown RBP4.58□□□□□ -1.68
VCAN-209ENST00000513016 RBBP5Q15291 538 aaKnown RBP4.58□□□□□ -1.68
VCAN-209ENST00000513016 ME3Q16798 604 aa4.58□□□□□ -1.68
VCAN-209ENST00000513016 PADI6Q6TGC4 694 aa4.58□□□□□ -1.68
VCAN-209ENST00000513016 RPUSD2Q8IZ73 545 aaKnown RBP4.58□□□□□ -1.68
VCAN-209ENST00000513016 STMN2Q93045 179 aa4.58□□□□□ -1.68
VCAN-209ENST00000513016 KIAA1468Q9P260 1216 aa4.58□□□□□ -1.68
VCAN-209ENST00000513016 SLC13A4Q9UKG4 626 aa4.58□□□□□ -1.68
VCAN-209ENST00000513016 AXIN2Q9Y2T1 843 aa4.58□□□□□ -1.68
VCAN-209ENST00000513016 PLA2R1Q13018 1463 aa4.58□□□□□ -1.68
VCAN-209ENST00000513016 GPC4O75487 556 aa4.58□□□□□ -1.68
VCAN-209ENST00000513016 TCP1P17987 556 aaKnown RBP4.58□□□□□ -1.68
VCAN-209ENST00000513016 ZNF699Q32M78 642 aa4.58□□□□□ -1.68
VCAN-209ENST00000513016 TMTC3Q6ZXV5 915 aa4.58□□□□□ -1.68
VCAN-209ENST00000513016 CNPY4Q8N129 248 aa4.58□□□□□ -1.68
VCAN-209ENST00000513016 OSBP2Q969R2 916 aa4.58□□□□□ -1.68
VCAN-209ENST00000513016 PGBD1Q96JS3 809 aa4.58□□□□□ -1.68
VCAN-209ENST00000513016 FAM84BQ96KN1 310 aaPredicted RBP4.58□□□□□ -1.68
VCAN-209ENST00000513016 ASNSD1Q9NWL6 643 aa4.58□□□□□ -1.68
VCAN-209ENST00000513016 IPPQ9Y573 584 aa4.58□□□□□ -1.68
VCAN-209ENST00000513016 MAD1L1Q9Y6D9 718 aa4.58□□□□□ -1.68
VCAN-209ENST00000513016 RFX7Q2KHR2 1363 aa4.58□□□□□ -1.68
VCAN-209ENST00000513016 KIF1BO60333 1816 aa4.58□□□□□ -1.68
VCAN-209ENST00000513016 TMEM247A6NEH6 219 aa4.57□□□□□ -1.68
VCAN-209ENST00000513016 UBE2Q2LH0YL09 131 aa4.57□□□□□ -1.68
VCAN-209ENST00000513016 MEIS1O00470 390 aa4.57□□□□□ -1.68
VCAN-209ENST00000513016 RGL2O15211 777 aa4.57□□□□□ -1.68
VCAN-209ENST00000513016 LRG1P02750 347 aa4.57□□□□□ -1.68
VCAN-209ENST00000513016 PMLP29590 882 aa4.57□□□□□ -1.68
VCAN-209ENST00000513016 LRRC63Q05C16 580 aa4.57□□□□□ -1.68
VCAN-209ENST00000513016 SLC39A14Q15043 492 aa4.57□□□□□ -1.68
VCAN-209ENST00000513016 ENOSF1Q7L5Y1 443 aa4.57□□□□□ -1.68
VCAN-209ENST00000513016 HDXQ7Z353 690 aa4.57□□□□□ -1.68
VCAN-209ENST00000513016 LINC00116Q8NCU8 138 aa4.57□□□□□ -1.68
VCAN-209ENST00000513016 APPL2Q8NEU8 664 aa4.57□□□□□ -1.68
VCAN-209ENST00000513016 SOCS4Q8WXH5 440 aa4.57□□□□□ -1.68
VCAN-209ENST00000513016 MRRFQ96E11 262 aaKnown RBP4.57□□□□□ -1.68
VCAN-209ENST00000513016 ASIC4Q96FT7 647 aa4.57□□□□□ -1.68
VCAN-209ENST00000513016 TMEM169Q96HH4 297 aa4.57□□□□□ -1.68
VCAN-209ENST00000513016 VPS39Q96JC1 886 aa4.57□□□□□ -1.68
VCAN-209ENST00000513016 CNOT6LQ96LI5 555 aaKnown RBP4.57□□□□□ -1.68
VCAN-209ENST00000513016 TSSK1BQ9BXA7 367 aa4.57□□□□□ -1.68
VCAN-209ENST00000513016 NUF2Q9BZD4 464 aa4.57□□□□□ -1.68
VCAN-209ENST00000513016 ANTXR1Q9H6X2 564 aa4.57□□□□□ -1.68
VCAN-209ENST00000513016 DCP1AQ9NPI6 582 aaPredicted RBP4.57□□□□□ -1.68
VCAN-209ENST00000513016 TLK1Q9UKI8 766 aa4.57□□□□□ -1.68
VCAN-209ENST00000513016 SLC4A7Q9Y6M7 1214 aa4.57□□□□□ -1.68
VCAN-209ENST00000513016 PASKQ96RG2 1323 aa4.57□□□□□ -1.68
VCAN-209ENST00000513016 TET3O43151 1660 aa4.57□□□□□ -1.68
VCAN-209ENST00000513016 GPR182O15218 404 aa4.57□□□□□ -1.68
VCAN-209ENST00000513016 CAMTA2O94983 1202 aa4.57□□□□□ -1.68
VCAN-209ENST00000513016 ZNF853P0CG23 659 aa4.57□□□□□ -1.68
VCAN-209ENST00000513016 ALDH1A3P47895 512 aa4.57□□□□□ -1.68
VCAN-209ENST00000513016 SEMA3FQ13275 785 aa4.57□□□□□ -1.68
VCAN-209ENST00000513016 NOLC1Q14978 699 aaKnown RBP eCLIP4.57□□□□□ -1.68
VCAN-209ENST00000513016 ZNF658Q5TYW1 1059 aaPredicted RBP4.57□□□□□ -1.68
VCAN-209ENST00000513016 DENND2CQ68D51 928 aa4.57□□□□□ -1.68
VCAN-209ENST00000513016 KCTD6Q8NC69 237 aa4.57□□□□□ -1.68
VCAN-209ENST00000513016 ZC3H15Q8WU90 426 aaKnown RBP4.57□□□□□ -1.68
VCAN-209ENST00000513016 PUS7LQ9H0K6 701 aaKnown RBP4.57□□□□□ -1.68
VCAN-209ENST00000513016 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.57□□□□□ -1.68
VCAN-209ENST00000513016 PIN4Q9Y237 131 aaKnown RBP4.57□□□□□ -1.68
VCAN-209ENST00000513016 SH3BP1Q9Y3L3 701 aa4.57□□□□□ -1.68
VCAN-209ENST00000513016 GAS2O43903 313 aaKnown RBP4.57□□□□□ -1.68
VCAN-209ENST00000513016 GGPS1O95749 300 aa4.57□□□□□ -1.68
VCAN-209ENST00000513016 PREPLQ4J6C6 727 aaPredicted RBP4.57□□□□□ -1.68
VCAN-209ENST00000513016 RWDD4Q6NW29 188 aaKnown RBP4.57□□□□□ -1.68
VCAN-209ENST00000513016 KLHL7Q8IXQ5 586 aa4.57□□□□□ -1.68
VCAN-209ENST00000513016 ZNF34Q8IZ26 560 aa4.57□□□□□ -1.68
VCAN-209ENST00000513016 CALCOCO1Q9P1Z2 691 aa4.57□□□□□ -1.68
VCAN-209ENST00000513016 SUCLA2Q9P2R7 463 aaPredicted RBP4.57□□□□□ -1.68
VCAN-209ENST00000513016 ADCY10Q96PN6 1610 aa4.57□□□□□ -1.68
VCAN-209ENST00000513016 CXCL11O14625 94 aa4.57□□□□□ -1.68
VCAN-209ENST00000513016 TTI1O43156 1089 aa4.57□□□□□ -1.68
VCAN-209ENST00000513016 CPP00450 1065 aa4.57□□□□□ -1.68
VCAN-209ENST00000513016 KRT1P04264 644 aa4.57□□□□□ -1.68
VCAN-209ENST00000513016 STX1BP61266 288 aa4.57□□□□□ -1.68
VCAN-209ENST00000513016 PDE1BQ01064 536 aa4.57□□□□□ -1.68
VCAN-209ENST00000513016 PRKCQQ04759 706 aa4.57□□□□□ -1.68
VCAN-209ENST00000513016 ACCSLQ4AC99 568 aa4.57□□□□□ -1.68
VCAN-209ENST00000513016 SYT10Q6XYQ8 523 aa4.57□□□□□ -1.68
VCAN-209ENST00000513016 RAPH1Q70E73 1250 aa4.57□□□□□ -1.68
VCAN-209ENST00000513016 ARHGAP18Q8N392 663 aa4.57□□□□□ -1.68
VCAN-209ENST00000513016 XXYLT1Q8NBI6 393 aa4.57□□□□□ -1.68
VCAN-209ENST00000513016 HVCN1Q96D96 273 aa4.57□□□□□ -1.68
VCAN-209ENST00000513016 FOPNLQ96NB1 174 aa4.57□□□□□ -1.68
VCAN-209ENST00000513016 MSRAQ9UJ68 235 aa4.57□□□□□ -1.68
VCAN-209ENST00000513016 C17orf102A2RUQ5 167 aa4.57□□□□□ -1.68
VCAN-209ENST00000513016 TMCC1O94876 653 aa4.57□□□□□ -1.68
VCAN-209ENST00000513016 UPP2O95045 317 aa4.57□□□□□ -1.68
VCAN-209ENST00000513016 SNAP25P60880 206 aa4.57□□□□□ -1.68
VCAN-209ENST00000513016 WASHC5Q12768 1159 aa4.57□□□□□ -1.68
VCAN-209ENST00000513016 MCM6Q14566 821 aa4.57□□□□□ -1.68
VCAN-209ENST00000513016 QRICH1Q2TAL8 776 aa4.57□□□□□ -1.68
VCAN-209ENST00000513016 TTC13Q8NBP0 860 aa4.57□□□□□ -1.68
VCAN-209ENST00000513016 NKX2-3Q8TAU0 364 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms