RNA–Protein interactions for RNA: ENST00000512617.6

PVT1-202, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 383 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-202ENST00000512617 DZIP1LQ8IYY4 767 aaKnown RBP3.75□□□□□ -1.81
PVT1-202ENST00000512617 RTKN2Q8IZC4 609 aa3.75□□□□□ -1.81
PVT1-202ENST00000512617 CCDC33Q8N5R6 958 aa3.75□□□□□ -1.81
PVT1-202ENST00000512617 TRIML1Q8N9V2 468 aa3.75□□□□□ -1.81
PVT1-202ENST00000512617 CHST14Q8NCH0 376 aa3.75□□□□□ -1.81
PVT1-202ENST00000512617 EHBP1Q8NDI1 1231 aa3.75□□□□□ -1.81
PVT1-202ENST00000512617 FAM13CQ8NE31 585 aa3.75□□□□□ -1.81
PVT1-202ENST00000512617 RUFY2Q8WXA3 655 aa3.75□□□□□ -1.81
PVT1-202ENST00000512617 NXPE3Q969Y0 559 aa3.75□□□□□ -1.81
PVT1-202ENST00000512617 RRP36Q96EU6 259 aaKnown RBP3.75□□□□□ -1.81
PVT1-202ENST00000512617 CNDP2Q96KP4 475 aaKnown RBP3.75□□□□□ -1.81
PVT1-202ENST00000512617 GAS2L1Q99501 681 aaPredicted RBP3.75□□□□□ -1.81
PVT1-202ENST00000512617 GPATCH1Q9BRR8 931 aaKnown RBP3.75□□□□□ -1.81
PVT1-202ENST00000512617 DESI2Q9BSY9 194 aa3.75□□□□□ -1.81
PVT1-202ENST00000512617 CNPPD1Q9BV87 410 aa3.75□□□□□ -1.81
PVT1-202ENST00000512617 CARD10Q9BWT7 1032 aa3.75□□□□□ -1.81
PVT1-202ENST00000512617 KLHL25Q9H0H3 589 aa3.75□□□□□ -1.81
PVT1-202ENST00000512617 CLEC4MQ9H2X3 399 aaPredicted RBP3.75□□□□□ -1.81
PVT1-202ENST00000512617 GHITMQ9H3K2 345 aa3.75□□□□□ -1.81
PVT1-202ENST00000512617 H2AFY2Q9P0M6 372 aaPredicted RBP3.75□□□□□ -1.81
PVT1-202ENST00000512617 RABL2AQ9UBK7 228 aaPredicted RBP3.75□□□□□ -1.81
PVT1-202ENST00000512617 TBC1D29Q9UFV1 150 aa3.75□□□□□ -1.81
PVT1-202ENST00000512617 ITGB1BP2Q9UKP3 347 aa3.75□□□□□ -1.81
PVT1-202ENST00000512617 BLOC1S6Q9UL45 172 aa3.75□□□□□ -1.81
PVT1-202ENST00000512617 PCDHA4Q9UN74 947 aa3.75□□□□□ -1.81
PVT1-202ENST00000512617 AGTPBP1Q9UPW5 1226 aa3.75□□□□□ -1.81
PVT1-202ENST00000512617 AKT3Q9Y243 479 aa3.75□□□□□ -1.81
PVT1-202ENST00000512617 KNSTRNQ9Y448 316 aa3.75□□□□□ -1.81
PVT1-202ENST00000512617 IQGAP2Q13576 1575 aa3.75□□□□□ -1.81
PVT1-202ENST00000512617 UGGT2Q9NYU1 1516 aa3.75□□□□□ -1.81
PVT1-202ENST00000512617 KIF13AQ9H1H9 1805 aa3.74□□□□□ -1.81
PVT1-202ENST00000512617 ABCC10Q5T3U5 1492 aa3.74□□□□□ -1.81
PVT1-202ENST00000512617 PRXQ9BXM0 1461 aa3.74□□□□□ -1.81
PVT1-202ENST00000512617 RAPGEF2Q9Y4G8 1499 aa3.74□□□□□ -1.81
PVT1-202ENST00000512617 C17orf113A0A1B0GUU1 675 aa3.74□□□□□ -1.81
PVT1-202ENST00000512617 ERICH4A6NGS2 130 aa3.74□□□□□ -1.81
PVT1-202ENST00000512617 CHURC1-FNTBB4DL54 471 aa3.74□□□□□ -1.81
PVT1-202ENST00000512617 PDE2AO00408 941 aaPredicted RBP3.74□□□□□ -1.81
PVT1-202ENST00000512617 GFRA2O00451 464 aa3.74□□□□□ -1.81
PVT1-202ENST00000512617 DDX3XO00571 662 aaKnown RBP eCLIP3.74□□□□□ -1.813e-8■□□□□ 10.9
PVT1-202ENST00000512617 DOK2O60496 412 aa3.74□□□□□ -1.81
PVT1-202ENST00000512617 TBCAO75347 108 aaKnown RBP3.74□□□□□ -1.81
PVT1-202ENST00000512617 FGF18O76093 207 aa3.74□□□□□ -1.81
PVT1-202ENST00000512617 FSBPO95073 299 aa3.74□□□□□ -1.81
PVT1-202ENST00000512617 TGDSO95455 350 aa3.74□□□□□ -1.81
PVT1-202ENST00000512617 ECEL1O95672 775 aa3.74□□□□□ -1.81
PVT1-202ENST00000512617 EOMESO95936 686 aa3.74□□□□□ -1.81
PVT1-202ENST00000512617 B3GALT4O96024 378 aa3.74□□□□□ -1.81
PVT1-202ENST00000512617 ADH1CP00326 375 aa3.74□□□□□ -1.81
PVT1-202ENST00000512617 SLC4A1P02730 911 aa3.74□□□□□ -1.81
PVT1-202ENST00000512617 MT-ND3P03897 115 aa3.74□□□□□ -1.81
PVT1-202ENST00000512617 THP07101 528 aa3.74□□□□□ -1.81
PVT1-202ENST00000512617 PSAPP07602 524 aa3.74□□□□□ -1.81
PVT1-202ENST00000512617 SNRPB2P08579 225 aaKnown RBP3.74□□□□□ -1.81
PVT1-202ENST00000512617 MYF5P13349 255 aa3.74□□□□□ -1.81
PVT1-202ENST00000512617 P4HA1P13674 534 aa3.74□□□□□ -1.81
PVT1-202ENST00000512617 HOXB1P14653 301 aaPredicted RBP3.74□□□□□ -1.81
PVT1-202ENST00000512617 PDCP20941 246 aa3.74□□□□□ -1.81
PVT1-202ENST00000512617 TARSP26639 723 aaKnown RBP3.74□□□□□ -1.81
PVT1-202ENST00000512617 MC4RP32245 332 aa3.74□□□□□ -1.81
PVT1-202ENST00000512617 PHKA2P46019 1235 aa3.74□□□□□ -1.81
PVT1-202ENST00000512617 PHKA1P46020 1223 aa3.74□□□□□ -1.81
PVT1-202ENST00000512617 NOP2P46087 812 aaKnown RBP3.74□□□□□ -1.81
PVT1-202ENST00000512617 NR1H2P55055 460 aa3.74□□□□□ -1.81
PVT1-202ENST00000512617 GFRA1P56159 465 aa3.74□□□□□ -1.81
PVT1-202ENST00000512617 ARF3P61204 181 aaPredicted RBP3.74□□□□□ -1.81
PVT1-202ENST00000512617 ARF1P84077 181 aaKnown RBP3.74□□□□□ -1.81
PVT1-202ENST00000512617 ALDH6A1Q02252 535 aaKnown RBP3.74□□□□□ -1.81
PVT1-202ENST00000512617 NRG1Q02297 640 aaPredicted RBP3.74□□□□□ -1.81
PVT1-202ENST00000512617 ZNF543Q08ER8 600 aa3.74□□□□□ -1.81
PVT1-202ENST00000512617 TMED1Q13445 227 aa3.74□□□□□ -1.81
PVT1-202ENST00000512617 PMS2P11Q13670 270 aa3.74□□□□□ -1.81
PVT1-202ENST00000512617 LRP8Q14114 963 aa3.74□□□□□ -1.81
PVT1-202ENST00000512617 RASA2Q15283 850 aa3.74□□□□□ -1.81
PVT1-202ENST00000512617 SF3B3Q15393 1217 aaKnown RBP3.74□□□□□ -1.81
PVT1-202ENST00000512617 SF1Q15637 639 aaKnown RBP3.74□□□□□ -1.81
PVT1-202ENST00000512617 SMAD1Q15797 465 aaKnown RBP3.74□□□□□ -1.81
PVT1-202ENST00000512617 PFKFB4Q16877 469 aa3.74□□□□□ -1.81
PVT1-202ENST00000512617 ARL13BQ3SXY8 428 aa3.74□□□□□ -1.81
PVT1-202ENST00000512617 TMEM177Q53S58 311 aa3.74□□□□□ -1.81
PVT1-202ENST00000512617 ODF2Q5BJF6 829 aa3.74□□□□□ -1.81
PVT1-202ENST00000512617 FBXO47Q5MNV8 452 aa3.74□□□□□ -1.81
PVT1-202ENST00000512617 TMEM201Q5SNT2 666 aa3.74□□□□□ -1.81
PVT1-202ENST00000512617 COL13A1Q5TAT6 717 aaPredicted RBP3.74□□□□□ -1.81
PVT1-202ENST00000512617 LRCH2Q5VUJ6 765 aa3.74□□□□□ -1.81
PVT1-202ENST00000512617 STYK1Q6J9G0 422 aa3.74□□□□□ -1.81
PVT1-202ENST00000512617 LMBR1LQ6UX01 489 aa3.74□□□□□ -1.81
PVT1-202ENST00000512617 ADAMTSL4Q6UY14 1074 aa3.74□□□□□ -1.81
PVT1-202ENST00000512617 MPRIPQ6WCQ1 1025 aa3.74□□□□□ -1.81
PVT1-202ENST00000512617 NFXL1Q6ZNB6 911 aa3.74□□□□□ -1.81
PVT1-202ENST00000512617 ASXL2Q76L83 1435 aa3.74□□□□□ -1.81
PVT1-202ENST00000512617 DNAJB7Q7Z6W7 309 aaPredicted RBP3.74□□□□□ -1.81
PVT1-202ENST00000512617 TRIM59Q8IWR1 403 aa3.74□□□□□ -1.81
PVT1-202ENST00000512617 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.74□□□□□ -1.818e-7■■■□□ 17.1
PVT1-202ENST00000512617 CCDC144CPQ8IYA2 1237 aa3.74□□□□□ -1.81
PVT1-202ENST00000512617 PHACTR4Q8IZ21 702 aa3.74□□□□□ -1.81
PVT1-202ENST00000512617 TCP11L2Q8N4U5 519 aa3.74□□□□□ -1.81
PVT1-202ENST00000512617 EFHBQ8N7U6 833 aa3.74□□□□□ -1.81
PVT1-202ENST00000512617 KDF1Q8NAX2 398 aaPredicted RBP3.74□□□□□ -1.81
PVT1-202ENST00000512617 TOR1AIP2Q8NFQ8 470 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms