RNA–Protein interactions for RNA: ENST00000512517.1

LINC01258-201, Transcript of long intergenic non-protein coding RNA 1258, humanhuman

TSL 2 BASIC

Gene LINC01258, Length 2,059 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01258-201ENST00000512517 ZNF277Q9NRM2 450 aaPredicted RBP9.64□□□□□ -0.87
LINC01258-201ENST00000512517 UBAP1Q9NZ09 502 aa9.64□□□□□ -0.87
LINC01258-201ENST00000512517 ADAM22Q9P0K1 906 aa9.64□□□□□ -0.87
LINC01258-201ENST00000512517 DACH1Q9UI36 760 aa9.64□□□□□ -0.87
LINC01258-201ENST00000512517 PCDHA7Q9UN72 937 aa9.64□□□□□ -0.87
LINC01258-201ENST00000512517 R3HDM2Q9Y2K5 976 aaKnown RBP9.64□□□□□ -0.87
LINC01258-201ENST00000512517 BRCA1P38398 1863 aaKnown RBP9.64□□□□□ -0.87
LINC01258-201ENST00000512517 ZMYM6O95789 1325 aa9.64□□□□□ -0.87
LINC01258-201ENST00000512517 MYH1P12882 1939 aa9.64□□□□□ -0.87
LINC01258-201ENST00000512517 NAV1Q8NEY1 1877 aa9.64□□□□□ -0.87
LINC01258-201ENST00000512517 ADAMTSL1Q8N6G6 1762 aa9.64□□□□□ -0.87
LINC01258-201ENST00000512517 CCDC162PA2VCL2 907 aa9.63□□□□□ -0.87
LINC01258-201ENST00000512517 B4E1Z4 1266 aa9.63□□□□□ -0.87
LINC01258-201ENST00000512517 MMEP08473 750 aa9.63□□□□□ -0.87
LINC01258-201ENST00000512517 MYBL1P10243 752 aa9.63□□□□□ -0.87
LINC01258-201ENST00000512517 ZNF18P17022 549 aa9.63□□□□□ -0.87
LINC01258-201ENST00000512517 TGFB2P61812 414 aa9.63□□□□□ -0.87
LINC01258-201ENST00000512517 PPARAQ07869 468 aa9.63□□□□□ -0.87
LINC01258-201ENST00000512517 RCN1Q15293 331 aa9.63□□□□□ -0.87
LINC01258-201ENST00000512517 TMEM53Q6P2H8 277 aa9.63□□□□□ -0.87
LINC01258-201ENST00000512517 CERS5Q8N5B7 392 aa9.63□□□□□ -0.87
LINC01258-201ENST00000512517 CENPTQ96BT3 561 aa9.63□□□□□ -0.87
LINC01258-201ENST00000512517 LENG1Q96BZ8 264 aaPredicted RBP9.63□□□□□ -0.87
LINC01258-201ENST00000512517 CLMNQ96JQ2 1002 aa9.63□□□□□ -0.87
LINC01258-201ENST00000512517 SH3GL1Q99961 368 aa9.63□□□□□ -0.87
LINC01258-201ENST00000512517 RTFDC1Q9BY42 306 aaPredicted RBP9.63□□□□□ -0.87
LINC01258-201ENST00000512517 CNOT10Q9H9A5 744 aaKnown RBP9.63□□□□□ -0.87
LINC01258-201ENST00000512517 TMBIM4Q9HC24 238 aa9.63□□□□□ -0.87
LINC01258-201ENST00000512517 STIM2Q9P246 746 aa9.63□□□□□ -0.87
LINC01258-201ENST00000512517 LAMB1P07942 1786 aa9.63□□□□□ -0.87
LINC01258-201ENST00000512517 HTR3EA5X5Y0 456 aa9.63□□□□□ -0.87
LINC01258-201ENST00000512517 LSM1O15116 133 aaKnown RBP9.63□□□□□ -0.87
LINC01258-201ENST00000512517 CETN3O15182 167 aa9.63□□□□□ -0.87
LINC01258-201ENST00000512517 SUPT3HO75486 399 aa9.63□□□□□ -0.87
LINC01258-201ENST00000512517 YEATS4O95619 227 aa9.63□□□□□ -0.87
LINC01258-201ENST00000512517 KRT14P02533 472 aa9.63□□□□□ -0.87
LINC01258-201ENST00000512517 PDHA1P08559 390 aa9.63□□□□□ -0.87
LINC01258-201ENST00000512517 SERPINB8P50452 374 aa9.63□□□□□ -0.87
LINC01258-201ENST00000512517 PDE1BQ01064 536 aa9.63□□□□□ -0.87
LINC01258-201ENST00000512517 PLOD1Q02809 727 aaPredicted RBP9.63□□□□□ -0.87
LINC01258-201ENST00000512517 AGBL2Q5U5Z8 902 aa9.63□□□□□ -0.87
LINC01258-201ENST00000512517 CYP26C1Q6V0L0 522 aa9.63□□□□□ -0.87
LINC01258-201ENST00000512517 SPICE1Q8N0Z3 855 aa9.63□□□□□ -0.87
LINC01258-201ENST00000512517 LARGE2Q8N3Y3 721 aa9.63□□□□□ -0.87
LINC01258-201ENST00000512517 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.63□□□□□ -0.87
LINC01258-201ENST00000512517 DEPTORQ8TB45 409 aa9.63□□□□□ -0.87
LINC01258-201ENST00000512517 TGFBRAP1Q8WUH2 860 aa9.63□□□□□ -0.87
LINC01258-201ENST00000512517 SREK1Q8WXA9 508 aaKnown RBP9.63□□□□□ -0.87
LINC01258-201ENST00000512517 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.63□□□□□ -0.87
LINC01258-201ENST00000512517 DDX12PQ92771 950 aa9.63□□□□□ -0.87
LINC01258-201ENST00000512517 SNX27Q96L92 541 aa9.63□□□□□ -0.87
LINC01258-201ENST00000512517 CCDC43Q96MW1 224 aaKnown RBP9.63□□□□□ -0.87
LINC01258-201ENST00000512517 RAB17Q9H0T7 212 aa9.63□□□□□ -0.87
LINC01258-201ENST00000512517 EXOC1Q9NV70 894 aa9.63□□□□□ -0.87
LINC01258-201ENST00000512517 MCM9Q9NXL9 1143 aa9.63□□□□□ -0.87
LINC01258-201ENST00000512517 BCS1LQ9Y276 419 aa9.63□□□□□ -0.87
LINC01258-201ENST00000512517 LRCH1Q9Y2L9 728 aa9.63□□□□□ -0.87
LINC01258-201ENST00000512517 A0A1B0GTH6 734 aa9.62□□□□□ -0.87
LINC01258-201ENST00000512517 TRIM43BA6NCK2 446 aa9.62□□□□□ -0.87
LINC01258-201ENST00000512517 USP17L12C9JPN9 530 aa9.62□□□□□ -0.87
LINC01258-201ENST00000512517 USP17L21D6R901 530 aa9.62□□□□□ -0.87
LINC01258-201ENST00000512517 SMIM22K7EJ46 135 aa9.62□□□□□ -0.87
LINC01258-201ENST00000512517 ABL1P00519 1130 aa9.62□□□□□ -0.87
LINC01258-201ENST00000512517 MSH2P43246 934 aa9.62□□□□□ -0.87
LINC01258-201ENST00000512517 PEX5P50542 639 aa9.62□□□□□ -0.87
LINC01258-201ENST00000512517 MTTPP55157 894 aa9.62□□□□□ -0.87
LINC01258-201ENST00000512517 EXOSC10Q01780 885 aaKnown RBP9.62□□□□□ -0.87
LINC01258-201ENST00000512517 MCL1Q07820 350 aa9.62□□□□□ -0.87
LINC01258-201ENST00000512517 NR1I3Q14994 352 aa9.62□□□□□ -0.87
LINC01258-201ENST00000512517 PACS1Q6VY07 963 aa9.62□□□□□ -0.87
LINC01258-201ENST00000512517 MAPKAPK5Q8IW41 473 aa9.62□□□□□ -0.87
LINC01258-201ENST00000512517 IFT20Q8IY31 132 aa9.62□□□□□ -0.87
LINC01258-201ENST00000512517 MB21D2Q8IYB1 491 aaPredicted RBP9.62□□□□□ -0.87
LINC01258-201ENST00000512517 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.62□□□□□ -0.87
LINC01258-201ENST00000512517 CACTIN-AS1Q8N1I8 211 aa9.62□□□□□ -0.87
LINC01258-201ENST00000512517 SH3TC2Q8TF17 1288 aa9.62□□□□□ -0.87
LINC01258-201ENST00000512517 IFT81Q8WYA0 676 aa9.62□□□□□ -0.87
LINC01258-201ENST00000512517 NACC2Q96BF6 587 aa9.62□□□□□ -0.87
LINC01258-201ENST00000512517 CHMP6Q96FZ7 201 aa9.62□□□□□ -0.87
LINC01258-201ENST00000512517 RAB3IPQ96QF0 476 aaPredicted RBP9.62□□□□□ -0.87
LINC01258-201ENST00000512517 KRT23Q9C075 422 aa9.62□□□□□ -0.87
LINC01258-201ENST00000512517 DCP1AQ9NPI6 582 aaPredicted RBP9.62□□□□□ -0.87
LINC01258-201ENST00000512517 GPHNQ9NQX3 736 aaPredicted RBP9.62□□□□□ -0.87
LINC01258-201ENST00000512517 EFR3BQ9Y2G0 817 aa9.62□□□□□ -0.87
LINC01258-201ENST00000512517 ITIH6Q6UXX5 1313 aa9.62□□□□□ -0.87
LINC01258-201ENST00000512517 MAGEA13PA6NCF6 341 aa9.62□□□□□ -0.87
LINC01258-201ENST00000512517 USP17L3A6NCW0 530 aa9.62□□□□□ -0.87
LINC01258-201ENST00000512517 USP17L4A6NCW7 530 aa9.62□□□□□ -0.87
LINC01258-201ENST00000512517 ACTN4O43707 911 aaKnown RBP9.62□□□□□ -0.87
LINC01258-201ENST00000512517 PRDM1O75626 825 aa9.62□□□□□ -0.87
LINC01258-201ENST00000512517 UPP2O95045 317 aa9.62□□□□□ -0.87
LINC01258-201ENST00000512517 PDGFRBP09619 1106 aa9.62□□□□□ -0.87
LINC01258-201ENST00000512517 CCT8P50990 548 aa9.62□□□□□ -0.87
LINC01258-201ENST00000512517 NCALDP61601 193 aa9.62□□□□□ -0.87
LINC01258-201ENST00000512517 PPP2R2AP63151 447 aa9.62□□□□□ -0.87
LINC01258-201ENST00000512517 NSUN2Q08J23 767 aaKnown RBP eCLIP9.62□□□□□ -0.87
LINC01258-201ENST00000512517 CNPY1Q3B7I2 92 aa9.62□□□□□ -0.87
LINC01258-201ENST00000512517 FOXB2Q5VYV0 432 aa9.62□□□□□ -0.87
LINC01258-201ENST00000512517 USP17L1Q7RTZ2 530 aa9.62□□□□□ -0.87
LINC01258-201ENST00000512517 TRPM8Q7Z2W7 1104 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms