RNA–Protein interactions for RNA: ENST00000512844.5

CHD1-209, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 848 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-209ENST00000512844 SMC1BQ8NDV3 1235 aa7.53□□□□□ -1.2
CHD1-209ENST00000512844 FEZF2Q8TBJ5 459 aa7.53□□□□□ -1.2
CHD1-209ENST00000512844 ZCCHC14Q8WYQ9 949 aaKnown RBP7.53□□□□□ -1.2
CHD1-209ENST00000512844 TUBGCP5Q96RT8 1024 aa7.53□□□□□ -1.2
CHD1-209ENST00000512844 ELF4Q99607 663 aaPredicted RBP7.53□□□□□ -1.2
CHD1-209ENST00000512844 FOXB1Q99853 325 aa7.53□□□□□ -1.2
CHD1-209ENST00000512844 OR10A5Q9H207 317 aa7.53□□□□□ -1.2
CHD1-209ENST00000512844 ZDHHC9Q9Y397 364 aa7.53□□□□□ -1.2
CHD1-209ENST00000512844 RASSF10A6NK89 507 aa7.52□□□□□ -1.21
CHD1-209ENST00000512844 CUTAO60888 179 aa7.52□□□□□ -1.21
CHD1-209ENST00000512844 DNAJC6O75061 913 aa7.52□□□□□ -1.21
CHD1-209ENST00000512844 FKBP9O95302 570 aa7.52□□□□□ -1.21
CHD1-209ENST00000512844 IL18BPO95998 194 aa7.52□□□□□ -1.21
CHD1-209ENST00000512844 KNG1P01042 644 aa7.52□□□□□ -1.21
CHD1-209ENST00000512844 APEX1P27695 318 aaKnown RBP7.52□□□□□ -1.21
CHD1-209ENST00000512844 CANXP27824 592 aaKnown RBP7.52□□□□□ -1.21
CHD1-209ENST00000512844 STRN3Q13033 797 aa7.52□□□□□ -1.21
CHD1-209ENST00000512844 RTP5Q14D33 572 aa7.52□□□□□ -1.21
CHD1-209ENST00000512844 PRAMEF9Q5VWM5 478 aa7.52□□□□□ -1.21
CHD1-209ENST00000512844 FKBP9P1Q75LS8 142 aa7.52□□□□□ -1.21
CHD1-209ENST00000512844 PLEKHH3Q7Z736 793 aa7.52□□□□□ -1.21
CHD1-209ENST00000512844 UBR7Q8N806 425 aa7.52□□□□□ -1.21
CHD1-209ENST00000512844 YTHDC1Q96MU7 727 aaKnown RBP7.52□□□□□ -1.21
CHD1-209ENST00000512844 KCNC2Q96PR1 638 aa7.52□□□□□ -1.21
CHD1-209ENST00000512844 IFT22Q9H7X7 185 aa7.52□□□□□ -1.21
CHD1-209ENST00000512844 SPC25Q9HBM1 224 aa7.52□□□□□ -1.21
CHD1-209ENST00000512844 DVL2O14641 736 aa7.51□□□□□ -1.21
CHD1-209ENST00000512844 APOL3O95236 402 aa7.51□□□□□ -1.21
CHD1-209ENST00000512844 INHBBP09529 407 aa7.51□□□□□ -1.21
CHD1-209ENST00000512844 SLC6A3Q01959 620 aa7.51□□□□□ -1.21
CHD1-209ENST00000512844 ALDH6A1Q02252 535 aaKnown RBP7.51□□□□□ -1.21
CHD1-209ENST00000512844 NFATC3Q12968 1075 aa7.51□□□□□ -1.21
CHD1-209ENST00000512844 ATP13A4Q4VNC1 1196 aa7.51□□□□□ -1.21
CHD1-209ENST00000512844 SLFN12LQ6IEE8 588 aa7.51□□□□□ -1.21
CHD1-209ENST00000512844 RNF180Q86T96 592 aa7.51□□□□□ -1.21
CHD1-209ENST00000512844 PHYKPLQ8IUZ5 450 aa7.51□□□□□ -1.21
CHD1-209ENST00000512844 REXO1L1PQ8IX06 675 aa7.51□□□□□ -1.21
CHD1-209ENST00000512844 LGI4Q8N135 537 aa7.51□□□□□ -1.21
CHD1-209ENST00000512844 RPGRQ92834 1020 aaKnown RBP7.51□□□□□ -1.21
CHD1-209ENST00000512844 H2AFY2Q9P0M6 372 aaPredicted RBP7.51□□□□□ -1.21
CHD1-209ENST00000512844 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.51□□□□□ -1.21
CHD1-209ENST00000512844 FAM83GA6ND36 823 aa7.5□□□□□ -1.21
CHD1-209ENST00000512844 ZEB2O60315 1214 aa7.5□□□□□ -1.21
CHD1-209ENST00000512844 PTX3P26022 381 aaPredicted RBP7.5□□□□□ -1.21
CHD1-209ENST00000512844 POLD1P28340 1107 aa7.5□□□□□ -1.21
CHD1-209ENST00000512844 LSP1P33241 339 aa7.5□□□□□ -1.21
CHD1-209ENST00000512844 ADCY8P40145 1251 aa7.5□□□□□ -1.21
CHD1-209ENST00000512844 IL13RA1P78552 427 aa7.5□□□□□ -1.21
CHD1-209ENST00000512844 LRSAM1Q6UWE0 723 aa7.5□□□□□ -1.21
CHD1-209ENST00000512844 SPOCD1Q6ZMY3 1216 aa7.5□□□□□ -1.21
CHD1-209ENST00000512844 Q6ZUG5 572 aa7.5□□□□□ -1.21
CHD1-209ENST00000512844 FILIP1Q7Z7B0 1213 aa7.5□□□□□ -1.21
CHD1-209ENST00000512844 RALYLQ86SE5 291 aaKnown RBP7.5□□□□□ -1.21
CHD1-209ENST00000512844 NUDT10Q8NFP7 164 aa7.5□□□□□ -1.21
CHD1-209ENST00000512844 NUDT11Q96G61 164 aa7.5□□□□□ -1.21
CHD1-209ENST00000512844 MAML3Q96JK9 1138 aa7.5□□□□□ -1.21
CHD1-209ENST00000512844 AMNQ9BXJ7 453 aa7.5□□□□□ -1.21
CHD1-209ENST00000512844 APOBEC2Q9Y235 224 aaKnown RBP7.5□□□□□ -1.21
CHD1-209ENST00000512844 ST20-MTHFSA0A0A6YYL1 179 aa7.49□□□□□ -1.21
CHD1-209ENST00000512844 NOBOXO60393 691 aa7.49□□□□□ -1.21
CHD1-209ENST00000512844 BRINP1O60477 761 aa7.49□□□□□ -1.21
CHD1-209ENST00000512844 MPIG6BO95866 241 aa7.49□□□□□ -1.21
CHD1-209ENST00000512844 HMGCRP04035 888 aa7.49□□□□□ -1.21
CHD1-209ENST00000512844 DDB1Q16531 1140 aa7.49□□□□□ -1.21
CHD1-209ENST00000512844 UBXN11Q5T124 520 aa7.49□□□□□ -1.21
CHD1-209ENST00000512844 GRAMD4Q6IC98 578 aa7.49□□□□□ -1.21
CHD1-209ENST00000512844 KRT26Q7Z3Y9 468 aa7.49□□□□□ -1.21
CHD1-209ENST00000512844 FRMD5Q7Z6J6 570 aa7.49□□□□□ -1.21
CHD1-209ENST00000512844 RTN4RL1Q86UN2 441 aaPredicted RBP7.49□□□□□ -1.21
CHD1-209ENST00000512844 C16orf92Q96LL3 132 aa7.49□□□□□ -1.21
CHD1-209ENST00000512844 CARD11Q9BXL7 1154 aa7.49□□□□□ -1.21
CHD1-209ENST00000512844 SPTLC3Q9NUV7 552 aa7.49□□□□□ -1.21
CHD1-209ENST00000512844 KCNG1Q9UIX4 513 aa7.49□□□□□ -1.21
CHD1-209ENST00000512844 CADPSQ9ULU8 1353 aa7.48□□□□□ -1.21
CHD1-209ENST00000512844 A0A0G2JNJ9 132 aa7.48□□□□□ -1.21
CHD1-209ENST00000512844 OTOL1A6NHN0 477 aaPredicted RBP7.48□□□□□ -1.21
CHD1-209ENST00000512844 ULK1O75385 1050 aa7.48□□□□□ -1.21
CHD1-209ENST00000512844 KLHL18O94889 574 aa7.48□□□□□ -1.21
CHD1-209ENST00000512844 PRLP01236 227 aa7.48□□□□□ -1.21
CHD1-209ENST00000512844 COL6A1P12109 1028 aa7.48□□□□□ -1.21
CHD1-209ENST00000512844 ADCYAP1R1P41586 468 aa7.48□□□□□ -1.21
CHD1-209ENST00000512844 MEOX1P50221 254 aa7.48□□□□□ -1.21
CHD1-209ENST00000512844 KCNQ1P51787 676 aa7.48□□□□□ -1.21
CHD1-209ENST00000512844 NFKB2Q00653 900 aa7.48□□□□□ -1.21
CHD1-209ENST00000512844 CD83Q01151 205 aa7.48□□□□□ -1.21
CHD1-209ENST00000512844 LRRC32Q14392 662 aa7.48□□□□□ -1.21
CHD1-209ENST00000512844 USP10Q14694 798 aaKnown RBP7.48□□□□□ -1.21
CHD1-209ENST00000512844 STILQ15468 1287 aa7.48□□□□□ -1.21
CHD1-209ENST00000512844 SURF1Q15526 300 aa7.48□□□□□ -1.21
CHD1-209ENST00000512844 RTKN2Q8IZC4 609 aa7.48□□□□□ -1.21
CHD1-209ENST00000512844 ATL2Q8NHH9 583 aa7.48□□□□□ -1.21
CHD1-209ENST00000512844 FERMT2Q96AC1 680 aa7.48□□□□□ -1.21
CHD1-209ENST00000512844 USP36Q9P275 1121 aaKnown RBP7.48□□□□□ -1.21
CHD1-209ENST00000512844 Q9UFV3 132 aa7.48□□□□□ -1.21
CHD1-209ENST00000512844 MCM8Q9UJA3 840 aa7.48□□□□□ -1.21
CHD1-209ENST00000512844 SYNPO2Q9UMS6 1093 aa7.48□□□□□ -1.21
CHD1-209ENST00000512844 BCAR1P56945 870 aa7.47□□□□□ -1.21
CHD1-209ENST00000512844 MOGSQ13724 837 aa7.47□□□□□ -1.21
CHD1-209ENST00000512844 FBLN7Q53RD9 439 aa7.47□□□□□ -1.21
CHD1-209ENST00000512844 CREB3L3Q68CJ9 461 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms